Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe11g00644 | ATGGATTCTGGTTTTGTTTCTTCTATCAAGTTCAGCGAGCACCGCAGCCACGTTAAGCTTGTTTCCACGCCGGAAATAAGGCCTAAACTGGTGAGGATAACAGTGACCGATGGAGACGCGACTGACTCATCCAGTGACGATGAAGATGTAGTGTTTCCTCGTCAAAGGCTCAAGAAGTTTGTGACTGACATTACAATGGAGTCGCCGTCTTGCTGCGAAAGAAATGTCAAGTGGAGGCAGAGCAAGGGTACCAAAACTTGCCGGAAAAGCTGCATCGAAAAAACAAGATCTCCTCCAGCGACCCAAAAGCCGTTGAAAGTTACCGGTGGTAAGAAGTTCCGAGGCGTGAGGCAGAGGCCGTGGGGAAAATGGGCCGCTGAAATCAGAGATCCTCTGCGACGGGTGCGTCTCTGGTTAGGTACTTACGACACTGCAGAAGAAGCAGCCATGGTCTACGATAGCGCAGCTATTAAGCTTCGTGGGCCTGATGCTTTGACTAATTTTGCTATCCAACCTCCCAAGTGCTTGGCTGCCGCCGAACCTGCTTCTTCGACCTCCGGCTACCATTCCGGCGAAGAATCAAATAATAATAATCTTTGCTCACCGACCTCTGTTCTACGATGTGCTTCACCTTCAAATGAAGAGGCTGACTCGGAAAGCCCCGCCTCTTCTGCCATTCTTAAGGAAAACTATGACGGCGGCGAGGTCGGAAGTGAATCCTGCGTCTCGGGAAAAATCTCCGAGTTTGAGACCTTCATCCCGAGCGATATATTCGACTTTGACTTCCCCATACCAAGCCTGTTTGAGGAAGCGAGTCTACAGGAGGCCGTCGTTTTAGGAGATGATTACAGTAACTTTTTCAGTTCGAACGACGAATTGGGGACTGGATTTTCAACGTGGGGAGTAGACGATGAGTTCCAGGACATCGGCGACATATTCGGGTTGGATCCTCTAATGGCGCTCTGA | 966 | 50.0 | MDSGFVSSIKFSEHRSHVKLVSTPEIRPKLVRITVTDGDATDSSSDDEDVVFPRQRLKKFVTDITMESPSCCERNVKWRQSKGTKTCRKSCIEKTRSPPATQKPLKVTGGKKFRGVRQRPWGKWAAEIRDPLRRVRLWLGTYDTAEEAAMVYDSAAIKLRGPDALTNFAIQPPKCLAAAEPASSTSGYHSGEESNNNNLCSPTSVLRCASPSNEEADSESPASSAILKENYDGGEVGSESCVSGKISEFETFIPSDIFDFDFPIPSLFEEASLQEAVVLGDDYSNFFSSNDELGTGFSTWGVDDEFQDIGDIFGLDPLMAL | 321 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 4960790 | 4961755 | - | Bpe004001.1 | Bpe11g00644 | 110789 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe11g00644 | 321 | SMART | rav1_2 | 112 | 175 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe11g00644 | 321 | PIRSF | PTI6 | 210 | 306 | IPR017392 | GO:0003700 | |
Bpe11g00644 | 321 | PIRSF | PTI6 | 4 | 225 | IPR017392 | GO:0003700 | |
Bpe11g00644 | 321 | Pfam | AP2 domain | 112 | 161 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe11g00644 | 321 | Gene3D | AP2/ERF domain | 111 | 171 | IPR036955 | GO:0003700|GO:0006355 | |
Bpe11g00644 | 321 | ProSiteProfiles | AP2/ERF domain profile. | 112 | 169 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe11g00644 | 321 | CDD | AP2 | 111 | 171 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe11g00644 | 321 | PRINTS | Ethylene responsive element binding protein signature | 135 | 151 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe11g00644 | 321 | PRINTS | Ethylene responsive element binding protein signature | 113 | 124 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe11g00644 | 321 | PANTHER | SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR | 6 | 317 | - | - | |
Bpe11g00644 | 321 | SUPERFAMILY | DNA-binding domain | 112 | 170 | IPR016177 | GO:0003677 | |
Bpe11g00644 | 321 | PANTHER | ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR CRF5-RELATED | 6 | 317 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe03g00245 | Bpe-Chr3:3240249 | Bpe11g00644 | Bpe-Chr11:4960790 | 7.79E-70 | dispersed | |
Bpe07g01005 | Bpe-Chr7:15721497 | Bpe11g00644 | Bpe-Chr11:4960790 | 1.10E-48 | dispersed | |
Bpe11g00644 | Bpe-Chr11:4960790 | Bpe12g00369 | Bpe-Chr12:8949352 | 7.59E-61 | dispersed | |
Bpe11g00644 | Bpe-Chr11:4960790 | Bpe05g00678 | Bpe-Chr5:20437710 | 3.79E-92 | wgd | |
Bpe11g00644 | Bpe-Chr11:4960790 | Bpe07g00080 | Bpe-Chr7:593198 | 6.65E-94 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
22046 | PF00847 | AP2 | 5.40E-14 | CL0081 | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe11g00644 | - | - | jre:108997304 | 293.508 |