Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g00602 ATGCCTGCAACTCTAAGGAATTTCAATCTCTTTCTTTCCCCCAATATCTTCTCAATCACCCTTCTTCTTAGCATTAACTCCCTCTTCTTTCCTTGTGGTTACTCCCTTGACGAACAGGGGCAGATACTTCTTGCATGGAAAAACAGTTTAAACAGCTCGACGGAAGCTCTCAACTCATGGAATCCATCAGACCCAAGTCCATGCAACTGGTTTGGAGTCACCTGCGACAAAGGATTTGTCGTCAAAATAAGTCTCAGGTCACTGGATTTGCAGGGTTTTCTACCTTCAAATTTCCATTCTCTCAAGTTTTTGAATTCATTTACCCTCACCTCAACCAATCTTTCCGGACCAATTCCAAAAGAATTTGGAGAATATCGTGCGCTCAGCTACATTGATCTGAGCGACAATTCCATTTCAGGTGAAATCCCATACGAAATATGCAGACTACCCAAACTACAGAGTCTATACCTTAGTGGGAACTTTCTTGAAGGCGAAATTCCTTCAGATATAGGGAATATTTCAACTTTAATGCAGCTGACACTCTTTGACAATCAACTTAATGGGGAAATTCCAAAAAGCATTGGAGCACTTAGCAAACTGCAAATTTTCAGAGCTGGGGGGAACAAAAATCTGAAGGGTGAGTTGCCATGGGAGATAGGAAATTGCAGAAACTTGGTTATATTAGGCCTTGCCGAAACAAGCATTTCAGGGGCTCTCCCTTCCTCCATTGTAATGCTGAAAAGACTACAAACAATTGCCATTTACACATCTCTATTATCTGGTTCCATTCCAGAAGATATAGGAAACTGCAGCGAGCTGCAGAATCTGTACTTGTATCAGAATTCCATTTCTGGTTCAATTCCCAGAAGTTTAGGAAAGCTGAGAAAGCTTCAGAATCTTCTGCTATGGCAGAACAGCTTGGTTGGTTCAATTCCAGACGAGATTGGTTTTTGCAGAGAGCTTCTTGTTATTGACTTTTCTGAAAATTTCATCACTGGACGAATTCCAAGAAGTTTTGGGGAGCTACCCAAACTCGAAGGGCTTCAACTGAGTGTTAATCATATTTCAGGTACTATTCCATCTGAGCTCACCAATTGTACTGCTCTCACACATCTGGAAATCGATAACAATGATATTTCTGGTGGCATACCTCTTCTTATTGGCAATCTCAAGAGATTGATAATTTTCTTTGCCTGGCAGAATAATCTAACGGGTACTATTCCTGAAACTCTCGGTGATTGCCAAGAACTTCAGGCTGTTGATCTCTCTTACAACAATCTCATCGGTTCTGTTCCAAAACAGATATTTGGATTGAAAAATCTCACTAAGATCCTCCTAATTTCAAATGATTTGTCTGGCTTTATACTTCCTGATATAGGAAACTGTACAAATCTGTACAGGTTTCGGTTAAATGGAAATAGAATTGGAGGCACCGTTCCATCAGAGATCGGAAAGTTGAAAGTCCTAAATTTTGTTGATTTGAGCAGTAACCATCTTGCCGGAGAAATTACTCCGTCCATATCTGGATGTAAAAACCTCGAGTTTCTTGATCTCCATTCAAATTGGCTCACTGGGTCCGTGCCTGATAACTTGCCCACTACTCTGCGGTTTGTGGACATCTCAGACAATAGGCTGACTGGTGAGCTGTCTCATGCGATTGGGTTGTTGACTGAATTAACAAAACTCAACTTAGAAAACAACCAACTTTCCGGCAGACTTCCTGCTGAGATTCTTTCCTGCAGTAAGCTGCAACTTTTGAACGTTGGAAACAATGGCTTCTCCGGTGTAATTCCAAAGGAACTGGGTCAAATACCATCACTGGAAATCTCACTCAATCTAAGCTGTAACCAACTTTCCGGTGAGATCCCAACTCAATTTTCCGGCCTCGACAAGCTAGGAGTTCTTGACCTTTCCCGTAACCAGCTATGGGGAAACTTAAGCGTTCTTGCGCAACTTCAGAACCTTATGTCATTGAATATTTCCTTTAATGACTTCTCAGGTGAGTTGCCAGATACCCCATTTTTTCGTAACCTCCCTCTTAGTGACATCACTGGAAACAAAGGTCTGTCCCTGTCCGGAAGAGTTGTAACTCCGGCCGACAAGATGTCTTCCACCAGCAGAAGCAGATCAGTCATGAAGCTAGTAATGGCAATTCTAGCTAGTTCCAGTGCAGTACTAATCCTGCTAGGAATCTACGTGCTTTTTCGCACTCGACTCGCTAGCAAAGTTTTACGAGAAGATGACCAATGGGAGATGACTTTCTATCAAAAATTTGAATTCTCCATCAATGACATCGTGAGGAACTTAACCTCATCCAATGTAATCGGAACTGGAAGTTCTGGAGTTGTATATCGAGTAACAATTCCAAATGCAGAAACTCTAGCAGTAAAGAAAATGTGGTCATCTGAAGAATCTGGAGCCTTTACTTCCGAAATTCAGACTCTCAGTTCGATAAGGCACAAGAATATCATCCGCCTTTTGGGGTGGGGATCAAATAGGAATCTGAAGCTGCTCTTCTACGATTACCTCCCAAATGGAAGCCTCAGCTCATTACTCCATGGCGCTGGAAAAGGAGCAGAATGGGAGAGCAGATACGACATTGTTTTAGGCGTAGGTCATGCCCTGGCATACCTTCATCACGACTGTGTTCCTCCAATCATGCATGGAGATGTGAAAGCCATGAATGTGCTTCTGGGTCCTGGCTATCAACCTTACCTCGCTGATTTTGGATTAGCCAGCATTGTAGAGAGAAACGGCGGTGATGATTTCTCCAAACGTGGTCAAAGACCAAATCTCGCTGGTTCTTATGGATATATGGCTCCAGAGCACGCATCAATGCAGAGAATCACAGAGAAAAGCGACGTATACAGTTTTGGTGTAGTTCTTCTCGAGGTTCTAACAGGTCGGCATCCATTGGATCCATCATTACCTGGAGGAGCTCACCTGGTTCAATGGATTCGGGATCATTTGGCAAAAAAACGAGATCCAACAGATATTCTCGATCCAAAGCTCAGAGGAAGAGCTGATCCTACCAGCCATGAAATGGTACAAACATTGGCCGTCTCGTTCCTCTGCATAAGCAACAGAGCGCACGATCGTCCAGCGATGAAGGACGTGGTCGCGATGCTCAAGGAAATCCGCCATATCGAATCTGCGAGGCCGGAACTTGACATTTCCAAGGGCGAATTGACGGCGATTCAATCACCGCCGGCGGCTCGGGATGTGGAGTTCCGAGGATCCTCTAACTGCTCCTTTGCATTTTCGGATGACTCTATTATATAA 3282 43.42 MPATLRNFNLFLSPNIFSITLLLSINSLFFPCGYSLDEQGQILLAWKNSLNSSTEALNSWNPSDPSPCNWFGVTCDKGFVVKISLRSLDLQGFLPSNFHSLKFLNSFTLTSTNLSGPIPKEFGEYRALSYIDLSDNSISGEIPYEICRLPKLQSLYLSGNFLEGEIPSDIGNISTLMQLTLFDNQLNGEIPKSIGALSKLQIFRAGGNKNLKGELPWEIGNCRNLVILGLAETSISGALPSSIVMLKRLQTIAIYTSLLSGSIPEDIGNCSELQNLYLYQNSISGSIPRSLGKLRKLQNLLLWQNSLVGSIPDEIGFCRELLVIDFSENFITGRIPRSFGELPKLEGLQLSVNHISGTIPSELTNCTALTHLEIDNNDISGGIPLLIGNLKRLIIFFAWQNNLTGTIPETLGDCQELQAVDLSYNNLIGSVPKQIFGLKNLTKILLISNDLSGFILPDIGNCTNLYRFRLNGNRIGGTVPSEIGKLKVLNFVDLSSNHLAGEITPSISGCKNLEFLDLHSNWLTGSVPDNLPTTLRFVDISDNRLTGELSHAIGLLTELTKLNLENNQLSGRLPAEILSCSKLQLLNVGNNGFSGVIPKELGQIPSLEISLNLSCNQLSGEIPTQFSGLDKLGVLDLSRNQLWGNLSVLAQLQNLMSLNISFNDFSGELPDTPFFRNLPLSDITGNKGLSLSGRVVTPADKMSSTSRSRSVMKLVMAILASSSAVLILLGIYVLFRTRLASKVLREDDQWEMTFYQKFEFSINDIVRNLTSSNVIGTGSSGVVYRVTIPNAETLAVKKMWSSEESGAFTSEIQTLSSIRHKNIIRLLGWGSNRNLKLLFYDYLPNGSLSSLLHGAGKGAEWESRYDIVLGVGHALAYLHHDCVPPIMHGDVKAMNVLLGPGYQPYLADFGLASIVERNGGDDFSKRGQRPNLAGSYGYMAPEHASMQRITEKSDVYSFGVVLLEVLTGRHPLDPSLPGGAHLVQWIRDHLAKKRDPTDILDPKLRGRADPTSHEMVQTLAVSFLCISNRAHDRPAMKDVVAMLKEIRHIESARPELDISKGELTAIQSPPAARDVEFRGSSNCSFAFSDDSII 1093
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 4575899 4579276 + Bpe003967.1 Bpe11g00602 110747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g00602 1093 Pfam Leucine rich repeat N-terminal domain 37 76 IPR013210 -
Bpe11g00602 1093 Gene3D Ribonuclease Inhibitor 199 335 IPR032675 -
