Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g00748 ATGGCGGACATTTACCGCTCGGTGATGAGTGAGAGCAACGTCGGTCGTAGTGCCAGTCGAAGGAGATCGATGGACCACGAGAAGGTTGAATTGGAGCCTGAAATGGCTCCCCCGGAAATGGATGACCATCGAAAGCGTCAGAAACTAGAGGCTGTAGCAGATTCGTTTTCAATAGACTGTAGATACGCGGTGGATAGTTCTTCTTTAGACGAAGACAAGGAGTTAGTAAAGCTTGAATGTAGGAAACCAGAGATGGTGGAAAGCTCTCCGTCACCTCCGTCTTTGGACCTTTCCATATCGCTTCTCTGTCGACCTCCCGCAGCTCGAGTAGCTCCAGAAGTTCCGGGAGAGTATCCGAGGTTCGGAGTGGTTTCGATTCGGGGAAGGCGAAGAGAAATGGAAGATGCGGTCGCCGTTCAACCATCGTTTTGCCGCATAGGCCATGTTACCAACCCTCACCTGCATTACTTCGCTGTTTACGACGGTCACGGTTGCTCTCATGTAGTATTAAGTATTTCTTTCTCGTCCGCTTTCACTCGAGGGTTTTCTTTCTCGTATCGCTTTTCTGAGGCCATTCTTCTGGTTCAGGTGGCGATCAAGTGCAGGGAGCGGTTGCACGAGCTGGTCAAGGAAGAGTTGGAAAGAGAGGTTGGATCATCTTCGTCGAATGATTGGAAGAGCGCCATGGAAAGAAGCTTTCGGCGCATGGACGAGGAAGTCTGTTGGTGTAGTGAAAGAATTGCAGCTTCAAACTGCAGGTGCGAGCTTCATCCCCCACAGTGCAATACGGTTGGAACTACAGCCGTGGCTGCTGTTTTAACCCCTGAGAAGATCATCGTCTCTAACTGCGGTGACTCGAGGGCTGTTCTCTGTCGTAGCGGCAAACCAGTCCCTCTCTCTTCTGATCACAAAGTTGCTTCTTTTTTCTTGTCCTATCCGTCTAGTTTCTGTATTTTTGCACCCACCGGAAATTATACAATATTTACTTCTTGCAAACAGCCGGATCGACCAGATGAACTGAATCGGATCGAAGCGGCCGGCGGGCAAGTGATTTACTGGGGAGGCCCAAGAGTTCTCGGAGTTCTAGCCACATCAAGAGCCATTGGTGATAACTATCTGAAGCCCTACGTAACCTGCGACCCGGAAGTGACGATCACTGATCGGTCGCCGGAGGATGATTGTCTGCTGATAGGAAGCGATGGACTTTGGGACGTTGTGTCCAACGAGACGGCGTGCGAGGTGGCGCGCATGTGCCTCCAAGGCAAGTTTCAAAGGTTGCGGCCGCACTGTGCCTCAGTGTGCAGCGCAGTCGCCAGCCCAGAAATTCCTGACGAGGCATGCAGCGAGGCGGCAACAATGCTGAGCAAGTTGGCACTAGGCCGGAAAAGTGTTGACAATGTGAGCTTGGTAATCGTAGACCTCAGGAGTGACAGATCGAATGCAGTCAACTAA 1452 51.38 MADIYRSVMSESNVGRSASRRRSMDHEKVELEPEMAPPEMDDHRKRQKLEAVADSFSIDCRYAVDSSSLDEDKELVKLECRKPEMVESSPSPPSLDLSISLLCRPPAARVAPEVPGEYPRFGVVSIRGRRREMEDAVAVQPSFCRIGHVTNPHLHYFAVYDGHGCSHVVLSISFSSAFTRGFSFSYRFSEAILLVQVAIKCRERLHELVKEELEREVGSSSSNDWKSAMERSFRRMDEEVCWCSERIAASNCRCELHPPQCNTVGTTAVAAVLTPEKIIVSNCGDSRAVLCRSGKPVPLSSDHKVASFFLSYPSSFCIFAPTGNYTIFTSCKQPDRPDELNRIEAAGGQVIYWGGPRVLGVLATSRAIGDNYLKPYVTCDPEVTITDRSPEDDCLLIGSDGLWDVVSNETACEVARMCLQGKFQRLRPHCASVCSAVASPEIPDEACSEAATMLSKLALGRKSVDNVSLVIVDLRSDRSNAVN 483
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 5673131 5674642 - Bpe004098.4 Bpe11g00748 110893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g00748 483 ProSitePatterns PPM-type phosphatase domain signature. 156 164 IPR000222 GO:0043169
Bpe11g00748 483 SMART PP2C_4 110 472 IPR001932 -
Bpe11g00748 483 MobiDBLite consensus disorder prediction 18 45 - -
Bpe11g00748 483 PANTHER PROTEIN PHOSPHATASE 2C 37 196 304 - -
Bpe11g00748 483 PANTHER PROTEIN PHOSPHATASE 2C 37 116 170 - -
Bpe11g00748 483 SUPERFAMILY PP2C-like 315 475 IPR036457 -
Bpe11g00748 483 SUPERFAMILY PP2C-like 119 306 IPR036457 -
Bpe11g00748 483 MobiDBLite consensus disorder prediction 1 45 - -
Bpe11g00748 483 PANTHER PROTEIN PHOSPHATASE 2C 37 329 478 - -
Bpe11g00748 483 PANTHER ALPHABET, ISOFORM E-RELATED 196 304 - -
Bpe11g00748 483 PANTHER ALPHABET, ISOFORM E-RELATED 329 478 - -
Bpe11g00748 483 PANTHER ALPHABET, ISOFORM E-RELATED 116 170 - -
Bpe11g00748 483 CDD PP2Cc 120 474 IPR001932 -
Bpe11g00748 483 ProSiteProfiles PPM-type phosphatase domain profile. 120 474 IPR001932 -
Bpe11g00748 483 Pfam Protein phosphatase 2C 195 306 IPR001932 -
Bpe11g00748 483 Pfam Protein phosphatase 2C 328 466 IPR001932 -
Bpe11g00748 483 Gene3D - 114 481 IPR036457 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe01g00119 Bpe11g00748 CCT
Bpe01g00119 Bpe11g00748 ECH
Bpe08g00091 Bpe11g00748 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g01718 Bpe-Chr4:23010274 Bpe11g00748 Bpe-Chr11:5673131 2.63E-117 dispersed
Bpe11g00748 Bpe-Chr11:5673131 Bpe15g01272 Bpe-Chr15:21139929 5.50E-122 dispersed
Bpe01g00119 Bpe-Chr1:688960 Bpe11g00748 Bpe-Chr11:5673131 1.81E-122 wgd
Bpe11g00748 Bpe-Chr11:5673131 Bpe08g00091 Bpe-Chr8:499563 1.12E-119 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g00748 K14497 - jre:109017805 444.121