Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g00633 ATGTATGTTGAGGAAATGAAGAGAGGGGAGGTAGAGAGTGGAGGAGAGAGAAATTCGAACGATGGAGATTGTAATTTTGTGAGCCAGAGCGTTGATGTTTCAGAGACGAAAAGAGTTTTGATTGGAGCTGGAGCTCGCGCTCTCTTCTACCCAACTCTGCTTTACAATGTTCTTAGGAATAAAATTCAGACCGAATTCCGGTGGTGGGATAGGGTTGACCAGTTTATACTGCTAGGTGCTGTTCCATTTCCCACTGACATACCCTGCTTGAAGGAGCTAGGTGTTGGGGGGGTCATCACACTGAATGAGCCGTATGAGACTTTGGTTCCAACAACCTTATATCAGGCTCATGGTATTGATCATCTGGTTATTCCTACCAGAGACTATTACTTTGCACCTTCATTAAGTAACATCATTCAGGCTGTGGATTTCATTCATGAAAACTCATTGTGTGGCCAAAGTACCTATGTTCACTGTAAAGCGGGAAGAGGGCGCAGCACTACTATAGTGATCTGCTACTTGGTGCAATATAAGCAGATGACACCAAATGACGCGTATAGTTACATCAGATCAATTAGGCCAAGGGTGCTTTTAGCATCTTCCCAGTGGCAGGCTGTCCATGAATTCTACTACCTTAATGTCAAGAAGACAGTTGTGTACAGTCATCTGACAAATCTCCTAATGAAAGCGCCAATGTCATTAGTGGCAAAAGATGTTGCATTTGATGATGGGTCCGTTGTTTTAGTTACAAAATCTGATCTCAATGGTTATGAAGAGAGTCTGGAGTCAAGGTCGGAGCAAAGTGAGATATGGGCAGATATTGGTGTTGTTTATCGGGTTCGAATTGTTGGTCAGGCTGCTATGGCCAGGATATCTTGTCTCTGGCTCCGATGCTGCACTCACCACCAGAAAAGCAAACTCATTGACAACAGTGGCTGCACAATCAGGGCTGCTCATCTCGAAGGCATAAGTATGGATATCCATGTTTACTGA 993 44.11 MYVEEMKRGEVESGGERNSNDGDCNFVSQSVDVSETKRVLIGAGARALFYPTLLYNVLRNKIQTEFRWWDRVDQFILLGAVPFPTDIPCLKELGVGGVITLNEPYETLVPTTLYQAHGIDHLVIPTRDYYFAPSLSNIIQAVDFIHENSLCGQSTYVHCKAGRGRSTTIVICYLVQYKQMTPNDAYSYIRSIRPRVLLASSQWQAVHEFYYLNVKKTVVYSHLTNLLMKAPMSLVAKDVAFDDGSVVLVTKSDLNGYEESLESRSEQSEIWADIGVVYRVRIVGQAAMARISCLWLRCCTHHQKSKLIDNSGCTIRAAHLEGISMDIHVY 330
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 4899074 4902303 - Bpe003992.1 Bpe11g00633 110778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g00633 330 CDD PTPMT1 68 210 IPR044596 GO:0004721
Bpe11g00633 330 PANTHER - 1 330 - -
Bpe11g00633 330 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 61 213 IPR029021 -
Bpe11g00633 330 SMART dsp_5 71 212 IPR020422 GO:0006470|GO:0008138
Bpe11g00633 330 Pfam Dual specificity phosphatase, catalytic domain 88 209 IPR000340 GO:0008138|GO:0016311
Bpe11g00633 330 Gene3D Protein tyrosine phosphatase superfamily 68 216 IPR029021 -
Bpe11g00633 330 MobiDBLite consensus disorder prediction 1 21 - -
Bpe11g00633 330 ProSitePatterns Tyrosine specific protein phosphatases active site. 157 167 IPR016130 GO:0016311|GO:0016791
Bpe11g00633 330 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE DSP8-RELATED 1 330 - -
Bpe11g00633 330 MobiDBLite consensus disorder prediction 1 17 - -
Bpe11g00633 330 ProSiteProfiles Dual specificity protein phosphatase domain profile. 68 215 IPR020422 GO:0006470|GO:0008138
Bpe11g00633 330 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 136 204 IPR000387 GO:0016311|GO:0016791
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g02223 Bpe-Chr2:23264477 Bpe11g00633 Bpe-Chr11:4899074 6.83E-102 dispersed
Bpe11g00633 Bpe-Chr11:4899074 Bpe15g01203 Bpe-Chr15:20746704 6.72E-06 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g00633 - - jre:108994353 473.396