Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g00699 ATGGACGGCAATTCTATTCCATTTCCTTTCCACACCAGAGACTTCCATCAGGAGCAGCATCAATTTCAAAACTCGGAGGATGAACAAACTGGGAGCAGCGGACTGAACAACCGAACCCAGATCAAGCGAGATCGAGACGGAAACATAGAAGACTCCGGCGCGGGAGAAAGCAGCAAGGACCTTGGCGCAGGCGCTGGAGAAGGTGAGATGTCTAGAAGGCCACGAGGCCGACCAGCGGGATCAAAAAACAAACCGAAACCACCTATTATCATCACACGCGACAGCGCCAACGCCCTCCGGACCCACGTCATCGAGGTCACCGATGGATGTGACGTGGTAGAGAGCGTTGCCACCTTTGCCCGTCGTCGCCAGCGGGGGATCTGCATTATGAGTGGCACCGGTTCCGTCATGAACGTGGCGATTAGGCAACCATCATCCCCAGGTGCAATCGTCAACTTACACGGCCGATTTGAAATCTTATCCCTAGCAGGATCTTTTCTTCCTCCTCCTGCACCACCGGCGGCTACGAGCTTGGCGATTTACCTAGCCGGAGGTCAAGGACAAGTGATTGGGGGGAGCGTTGTTGGAACCCTTATCGCCTCTGGTCCAGTTGTAATAATGGCCGCTTCGTTTAGCAACGCCGCTTACGAGAGGCTTCCCCTGGACGAAGATGAGCCACCGCTGCCGATGCCAGGCGCCGGTTTAGGGTCGCCTGGTGAAGTTAGCGATCAACAACAGCAGCAGCAACTTTTAGCAGATTCAAATGTTGCTAATTTATTCCATGGGTTGCCTCCAAATCTTCTCAACTCTATTCAGTTGCCGAATGAAGGGTATTGGGCAACCGGTCGACCACCTTACTGA 861 53.77 MDGNSIPFPFHTRDFHQEQHQFQNSEDEQTGSSGLNNRTQIKRDRDGNIEDSGAGESSKDLGAGAGEGEMSRRPRGRPAGSKNKPKPPIIITRDSANALRTHVIEVTDGCDVVESVATFARRRQRGICIMSGTGSVMNVAIRQPSSPGAIVNLHGRFEILSLAGSFLPPPAPPAATSLAIYLAGGQGQVIGGSVVGTLIASGPVVIMAASFSNAAYERLPLDEDEPPLPMPGAGLGSPGEVSDQQQQQQLLADSNVANLFHGLPPNLLNSIQLPNEGYWATGRPPY 286
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 5379086 5379946 - Bpe004055.1 Bpe11g00699 110844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g00699 286 PIRSF ESCAROLA 10 286 IPR014476 GO:0003680
Bpe11g00699 286 CDD DUF296 100 211 IPR005175 -
Bpe11g00699 286 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 4 286 IPR014476 GO:0003680
Bpe11g00699 286 MobiDBLite consensus disorder prediction 39 53 - -
Bpe11g00699 286 MobiDBLite consensus disorder prediction 221 248 - -
Bpe11g00699 286 ProSiteProfiles PPC domain profile profile. 96 232 IPR005175 -
Bpe11g00699 286 MobiDBLite consensus disorder prediction 1 90 - -
Bpe11g00699 286 SUPERFAMILY AF0104/ALDC/Ptd012-like 96 230 - -
Bpe11g00699 286 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 24-RELATED 4 286 - -
Bpe11g00699 286 Pfam Plants and Prokaryotes Conserved (PCC) domain 100 213 IPR005175 -
Bpe11g00699 286 MobiDBLite consensus disorder prediction 24 38 - -
Bpe11g00699 286 Gene3D - 99 226 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe05g00608 Bpe11g00699 CCT
Bpe07g00142 Bpe11g00699 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g01154 Bpe-Chr2:15141118 Bpe11g00699 Bpe-Chr11:5379086 1.88E-53 dispersed
Bpe05g00865 Bpe-Chr5:21849956 Bpe11g00699 Bpe-Chr11:5379086 1.31E-78 dispersed
Bpe08g00845 Bpe-Chr8:10747501 Bpe11g00699 Bpe-Chr11:5379086 4.54E-78 dispersed
Bpe11g00699 Bpe-Chr11:5379086 Bpe13g00896 Bpe-Chr13:15019899 1.01E-72 dispersed
Bpe14g00488 Bpe-Chr14:4358975 Bpe11g00699 Bpe-Chr11:5379086 1.59E-52 dispersed
Bpe15g01274 Bpe-Chr15:21146727 Bpe11g00699 Bpe-Chr11:5379086 2.18E-75 dispersed
Bpe02g00292 Bpe-Chr2:1926632 Bpe11g00699 Bpe-Chr11:5379086 3.44E-59 transposed
Bpe04g00846 Bpe-Chr4:5573272 Bpe11g00699 Bpe-Chr11:5379086 1.03E-82 transposed
Bpe14g00904 Bpe-Chr14:6741793 Bpe11g00699 Bpe-Chr11:5379086 9.13E-119 transposed
Bpe11g00699 Bpe-Chr11:5379086 Bpe05g00608 Bpe-Chr5:20055925 4.28E-116 wgd
Bpe11g00699 Bpe-Chr11:5379086 Bpe07g00142 Bpe-Chr7:1007613 2.08E-117 wgd
Bpe11g00699 Bpe-Chr11:5379086 Bpe08g01463 Bpe-Chr8:15334411 2.74E-160 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g00699 - - jre:109020760 398.282