Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe11g00663 | ATGGGGTTTCCAGTTGGCTACACGGAGCTTCTCCTCCCTAACCTCTTCCTCCATACTCTTTCCCTTCTGGGTTTTCTAAGGAAGTTTCTTTCCACTCTCTTTCGCTTCCTCGGCCTCCGCGACTTCCTCGAACCTGACATTTCCTTCTCCCAACCCGACCGCATCGGCCACGACTCCGATTCTATATCTTACGTTCTGATCCGAGAGTTTCTCCCCGTCGCCAAGTTTTCCGACCTTGTTCACCCGCCGGAGAGCTGTGCAGTTTGTCTTTACGAGTTCGAGGGCGACGATGAGATCCGGCGCCTCACAAATTGCCGTCACATATTCCATAAAGGCTGTCTCGATCGATGGATGTGTTACAACCAGAAGACGTGTCCGCTCTGTCGAACGCCATTCATTCCGCCGGATTTGCTCTGCGGTTCCGATGAACGGCCGTCTGAAATCGCCGAATCGTACGGTGATTCTTCGCAAATACCTAATGGTTTGTAG | 489 | 52.35 | MGFPVGYTELLLPNLFLHTLSLLGFLRKFLSTLFRFLGLRDFLEPDISFSQPDRIGHDSDSISYVLIREFLPVAKFSDLVHPPESCAVCLYEFEGDDEIRRLTNCRHIFHKGCLDRWMCYNQKTCPLCRTPFIPPDLLCGSDERPSEIAESYGDSSQIPNGL | 162 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 5093079 | 5093567 | - | Bpe004020.1 | Bpe11g00663 | 110808 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe11g00663 | 162 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 70 | 133 | IPR013083 | - | |
Bpe11g00663 | 162 | SUPERFAMILY | RING/U-box | 65 | 135 | - | - | |
Bpe11g00663 | 162 | PANTHER | RING ZINC FINGER PROTEIN-RELATED | 1 | 138 | - | - | |
Bpe11g00663 | 162 | ProSiteProfiles | Zinc finger RING-type profile. | 86 | 129 | IPR001841 | - | |
Bpe11g00663 | 162 | SMART | ring_2 | 86 | 128 | IPR001841 | - | |
Bpe11g00663 | 162 | CDD | RING-H2 | 86 | 129 | - | - | |
Bpe11g00663 | 162 | Pfam | Ring finger domain | 85 | 129 | IPR001841 | - | |
Bpe11g00663 | 162 | PANTHER | BRH1 RING FINGER PROTEIN | 1 | 138 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe04g00921 | Bpe-Chr4:6147586 | Bpe11g00663 | Bpe-Chr11:5093079 | 1.40E-51 | dispersed | |
Bpe05g00997 | Bpe-Chr5:22739853 | Bpe11g00663 | Bpe-Chr11:5093079 | 5.44E-61 | dispersed | |
Bpe06g00063 | Bpe-Chr6:736040 | Bpe11g00663 | Bpe-Chr11:5093079 | 8.06E-18 | dispersed | |
Bpe10g00098 | Bpe-Chr10:1492725 | Bpe11g00663 | Bpe-Chr11:5093079 | 1.23E-16 | dispersed | |
Bpe11g00663 | Bpe-Chr11:5093079 | Bpe15g00763 | Bpe-Chr15:17984259 | 2.36E-15 | dispersed | |
Bpe11g00663 | Bpe-Chr11:5093079 | Bpe05g00651 | Bpe-Chr5:20298763 | 3.68E-59 | wgd | |
Bpe11g00663 | Bpe-Chr11:5093079 | Bpe08g01498 | Bpe-Chr8:15667748 | 5.84E-96 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe11g00663 | K16281 | - | jre:109014495 | 231.876 |