Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g00702 ATGGAAGAGAGGGAAGGTGGTGTAAGAAGTGGGGTTACAGTGGTAGGATCAGACGCTCCGTCTGACTACCATCTTGCTCCGAGGACGGAGAACTCAGTCCCAACCGGTGGATCAACAGCGACGCCGGCGCAGCCAACATCTGCTTCAGCTCAGCCTGTGGCGGCACCACCGTCAGCGGGCTTGCCGTTGAAGAAAAAGAGAGGTAGGCCGAGGAAATACGGACCAGATGGAACAGTCACTATGGCGCTTTCACCGAAGCCGATATCGTCATCGGCCCCGCCTCCGGTTATTGACTTCTCCGCTGAGAAGCGGGGAAAGATACGGCCGGCGAACTCAGTGAGCAAAATCAAATACCAAATGGAGAATTTGGGTGAATGGGTTGCTTGCTCCGTTGGTGCTAATTTCACACCCCATATTATTACTGTCAACTCTGGGGAGGATGTCATGATGAAGATTATATCATTTTCCCAACAAGGGCCTCGAGCAATCTGCATTATTTCTGCAAATGGTGTGATCTCTAGCGTCACACTTCGCCAACCTGATTCGTCAGGAGGAACATTAACTTATGAGGGCCGATTTGAAATACTGTCTTTGTCCGGCTCGTTCATGCCGAGTGATAGTGGAGGAACAAGAAGTAGATCGGGTGGAATGAGCGTTTCATTAGCTAGTCCTGACGGTCGAGTCGTAGGAGGTGGAGTAGCTGGTTTACTTGTAGCTGCCAGTCCTGTCCAAGTCGTAGTAGGGAGTTTTATCTCCGGAAATCAACACGAACAAAAACCCAAGAAGCAAAAAAATGACACCACGTCAACTGCACAAGTAACTGCAGAGATTCCAGTTTCAAGCACGGATCTGAAATCTAATGTCTCAGCATCAAATCTGCACGATGAAAACTGGTCATCTCTGCCATCTGAGTCGAGAAATAAGCCAACTGATATTAACGTGTCGTTGCCGGGAGGGTAA 960 49.48 MEEREGGVRSGVTVVGSDAPSDYHLAPRTENSVPTGGSTATPAQPTSASAQPVAAPPSAGLPLKKKRGRPRKYGPDGTVTMALSPKPISSSAPPPVIDFSAEKRGKIRPANSVSKIKYQMENLGEWVACSVGANFTPHIITVNSGEDVMMKIISFSQQGPRAICIISANGVISSVTLRQPDSSGGTLTYEGRFEILSLSGSFMPSDSGGTRSRSGGMSVSLASPDGRVVGGGVAGLLVAASPVQVVVGSFISGNQHEQKPKKQKNDTTSTAQVTAEIPVSSTDLKSNVSASNLHDENWSSLPSESRNKPTDINVSLPGG 319
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 5414807 5417291 + Bpe004058.1 Bpe11g00702 110847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g00702 319 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 10 317 IPR039605 GO:0003680
Bpe11g00702 319 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 1 10 317 - -
Bpe11g00702 319 MobiDBLite consensus disorder prediction 265 312 - -
Bpe11g00702 319 Pfam Plants and Prokaryotes Conserved (PCC) domain 137 250 IPR005175 -
Bpe11g00702 319 SUPERFAMILY AF0104/ALDC/Ptd012-like 134 255 - -
Bpe11g00702 319 CDD DUF296 136 227 IPR005175 -
Bpe11g00702 319 MobiDBLite consensus disorder prediction 1 95 - -
Bpe11g00702 319 ProSiteProfiles PPC domain profile profile. 132 276 IPR005175 -
Bpe11g00702 319 Gene3D - 137 275 - -
Bpe11g00702 319 MobiDBLite consensus disorder prediction 31 53 - -
Bpe11g00702 319 MobiDBLite consensus disorder prediction 254 319 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe07g00145 Bpe11g00702 CCT
Bpe07g00145 Bpe11g00702 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe07g00968 Bpe-Chr7:15472111 Bpe11g00702 Bpe-Chr11:5414807 2.56E-93 dispersed
Bpe11g00702 Bpe-Chr11:5414807 Bpe12g00400 Bpe-Chr12:9426340 4.85E-98 dispersed
Bpe11g00702 Bpe-Chr11:5414807 Bpe07g00145 Bpe-Chr7:1020199 1.22E-151 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g00702 - - tcc:18606376 442.965