Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g00767 GATCTTTGCAAGAACCCCGTCGATGGGTTTTCCGCCGGTCTCGTGGACGAAACTAATATCTTTGATTGGAGCGTCACGATTATTGGACCACCTGACACACTCTATGAGGGTGGTTTTTTCAATGCCATCATGAGTTTTCCATCCAATTATCCTAACAGTCCGCCTTCAGTGAAGTTTACTTCAGAAGTTTGGCATCCTAATGTTTATCCTGATGGCCGTGTTTGCATTTCAATTCTTCATCCACCTGGCGATGATCCAAATGGCTATGAGCTGGCAAGTGAGCGTTGGACCCCTGTGCATACAGTTGAAAGTATAGTTTTGAGTATAATATCCATGCTCTCTAGCCCCAATGATGAATCCCCTGCCAATGTGGAAGCTGCAAAAGAATGGAGAGACCGGAGAGATGAATTCAAGAAAAAAGTAAGCCGTTGTGTGAGGAAGTCTCAAGAGCTGTTGTGA 459 44.88 DLCKNPVDGFSAGLVDETNIFDWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPSVKFTSEVWHPNVYPDGRVCISILHPPGDDPNGYELASERWTPVHTVESIVLSIISMLSSPNDESPANVEAAKEWRDRRDEFKKKVSRCVRKSQELL 152
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 5774047 5776247 + Bpe004116.1 Bpe11g00767 110912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g00767 152 ProSitePatterns Ubiquitin-conjugating (UBC) active site signature. 64 79 IPR023313 -
Bpe11g00767 152 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 1 150 IPR000608 -
Bpe11g00767 152 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 1 152 - -
Bpe11g00767 152 Pfam Ubiquitin-conjugating enzyme 2 144 IPR000608 -
Bpe11g00767 152 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 13 1 152 - -
Bpe11g00767 152 SUPERFAMILY UBC-like 2 148 IPR016135 -
Bpe11g00767 152 SMART ubc_7 1 150 - -
Bpe11g00767 152 Gene3D Ubiquitin Conjugating Enzyme 1 151 IPR016135 -
Bpe11g00767 152 CDD UBCc 1 145 IPR000608 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe08g01364 Bpe11g00767 CCT
Bpe08g01364 Bpe11g00767 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe11g00767 Bpe-Chr11:5774047 Bpe02g01944 Bpe-Chr2:21395909 3.71E-32 dispersed
Bpe11g00767 Bpe-Chr11:5774047 Bpe08g01364 Bpe-Chr8:14718779 5.76E-81 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g00767 K10575 - gmx:100782328 298.901