Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe11g00729 | AGCCGCAAACCGAGCTCACCATCCGAATCAAGACAACGCAAGTTCTTCTTCAACCCCCAGAAAGCTTTCTCCTCTTCTTTCTCTTTCCTCAAAACCATCTTCTCCTCTTCCCAGACCTGCAAATCAATAGACCAAACTCCATCCTCCCACCAATCCACAGTCTCCTCACGACTGCCCGAGCTTGATTCCTCCGATATTCTGATTAAAAAATCAACTGGGTCTTGCCTGGATTCCGATATCTCGGCCAATAATCCATTCTCCCCCCTCAGAAACGATATTTTCCCCTGCACAGCTTGCGGCGAGATTTTTTCGAAACCTTACCTGCTCGAACAGCATCAAGCTATCAAACATGCTGTTTCGGAGCTTACAGATGGAGACACGGGCAAAAACATAGTCAAAATCATATTCAAAACGGGTTGGCGCAGTAATGAAAAGACCCCTAAAATCACTCGGATCCTTAAAGTTCACAACAGCCAAAAGATACTGTCGAGATTCGAAGAGTACAGGGAGACAGTAAAGATCAAGGCAGCACGACACGGCAGCGTTAGGAGGAGAGACGAGAGGTGTATTGCCGATGGAAATGAGCTTCTGAGGTTTCACTGTTCGACTTTCGCGTGCGACTTAGGAGTCAACGGTAGCTCCAGCCTCTGCGGCCAGGAATTTTGCAATGTTTGCGAGATAATAAAATCAGGGTTTTCGCCCAAATTGGACGGAATTTCGACGATGTCAAACAGTTGGAGGGCACACGTGTCGTTGCCGGAGGAGGTGGAGGAGGAGTTCAAGTACCTGAACGTGAAGAGGGCGGTGATGGTGTGTCGGGTGGTAGCGGGTCGGGTGGGCTGTGAAGCAGAGGAAGCGGAGAAGGAGGATGGAGGGTTTGACTCAGTCGTTGGAAGGAAAGGAAGCGGGACCCACATAAGGTTTGACGAAGAGGAGCTGCTGGTGTTTAATCCAAGGGGTGTGCTGCCTTGCTTTGTGATCGTCTACAACGTC | 993 | 49.55 | SRKPSSPSESRQRKFFFNPQKAFSSSFSFLKTIFSSSQTCKSIDQTPSSHQSTVSSRLPELDSSDILIKKSTGSCLDSDISANNPFSPLRNDIFPCTACGEIFSKPYLLEQHQAIKHAVSELTDGDTGKNIVKIIFKTGWRSNEKTPKITRILKVHNSQKILSRFEEYRETVKIKAARHGSVRRRDERCIADGNELLRFHCSTFACDLGVNGSSSLCGQEFCNVCEIIKSGFSPKLDGISTMSNSWRAHVSLPEEVEEEFKYLNVKRAVMVCRVVAGRVGCEAEEAEKEDGGFDSVVGRKGSGTHIRFDEEELLVFNPRGVLPCFVIVYNV | 331 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 5568109 | 5569101 | - | Bpe024777 | Bpe11g00729 | 110874 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe11g00729 | 331 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 96 | 117 | IPR013087 | - | |
Bpe11g00729 | 331 | PANTHER | C2H2-LIKE ZINC FINGER PROTEIN | 9 | 330 | - | - | |
Bpe11g00729 | 331 | PANTHER | NUCLEIC ACID BINDING PROTEIN | 9 | 330 | - | - | |
Bpe11g00729 | 331 | Gene3D | - | 118 | 330 | - | - | |
Bpe11g00729 | 331 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 94 | 122 | IPR013087 | - | |
Bpe11g00729 | 331 | SUPERFAMILY | ADP-ribosylation | 119 | 330 | - | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bpe08g01394 | Bpe11g00729 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe05g00138 | Bpe-Chr5:3254886 | Bpe11g00729 | Bpe-Chr11:5568109 | 4.99E-67 | dispersed | |
Bpe09g00200 | Bpe-Chr9:1397029 | Bpe11g00729 | Bpe-Chr11:5568109 | 3.53E-60 | dispersed | |
Bpe11g00520 | Bpe-Chr11:4051556 | Bpe11g00729 | Bpe-Chr11:5568109 | 2.64E-53 | dispersed | |
Bpe11g00729 | Bpe-Chr11:5568109 | Bpe08g01435 | Bpe-Chr8:15105022 | 7.92E-31 | wgd | |
Bpe11g00729 | Bpe-Chr11:5568109 | Bpe08g01394 | Bpe-Chr8:14887511 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
22055 | None | None | None | None | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe11g00729 | - | - | qlo:115989317 | 459.144 |