Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g00610 CAGATGAGTTCGGTTGATGATGAATCGACCAAAGCCCATGAGGAAGAGAGTCTGTTTCGGCCGGAGACTCGGCCCAGGAAGATCCCTAATGGCAATGCAGTTGAAAGTGGACCATTTGCGGATGATTCCCGAGCGATGGGTTCTAAACGACTTAATATTGTTGTATATAAGAGCGTAAAGACTGTTGTTTTCTCAAATAAACTAAACTTCCTTATCCCTTTCGGCCCTCTTGCAATCCTTGTTGACAAATTCACTGGTCATCACGGCTGGGTGTTCTTTTTTAGCTTGTTAGGTATAGTGCCTCTGGCTGAGCGTCTGGGTTATTCTACAGAGCAGCTGGCCTTTTATACGGGCGCTACTGTTGGGGGGCTCTTAAATGCTAGCTTCGGAAATGCAACAGAACTGATTATATCTATTTACGCTCTCAAGAGTGGAATGATTCGCGTTGTGCAGCTATCTTTACTAGGCTCGATTCTTTCCAATATGTTGTTAGTGCTTGGATGTGCATTCTTCTGTGGCGGACTCATTCATCGTAAAAAGGAACAGACTTTTAGCAAGTCGACTGCGGTTGTCAACTCGGGATTGCTTTTAATGGCAGTCATGGGCCTTCTCTTTCCTGCAGTTCTGTATTACACCCACAGTGAAGCTCATTTTGGGACCTCCGAGTTGGCTCTCTCTAGATTTACCAGCTGCATTATGCTCGTCGCCTATGCTGCCTATCTTTTCTTCCAGTTAAAGAGTCAAGAAAATCTGTATGCTTCTCCAGCTGAGGATGGGAGTCAGAATTGTGTGGATGGGGGAGACGATAATGAGGTCGCAGAGATCTCTAAATTGGAGTCAATAATCTGGCTTTTCATCATGACAGCTTGGATTTCTATTCTATCGGAGTATTTAGTTCATGCTATAGAGGGGGCATCAATATCATTCGGAATTCCAATCACATTTATTAGTGTTATTTTGCTGCCAATTGTGGGAAATGCAGCTGAGCATGCTAGTGCAATCTTGTTTGCTACGAAAGACAAGCTCGTAAGACTTCTAACCCAACATTTATTCTCTTCTGTTACTATGGACTGCAATAATTTCTGGGTATCTATGCAGGATATATCATTAGGAGTGGCAATTGGGTCATCAACGCAGATTTCTATGTTTGGAATAATATCACCCATGCACTACTGTATCCTGCAGGTTCCATTCTCAGTAGTGATTGGGTGGATGATGGGACAACCCATGGACTTAAACTTCAAGCTTTTCGAGACGGCTACTCTTTTTATAACCGTCATAGTGGTTGCCTTCTTGCTACAGGAAGGAACCTCTAATTATTTCAAAGGACTTATGCTTATTCTATGCTATTTGATAGTAGCCGCAAGCTTTTTTGTGCACGTCGATCCTCCGTCGTCTTCGGCAGGTCAGCGATTGTCTAAAGCTTCTGTTATAGGACCTCCTTGA 1446 43.5 QMSSVDDESTKAHEEESLFRPETRPRKIPNGNAVESGPFADDSRAMGSKRLNIVVYKSVKTVVFSNKLNFLIPFGPLAILVDKFTGHHGWVFFFSLLGIVPLAERLGYSTEQLAFYTGATVGGLLNASFGNATELIISIYALKSGMIRVVQLSLLGSILSNMLLVLGCAFFCGGLIHRKKEQTFSKSTAVVNSGLLLMAVMGLLFPAVLYYTHSEAHFGTSELALSRFTSCIMLVAYAAYLFFQLKSQENLYASPAEDGSQNCVDGGDDNEVAEISKLESIIWLFIMTAWISILSEYLVHAIEGASISFGIPITFISVILLPIVGNAAEHASAILFATKDKLVRLLTQHLFSSVTMDCNNFWVSMQDISLGVAIGSSTQISMFGIISPMHYCILQVPFSVVIGWMMGQPMDLNFKLFETATLFITVIVVAFLLQEGTSNYFKGLMLILCYLIVAASFFVHVDPPSSSAGQRLSKASVIGPP 481
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 4634247 4637097 + Bpe003975.2 Bpe11g00610 110755
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g00610 481 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 6 354 IPR004713 GO:0006812|GO:0008324|GO:0016021
Bpe11g00610 481 MobiDBLite consensus disorder prediction 1 41 - -
Bpe11g00610 481 Gene3D - 117 257 IPR044880 -
Bpe11g00610 481 Gene3D - 268 459 IPR044880 -
Bpe11g00610 481 PANTHER VACUOLAR CATION/PROTON EXCHANGER 2 6 354 - -
Bpe11g00610 481 PANTHER VACUOLAR CATION/PROTON EXCHANGER 2 366 466 - -
Bpe11g00610 481 MobiDBLite consensus disorder prediction 7 23 - -
Bpe11g00610 481 TIGRFAM cax: calcium/proton exchanger 71 342 IPR004798 GO:0006816|GO:0015369
Bpe11g00610 481 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 366 466 IPR004713 GO:0006812|GO:0008324|GO:0016021
Bpe11g00610 481 Pfam Sodium/calcium exchanger protein 281 455 IPR004837 GO:0016021|GO:0055085
Bpe11g00610 481 Pfam Sodium/calcium exchanger protein 90 245 IPR004837 GO:0016021|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe11g00610 Bpe-Chr11:4634247 Bpe14g00769 Bpe-Chr14:5875539 0 dispersed
Bpe11g00610 Bpe-Chr11:4634247 Bpe07g00693 Bpe-Chr7:13556618 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g00610 K07300 - mnt:21406517 617.846