Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g00684 ATGTTGGCTGGTTGTTCTAGTTCAACATTACTGTCACCGAGGCATAGATTAAGGAGCGAAGCAGCAGCGCAGTTTCAAGCTTGCCATTTCCAGTTGCCTTCGATGAACACGCAGAGATTGGATTTACCATGTACCAGTTTTTCTCGCAAAGAGATCTCACGCTCGCAGCCGATTAGGCCAGCTGGGCTTTCGGTGGAGAAGACAATCGATTCAAAAGCTACCAGTTGCTCTCTCAAACAGATTAGGTTACCTCCTTTAGCTGCTACAAGCCTTCAGACGCCATTTTCAGAGGTTCGGAGAGAGATTGGCTGCGAGTTTTGGGAGAAAGGGAAGAACTTGAAAAGGTTAGCAGAAGATGAAGTCTGTGCAGACATAACAAAGAGGAAGAGAAGTGGAAGCTGCAAAAATGGAGAATGTATCCATCATTTGACATTTGAACAATTTGGCGGCGCTGACTATTTTTGGTTTCAGCCAGGTTTCAGTCACCCTCAAGAAGTTTGCTTTGTTCCGAGCGAAGTGATTTCATCACCCCCGGTAGAAAGTGGGGTGAACAAGATAACTGAATTCGGAGAGAAAGAAGGAGGCGCAGCCGTTCCGGCGAAAAACTTGTCAGATTCGAGTGGTTCGTCAGAAAATCAAAGCTTTGTCCTTCTGATAAACGAAAATGCCGCAGAAGAAGTTGGAAATGGGTCTAGAAATCCACATTTACTTCCTGGGTTTGGATCAGAAACTGGAACCGCAGAAAATCGAGGAGAGCGAGAAGGGTTTGAGCTCGTCAGCTTGCTGACGGCCTGCGTCGAAGCGATTCGATCGAAGAACATCGCATTGATCAACCATCTTATCGACAGATTAGGTGATCTTGCTTCTCCTCGAGGATCTTCGATGAGCCGTCTGGTGTCTTACTATACTGAAGCCTTAGCTCTGCGAGTGGCAAGACTATGGCCGCACATATTTCACATATCGACTCCCGGAGATTTCGATCGCGCTGAAGAAGATTCCGGCGCTGCATTAAGGCTTCTAAACCAGGTGAGCCCAATCCCAAAGTTCATCCATTTCACGTCAAATGAGGTACTCTTAAGAGCTTTTGACGGGAAAGACAGAGTTCACATCATAGATTTCGAGATAAAGCAAGGCCTTCAATGGCCGAGCTTGTTTCAAAGTTTAGCTTCGAGAACAAATCCACCTACCCATGTTAGGATCACCGGCGTAGGAGAATCGAAGCAGGAATTGAACGAGGCAGGTGACCGGCTTTCCGGATTTGCTGAGGCGTTGAATCTGCCATTCGAGTTCCACCCAGTCGTCGACCGGCTAGAAGACGTCCGGCTGTGGATGCTCCACGTGAAGGACCAAGAATGTGTAGCCGTGAATTGTGTTTTTCAGCTTCATAAACTGCTCCACGACCGCCATGGAAATGCAATAAGAAACTTTCTAGCCCTCATCAGAAGCACAAATCCTTCAACTGTCGTCATTGCAGAGCAAGAATCCGATCACAACAACCCAAATTTAGAGATGAGAGTTTTCAACACCTTGAAATACTACTCTGCCATTTTCGACTCCTTCGATTCGATATTTCCTCTGAACAACCCTGTCCGAATCAAAATAGAAGAGATGTTTGCAATGGAGGTTCGGAACATCATCGCTTGTGAGGGAATCGAGAGATTCGAGAGGCACGAGAGCTTCGCGAAATGGAGAAAAACTATGGAGTATAATGGGTTTAAGTGCACCGGGATTTCCGATCGAGAAATGATTCAAAGCCGAATTCTGCTGAAGATGTATGCTTGTGATAGTTATAATGTGAGCAAGCCAACTGAAGATGGAGCGTTGACTCTAAACTGGGAGGAGCAGCCTCTCTACACCGTGTCAGCATGGACGCCATTGCCATCAGAGATTGGAGGCAGCTCATCTTCTTTTTCTCGGACTTGA 1923 46.65 MLAGCSSSTLLSPRHRLRSEAAAQFQACHFQLPSMNTQRLDLPCTSFSRKEISRSQPIRPAGLSVEKTIDSKATSCSLKQIRLPPLAATSLQTPFSEVRREIGCEFWEKGKNLKRLAEDEVCADITKRKRSGSCKNGECIHHLTFEQFGGADYFWFQPGFSHPQEVCFVPSEVISSPPVESGVNKITEFGEKEGGAAVPAKNLSDSSGSSENQSFVLLINENAAEEVGNGSRNPHLLPGFGSETGTAENRGEREGFELVSLLTACVEAIRSKNIALINHLIDRLGDLASPRGSSMSRLVSYYTEALALRVARLWPHIFHISTPGDFDRAEEDSGAALRLLNQVSPIPKFIHFTSNEVLLRAFDGKDRVHIIDFEIKQGLQWPSLFQSLASRTNPPTHVRITGVGESKQELNEAGDRLSGFAEALNLPFEFHPVVDRLEDVRLWMLHVKDQECVAVNCVFQLHKLLHDRHGNAIRNFLALIRSTNPSTVVIAEQESDHNNPNLEMRVFNTLKYYSAIFDSFDSIFPLNNPVRIKIEEMFAMEVRNIIACEGIERFERHESFAKWRKTMEYNGFKCTGISDREMIQSRILLKMYACDSYNVSKPTEDGALTLNWEEQPLYTVSAWTPLPSEIGGSSSSFSRT 640
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 5266596 5268518 + Bpe004040.1 Bpe11g00684 110829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g00684 640 PANTHER SCARECROW-LIKE PROTEIN 28 6 628 IPR030027 -
Bpe11g00684 640 Pfam GRAS domain family 258 624 IPR005202 -
Bpe11g00684 640 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 6 628 IPR005202 -
Bpe11g00684 640 ProSiteProfiles GRAS family profile. 249 624 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe08g01474 Bpe-Chr8:15483011 Bpe11g00684 Bpe-Chr11:5266596 0 dispersed
Bpe11g00684 Bpe-Chr11:5266596 Bpe11g01481 Bpe-Chr11:11017199 2.76E-92 dispersed
Bpe11g00684 Bpe-Chr11:5266596 Bpe13g01052 Bpe-Chr13:16168816 1.49E-73 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22050 PF03514 GRAS 2.20E-126 CL0063 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g00684 - - tcc:18606459 812.757