Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g00729 AGCCGCAAACCGAGCTCACCATCCGAATCAAGACAACGCAAGTTCTTCTTCAACCCCCAGAAAGCTTTCTCCTCTTCTTTCTCTTTCCTCAAAACCATCTTCTCCTCTTCCCAGACCTGCAAATCAATAGACCAAACTCCATCCTCCCACCAATCCACAGTCTCCTCACGACTGCCCGAGCTTGATTCCTCCGATATTCTGATTAAAAAATCAACTGGGTCTTGCCTGGATTCCGATATCTCGGCCAATAATCCATTCTCCCCCCTCAGAAACGATATTTTCCCCTGCACAGCTTGCGGCGAGATTTTTTCGAAACCTTACCTGCTCGAACAGCATCAAGCTATCAAACATGCTGTTTCGGAGCTTACAGATGGAGACACGGGCAAAAACATAGTCAAAATCATATTCAAAACGGGTTGGCGCAGTAATGAAAAGACCCCTAAAATCACTCGGATCCTTAAAGTTCACAACAGCCAAAAGATACTGTCGAGATTCGAAGAGTACAGGGAGACAGTAAAGATCAAGGCAGCACGACACGGCAGCGTTAGGAGGAGAGACGAGAGGTGTATTGCCGATGGAAATGAGCTTCTGAGGTTTCACTGTTCGACTTTCGCGTGCGACTTAGGAGTCAACGGTAGCTCCAGCCTCTGCGGCCAGGAATTTTGCAATGTTTGCGAGATAATAAAATCAGGGTTTTCGCCCAAATTGGACGGAATTTCGACGATGTCAAACAGTTGGAGGGCACACGTGTCGTTGCCGGAGGAGGTGGAGGAGGAGTTCAAGTACCTGAACGTGAAGAGGGCGGTGATGGTGTGTCGGGTGGTAGCGGGTCGGGTGGGCTGTGAAGCAGAGGAAGCGGAGAAGGAGGATGGAGGGTTTGACTCAGTCGTTGGAAGGAAAGGAAGCGGGACCCACATAAGGTTTGACGAAGAGGAGCTGCTGGTGTTTAATCCAAGGGGTGTGCTGCCTTGCTTTGTGATCGTCTACAACGTC 993 49.55 SRKPSSPSESRQRKFFFNPQKAFSSSFSFLKTIFSSSQTCKSIDQTPSSHQSTVSSRLPELDSSDILIKKSTGSCLDSDISANNPFSPLRNDIFPCTACGEIFSKPYLLEQHQAIKHAVSELTDGDTGKNIVKIIFKTGWRSNEKTPKITRILKVHNSQKILSRFEEYRETVKIKAARHGSVRRRDERCIADGNELLRFHCSTFACDLGVNGSSSLCGQEFCNVCEIIKSGFSPKLDGISTMSNSWRAHVSLPEEVEEEFKYLNVKRAVMVCRVVAGRVGCEAEEAEKEDGGFDSVVGRKGSGTHIRFDEEELLVFNPRGVLPCFVIVYNV 331
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 5568109 5569101 - Bpe024777 Bpe11g00729 110874
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g00729 331 ProSitePatterns Zinc finger C2H2 type domain signature. 96 117 IPR013087 -
Bpe11g00729 331 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 9 330 - -
Bpe11g00729 331 PANTHER NUCLEIC ACID BINDING PROTEIN 9 330 - -
Bpe11g00729 331 Gene3D - 118 330 - -
Bpe11g00729 331 ProSiteProfiles Zinc finger C2H2 type domain profile. 94 122 IPR013087 -
Bpe11g00729 331 SUPERFAMILY ADP-ribosylation 119 330 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe08g01394 Bpe11g00729 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe05g00138 Bpe-Chr5:3254886 Bpe11g00729 Bpe-Chr11:5568109 4.99E-67 dispersed
Bpe09g00200 Bpe-Chr9:1397029 Bpe11g00729 Bpe-Chr11:5568109 3.53E-60 dispersed
Bpe11g00520 Bpe-Chr11:4051556 Bpe11g00729 Bpe-Chr11:5568109 2.64E-53 dispersed
Bpe11g00729 Bpe-Chr11:5568109 Bpe08g01435 Bpe-Chr8:15105022 7.92E-31 wgd
Bpe11g00729 Bpe-Chr11:5568109 Bpe08g01394 Bpe-Chr8:14887511 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22055 None None None None Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g00729 - - qlo:115989317 459.144