Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g00665 ATGGCCAGAGAACTCTGCGAAGACAAATCAAGAAACATAGTTTCTTCGACAGCCTTTTGCTACTCGTCGGAGGTTTCTTCCGGCAACCCGAGTTTCCAAAACCATTTCGTAAGCCAGATCCAAGAATTCGAGCCAAATCCAGCTGAGATCTTCAGCTTGACGACGAACATGGAGATGATAGGATTTTCAAAGAATCTCCATCATCAAAGCGGAAGTAACTCAGTTTTTTGGAAAGAAGTTTCTACAAAGTCTAACATGGGGTCGTCTTCTGCAAAAACGATGAACGAATCATCCAGTTTCTACGACCATGATTTCAACAAGCAAGATTTTACCAGCACCAGCGAGAATCTAATGGCTGGCGTTGGACCAGTTACGGGAGCTTGGCAAGAGAATAGATTCTTTCTCGATGATTCTTCCTTGAGGAATAATGGGTTCTTCGGAAAAGCCGATACTATTCAACAGCAACAACAGATTTTGCGAGATGGGTTGGTCGGAAAAGTTGCAGATCTTCATCACCATGGCGAGTTTCAGCTTGGAAACTCCAAGTTTTTGATTCCAACGCAGCAGCTTTTGAATGAACTCTGCAGCCTTGGAGAGAGAATTAATGATGCCGCTAAGAAGAAGAGTCATAAAACCACGCAATGGGTAGAAGAAAATGCTACTACTTCTTTGAGGAAGCAGTCTCTTCACTCCCTTGATTTTATTGAATTGCAGAAGAGAAAAACGAGGCTATTTTCAATGATGGAAGAGCTCGAGCGTAGATACAGGCACTACTGCGACCAAATGAAAATGGTGGTGTCTTCATTCGAAGCGGTGGCCGGCGACGGAGCTGCGAATGTGTATTCCACTTTAGCCTGCACGGCTATGTCGAGGCATTTCAGGTGTTTGAAAGATGGGATAGTGGTTCAGATTCAGGCCGTGAAGAAGGCGATGGGAGAGAAAGATCAGCAGGCGGCAGCGCCGGGGGCTTCGAAGGGGGAAACGCCAAGGCTACGCATTCTTGATCAGACGCTAAGACAGCAAAGGGCTTTCCAGCAAATGAGCTTGATGGAGAGCCACCCATGGCGGCCACAGCGTGGCCTTCCTGAACGTTCCGTTTCTGTTCTCCGAGCTTGGCTGTTTGAACACTTTCTTCACCCGTACCCAAGCGATGTTGATAAACACATCTTAGCCCGCCAAACTGGTCTCTCAAGAAGCCAGGTTTCCAACTGGTTCATCAATGCAAGGGTGAGGCTGTGGAAGCCAATGGTGGAGGATATGTATTTGGAAGAACAAAAGGAGCATGAAAACACATTGAACTCCTCCGCCGGAGGCATCAACGTGGACAATAACAGAAGAACGAGGTCGGAAGATCAAAAACCGACGGCCGACCAACTACTCAAAATGAACTCCGAGTGCCTCTCATCCATCATTAACAACCCACCAAACTCAAAACCCGCCAAACCCATGCATAACCCCCACCACCAACAGCAAAATTTATGCTCATTCGGGACAATGGAGCTCGACTTCTCTTCCTACAATCATCACTCTGCCGGAGCTGCACAAAGTTTTAACGGCGGCAGCGGAGGAGGTGTCTCATTGACACTAGGGCTACAACATCATGGTGGTAATGGGCCGGTGAGCCTGGCATTCTCTCCCTCACCTCAAACTAATTCTCTCTTCTACCCTAGAGATTCCATTGAAGAATGTCAACCATCTATTCACTACTCCTTTTTAGATGCAGAAGCTCATAATTTGCCTTACAGAAATTTAATGGGGGCTCAGCTGCTCCACGATTTGGCTGGATAA 1788 46.98 MARELCEDKSRNIVSSTAFCYSSEVSSGNPSFQNHFVSQIQEFEPNPAEIFSLTTNMEMIGFSKNLHHQSGSNSVFWKEVSTKSNMGSSSAKTMNESSSFYDHDFNKQDFTSTSENLMAGVGPVTGAWQENRFFLDDSSLRNNGFFGKADTIQQQQQILRDGLVGKVADLHHHGEFQLGNSKFLIPTQQLLNELCSLGERINDAAKKKSHKTTQWVEENATTSLRKQSLHSLDFIELQKRKTRLFSMMEELERRYRHYCDQMKMVVSSFEAVAGDGAANVYSTLACTAMSRHFRCLKDGIVVQIQAVKKAMGEKDQQAAAPGASKGETPRLRILDQTLRQQRAFQQMSLMESHPWRPQRGLPERSVSVLRAWLFEHFLHPYPSDVDKHILARQTGLSRSQVSNWFINARVRLWKPMVEDMYLEEQKEHENTLNSSAGGINVDNNRRTRSEDQKPTADQLLKMNSECLSSIINNPPNSKPAKPMHNPHHQQQNLCSFGTMELDFSSYNHHSAGAAQSFNGGSGGGVSLTLGLQHHGGNGPVSLAFSPSPQTNSLFYPRDSIEECQPSIHYSFLDAEAHNLPYRNLMGAQLLHDLAG 595
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 5111635 5114449 + Bpe004022.1 Bpe11g00665 110810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g00665 595 Coils Coil 234 254 - -
Bpe11g00665 595 SUPERFAMILY Homeodomain-like 356 421 IPR009057 -
Bpe11g00665 595 CDD homeodomain 355 416 IPR001356 GO:0003677
Bpe11g00665 595 MobiDBLite consensus disorder prediction 428 455 - -
Bpe11g00665 595 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 1 549 - -
Bpe11g00665 595 Pfam Homeobox KN domain 372 411 IPR008422 GO:0003677|GO:0006355
Bpe11g00665 595 SMART HOX_1 355 419 IPR001356 GO:0003677
Bpe11g00665 595 SMART prehox3 172 302 IPR006563 -
Bpe11g00665 595 PANTHER HOMEOBOX PROTEIN BEL1 HOMOLOG 1 549 - -
Bpe11g00665 595 Pfam Associated with HOX 178 300 IPR006563 -
Bpe11g00665 595 Gene3D - 358 420 - -
Bpe11g00665 595 ProSiteProfiles 'Homeobox' domain profile. 352 415 IPR001356 GO:0003677
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00702 Bpe-Chr2:4780476 Bpe11g00665 Bpe-Chr11:5111635 2.54E-77 dispersed
Bpe03g01193 Bpe-Chr3:30826921 Bpe11g00665 Bpe-Chr11:5111635 3.28E-78 dispersed
Bpe04g00620 Bpe-Chr4:3964303 Bpe11g00665 Bpe-Chr11:5111635 1.16E-84 dispersed
Bpe04g01238 Bpe-Chr4:17992014 Bpe11g00665 Bpe-Chr11:5111635 2.22E-71 dispersed
Bpe04g01489 Bpe-Chr4:21461045 Bpe11g00665 Bpe-Chr11:5111635 1.06E-80 dispersed
Bpe06g00242 Bpe-Chr6:12829635 Bpe11g00665 Bpe-Chr11:5111635 3.40E-79 dispersed
Bpe11g00665 Bpe-Chr11:5111635 Bpe08g01496 Bpe-Chr8:15647714 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22048 PF07526 POX 3.90E-41 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g00665 - - pop:7472750 714.146