Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g00712 ATGACAACGCAGACGTGGCAGAAGCCCGTCGGAGGAGCTTCCAAGGTTCGAACACGTCTACTCTCTCTTTTCCATTTTCTACTTTCTTCTCCACTTCGCACAAACAGCCTACGCTCTCCTTTTCCTTTCTCACACTTCCCCCTTCATCTTCACTCTCCCCTAAACATGTACGACTCCGTCCCCCAACTTGTTTGCGTCACCGGTGGTAGCGGCTGTATTGGGTCCTGGCTCGTCCGCCTCCTCCTCCTCCGCGGCTACTCTGTTCACGCCACTGTTCAAAATCTCGGAGATGAGAACGAAACGAAACATCTGGAAGCCCTCGAAGGAGCTGACCAGCGTCTCCGTCTCTTCCAACTCGATCTACTCAACTATGACTCCATCCTTAAGCCTTTCTCTGGTTGTGCTGGCGTTTTTCACCTAGCCTCTCCTTGCATCGTTGATCGGGTCCAGCATCCTGAGAAGGAGCTCTTGGATCCGGCTATCAAAGGTACCATTAATGTCCTCACAGCAGCTAAAGAAGCAGGGGTCAAACGCGTGGTCGTCACTTCGTCTATCTCTGCCATTGTTCCAAGTCCTCACTGGCCTGCAGACGTTGTTAAGACAGAAGATTGTTGGACCGACATTGACTACTGTAAGGAGAAGGAATTATGGTACCCACTGTCAAAAACTCTGGCGGAAAAAGCTGCTTGGGAATTCGCCAAAGACAAGAATTTTGACGTTGTGGTTGTTAACCCTGGCACTGTGATGGGTCCTGTTATTCCTCCACGGCTTAACGCTAGCATGCTCATGCTTGTGCGTCTTCTCCAAGGGTGCACTGAGACCTACGATGGTTTCTTCATGGGATCGGTGCATTTTAAAGATGTAGCACTTGCACACATTTTGGTGTATGAAAACAAATCAGCCACAGGAAGACACTTGTGTGTCGAAGCAATATCTCATTATGGTGATTTTGCAGCGAAGGTTGCTGAGCTCTACCCTGAATATAAGGTCCCAAGTTTGCCTAGAGATACTCAAGCTGGATTGGTGAGGTCCAAGAATGGGGCTAAAAAGCTGATGGATCTGGGTTTGGAGTTCATAGGAATGGAGGAAATCATCAAGGATGCGGTTGAGAGCTTAAAGAGCAATGGATTCATTGCTTGA 1140 48.86 MTTQTWQKPVGGASKVRTRLLSLFHFLLSSPLRTNSLRSPFPFSHFPLHLHSPLNMYDSVPQLVCVTGGSGCIGSWLVRLLLLRGYSVHATVQNLGDENETKHLEALEGADQRLRLFQLDLLNYDSILKPFSGCAGVFHLASPCIVDRVQHPEKELLDPAIKGTINVLTAAKEAGVKRVVVTSSISAIVPSPHWPADVVKTEDCWTDIDYCKEKELWYPLSKTLAEKAAWEFAKDKNFDVVVVNPGTVMGPVIPPRLNASMLMLVRLLQGCTETYDGFFMGSVHFKDVALAHILVYENKSATGRHLCVEAISHYGDFAAKVAELYPEYKVPSLPRDTQAGLVRSKNGAKKLMDLGLEFIGMEEIIKDAVESLKSNGFIA 379
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 5492428 5494641 + Bpe004069.1 Bpe11g00712 110857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g00712 379 Pfam NAD dependent epimerase/dehydratase family 64 304 IPR001509 -
Bpe11g00712 379 Gene3D - 56 379 - -
Bpe11g00712 379 PANTHER CINNAMOYL-COA REDUCTASE-LIKE PROTEIN 62 370 - -
Bpe11g00712 379 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 62 370 - -
Bpe11g00712 379 CDD FR_SDR_e 64 356 - -
Bpe11g00712 379 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 61 372 IPR036291 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe08g01405 Bpe11g00712 CCT
Bpe05g00685 Bpe11g00712 CCT
Bpe05g00685 Bpe11g00712 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe10g00596 Bpe-Chr10:12867041 Bpe11g00712 Bpe-Chr11:5492428 4.84E-91 dispersed
Bpe11g00712 Bpe-Chr11:5492428 Bpe02g01697 Bpe-Chr2:19503593 1.43E-66 dispersed
Bpe11g00712 Bpe-Chr11:5492428 Bpe08g01405 Bpe-Chr8:14934280 2.95E-178 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g00712 - - jre:108989884 545.428