Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g00716 TTTGTCTCCCTCTCTTCACCTACAACTTCATTGACCTCCATGGCTGTGCCTCCCTGCTACTCCGACTACGCTCGAGCCTCGGACTGCCGCGACAGCCTGGCCGCATCCCATTTGAAGCTTCTCTCCATCTTCCTTATCTTCTTCACCAGCGTCCTCGGCATCTCTCTCCCTGTACTTCTTGCCCGTCTCTTCCACGGTAAACCTGTCTACCACAAAGCTATTCTGGTCATCAAGTGCTTCGCCGCCGGCGTGATTCTCTCCACGTCGCTGGTTCATGTTCTCCCAGACGCCTATCAAGCTCTCTCCGATTGCCAGGTGGCATCTCGCCATCCCTGGAAGGACTTCCCCTTCTCCGGCTTGGTAACCATGCTCGGGGCCCTACTCGCTCTTCTCGTCGACGTCACTGCCACCTCTCACGTCGACCACGCCCACTACAACCCTGTCGGCACGCAGGAGCAAATGCTGACTGTCAATTCCTTACGCTTCGATGCTCATGTGAAATCCAAGGAATCCACAGTTGAATCAGCAGAGTCGGGAGCGAGTATGGAGGAGCGAGGGGATGAAGAACTGGCGAGGCTGAAGCAGAAACTGGTATCGCAGGTATTAGAGATAGGCATAATCTTTCACTCGGTCATAATAGGTGTAACGATGGGGATGTCTCAGAATCGGTGCACTATCAGACCTCTGGTCGCTGCTCTGTCTTTTCACCAGATCTTCGAGGGCATGGGTCTCGGCGGCTGCATTGCTCAGGCAGGGTTTAGCGTCGGAACAACAGCGTACATGAGCTTCCTGTTTTCAGTGACGACTCCGATGGGAATAGTGTTGGGGATGTTACTGTTCTCGGTGACAGGTTACGACGACAGCAGCCCAAATGCTTTGATAATGGAAGGATTGTTAGGCTCAGTTTCATCTGGCATTCTCATATACATGGCACTTGTCGACCTCATAGCTGTTGATTTCTTCCACAATAAGATGATGACCTCCAATCACTTGCTGAAAAAGGTCTCCTTCGTTGCTCTAGCTCTCGGCTCTGCGCTCATGTCAATTCTCGCTTTATGGGCTTGA 1065 52.49 FVSLSSPTTSLTSMAVPPCYSDYARASDCRDSLAASHLKLLSIFLIFFTSVLGISLPVLLARLFHGKPVYHKAILVIKCFAAGVILSTSLVHVLPDAYQALSDCQVASRHPWKDFPFSGLVTMLGALLALLVDVTATSHVDHAHYNPVGTQEQMLTVNSLRFDAHVKSKESTVESAESGASMEERGDEELARLKQKLVSQVLEIGIIFHSVIIGVTMGMSQNRCTIRPLVAALSFHQIFEGMGLGGCIAQAGFSVGTTAYMSFLFSVTTPMGIVLGMLLFSVTGYDDSSPNALIMEGLLGSVSSGILIYMALVDLIAVDFFHNKMMTSNHLLKKVSFVALALGSALMSILALWA 354
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 5517126 5518537 + Bpe004073.1 Bpe11g00716 110861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g00716 354 Pfam ZIP Zinc transporter 37 351 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Bpe11g00716 354 PANTHER ZINC TRANSPORTER 6, CHLOROPLASTIC 19 354 - -
Bpe11g00716 354 PANTHER ZINC/IRON TRANSPORTER 19 354 - -
Bpe11g00716 354 TIGRFAM zip: ZIP zinc/iron transport family 26 354 IPR004698 GO:0005385|GO:0016021|GO:0071577
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe11g00716 Bpe-Chr11:5517126 Bpe11g01054 Bpe-Chr11:7904607 1.30E-78 dispersed
Bpe11g00716 Bpe-Chr11:5517126 Bpe08g00961 Bpe-Chr8:12013741 1.36E-82 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g00716 K14709 - ini:109163302 474.552