Bpe11g00602 1093 Gene3D Ribonuclease Inhibitor 532 609 IPR032675 -
Bpe11g00602 1093 Gene3D Ribonuclease Inhibitor 336 431 IPR032675 -
Bpe11g00602 1093 Pfam Leucine rich repeat 295 355 IPR001611 GO:0005515
Bpe11g00602 1093 Pfam Leucine rich repeat 104 160 IPR001611 GO:0005515
Bpe11g00602 1093 SUPERFAMILY Protein kinase-like (PK-like) 758 1043 IPR011009 -
Bpe11g00602 1093 SUPERFAMILY RNI-like 287 608 - -
Bpe11g00602 1093 Gene3D Phosphorylase Kinase; domain 1 741 842 - -
Bpe11g00602 1093 Gene3D Ribonuclease Inhibitor 610 695 IPR032675 -
Bpe11g00602 1093 Gene3D Ribonuclease Inhibitor 36 193 IPR032675 -
Bpe11g00602 1093 Gene3D Ribonuclease Inhibitor 432 531 IPR032675 -
Bpe11g00602 1093 SMART LRR_typ_2 294 318 IPR003591 -
Bpe11g00602 1093 SMART LRR_typ_2 342 366 IPR003591 -
Bpe11g00602 1093 SMART LRR_typ_2 486 510 IPR003591 -
Bpe11g00602 1093 SMART LRR_typ_2 556 580 IPR003591 -
Bpe11g00602 1093 SMART LRR_typ_2 629 652 IPR003591 -
Bpe11g00602 1093 SMART LRR_typ_2 149 173 IPR003591 -
Bpe11g00602 1093 Pfam Protein kinase domain 772 973 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe11g00602 1093 ProSiteProfiles Protein kinase domain profile. 769 1056 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe11g00602 1093 ProSitePatterns Protein kinases ATP-binding region signature. 775 798 IPR017441 GO:0005524
Bpe11g00602 1093 SUPERFAMILY L domain-like 574 675 - -
Bpe11g00602 1093 SUPERFAMILY L domain-like 38 308 - -
Bpe11g00602 1093 SMART serkin_6 769 1041 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe11g00602 1093 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 8 1059 - -
Bpe11g00602 1093 Gene3D Transferase(Phosphotransferase) domain 1 843 1061 - -
Bpe11g00602 1093 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 8 1059 - -
Bpe11g00602 1093 ProSitePatterns Serine/Threonine protein kinases active-site signature. 886 898 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe05g01131 Bpe-Chr5:23612290 Bpe11g00602 Bpe-Chr11:4575899 0 dispersed
Bpe11g00602 Bpe-Chr11:4575899 Bpe13g00534 Bpe-Chr13:12615834 0 dispersed
Bpe04g00022 Bpe-Chr4:210213 Bpe11g00602 Bpe-Chr11:4575899 0 transposed
Bpe11g00602 Bpe-Chr11:4575899 Bpe08g01082 Bpe-Chr8:12931670 1.14E-34 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63569 PF00069 Pkinase 3.50E-36 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g00602 - - mdm:114819440 1638.24