Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g00686 ATGGAGTTCAGATTTGGGTCTGAGGAAAAACCAGAAACGTCTTGTTCTTCGTCGGCCGAGAGCAGTACTTCCCGTCTGGGGGGTCTGTCGGATGAAGAGGTTATACTGGCTTCTAACAGGCCGAAGAAACCAGCCGGTAGGAGGGTTTTTCGGGAAACGAGGCACCCGGTTTTTAGAGGGGTCCGCCGGAGAAACAAAGGTAAATGGGTCTGCGAGCTGCGCGAGCCGAAAACGAAAGCGAGAATTTGGCTCGGGACTTACCCGACGGCTGAGATGGCGGCTAGAGCGCACGACGTCGCCGCCCTTGCTCTGCGGGGAAAGGACGCTTGCCTGAATTTTGCAGACTCTAAGTGGCGATTGCCAAAGCCATTGCAGTCGAACGACGTAGGCGATATTAAAATTGCTGCTGCTCTCGCCGCCCGGAGTTTCGAGGTGGACGGAGGATGTGGCGGAGGTGAAGCGATGAAGGAGAAAATGAATGACGAAGAGCTAGAAGTTGATACATCATTGTTGATTGCTAGAATAGCTGAGACTCCTCTTCTCTCTCCGAGACCGTTCTGTGCAGAGAATATGAATTACGTCAGCTGGGATGACAACGAGAGTAGTTCCGACATGTCGTTATGGAATTTTTGCATTTAA 639 51.96 MEFRFGSEEKPETSCSSSAESSTSRLGGLSDEEVILASNRPKKPAGRRVFRETRHPVFRGVRRRNKGKWVCELREPKTKARIWLGTYPTAEMAARAHDVAALALRGKDACLNFADSKWRLPKPLQSNDVGDIKIAAALAARSFEVDGGCGGGEAMKEKMNDEELEVDTSLLIARIAETPLLSPRPFCAENMNYVSWDDNESSSDMSLWNFCI 212
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 5285809 5286447 + Bpe004042.1 Bpe11g00686 110831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g00686 212 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1F 160 212 - -
Bpe11g00686 212 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1F 7 145 - -
Bpe11g00686 212 Gene3D AP2/ERF domain 57 115 IPR036955 GO:0003700|GO:0006355
Bpe11g00686 212 ProSiteProfiles AP2/ERF domain profile. 57 114 IPR001471 GO:0003700|GO:0006355
Bpe11g00686 212 MobiDBLite consensus disorder prediction 1 47 - -
Bpe11g00686 212 CDD AP2 58 116 IPR001471 GO:0003700|GO:0006355
Bpe11g00686 212 Pfam AP2 domain 56 106 IPR001471 GO:0003700|GO:0006355
Bpe11g00686 212 SMART rav1_2 57 120 IPR001471 GO:0003700|GO:0006355
Bpe11g00686 212 MobiDBLite consensus disorder prediction 10 28 - -
Bpe11g00686 212 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 160 212 IPR045277 GO:0003700
Bpe11g00686 212 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 7 145 IPR045277 GO:0003700
Bpe11g00686 212 PRINTS Ethylene responsive element binding protein signature 80 96 IPR001471 GO:0003700|GO:0006355
Bpe11g00686 212 PRINTS Ethylene responsive element binding protein signature 58 69 IPR001471 GO:0003700|GO:0006355
Bpe11g00686 212 SUPERFAMILY DNA-binding domain 57 116 IPR016177 GO:0003677
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe05g00627 Bpe11g00686 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe11g00686 Bpe-Chr11:5285809 Bpe12g00412 Bpe-Chr12:9705559 1.25E-55 dispersed
Bpe11g00686 Bpe-Chr11:5285809 Bpe05g00627 Bpe-Chr5:20182305 4.14E-58 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22051 PF00847 AP2 8.30E-15 CL0081 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g00686 - - zju:107404829 207.994