Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g00663 ATGGGGTTTCCAGTTGGCTACACGGAGCTTCTCCTCCCTAACCTCTTCCTCCATACTCTTTCCCTTCTGGGTTTTCTAAGGAAGTTTCTTTCCACTCTCTTTCGCTTCCTCGGCCTCCGCGACTTCCTCGAACCTGACATTTCCTTCTCCCAACCCGACCGCATCGGCCACGACTCCGATTCTATATCTTACGTTCTGATCCGAGAGTTTCTCCCCGTCGCCAAGTTTTCCGACCTTGTTCACCCGCCGGAGAGCTGTGCAGTTTGTCTTTACGAGTTCGAGGGCGACGATGAGATCCGGCGCCTCACAAATTGCCGTCACATATTCCATAAAGGCTGTCTCGATCGATGGATGTGTTACAACCAGAAGACGTGTCCGCTCTGTCGAACGCCATTCATTCCGCCGGATTTGCTCTGCGGTTCCGATGAACGGCCGTCTGAAATCGCCGAATCGTACGGTGATTCTTCGCAAATACCTAATGGTTTGTAG 489 52.35 MGFPVGYTELLLPNLFLHTLSLLGFLRKFLSTLFRFLGLRDFLEPDISFSQPDRIGHDSDSISYVLIREFLPVAKFSDLVHPPESCAVCLYEFEGDDEIRRLTNCRHIFHKGCLDRWMCYNQKTCPLCRTPFIPPDLLCGSDERPSEIAESYGDSSQIPNGL 162
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 5093079 5093567 - Bpe004020.1 Bpe11g00663 110808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g00663 162 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 70 133 IPR013083 -
Bpe11g00663 162 SUPERFAMILY RING/U-box 65 135 - -
Bpe11g00663 162 PANTHER RING ZINC FINGER PROTEIN-RELATED 1 138 - -
Bpe11g00663 162 ProSiteProfiles Zinc finger RING-type profile. 86 129 IPR001841 -
Bpe11g00663 162 SMART ring_2 86 128 IPR001841 -
Bpe11g00663 162 CDD RING-H2 86 129 - -
Bpe11g00663 162 Pfam Ring finger domain 85 129 IPR001841 -
Bpe11g00663 162 PANTHER BRH1 RING FINGER PROTEIN 1 138 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g00921 Bpe-Chr4:6147586 Bpe11g00663 Bpe-Chr11:5093079 1.40E-51 dispersed
Bpe05g00997 Bpe-Chr5:22739853 Bpe11g00663 Bpe-Chr11:5093079 5.44E-61 dispersed
Bpe06g00063 Bpe-Chr6:736040 Bpe11g00663 Bpe-Chr11:5093079 8.06E-18 dispersed
Bpe10g00098 Bpe-Chr10:1492725 Bpe11g00663 Bpe-Chr11:5093079 1.23E-16 dispersed
Bpe11g00663 Bpe-Chr11:5093079 Bpe15g00763 Bpe-Chr15:17984259 2.36E-15 dispersed
Bpe11g00663 Bpe-Chr11:5093079 Bpe05g00651 Bpe-Chr5:20298763 3.68E-59 wgd
Bpe11g00663 Bpe-Chr11:5093079 Bpe08g01498 Bpe-Chr8:15667748 5.84E-96 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g00663 K16281 - jre:109014495 231.876