Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g00777 ATGTCGTTCTGTAACAAGGGCTTTTGGATGGATAAAGGCTCTGAATTTGTTACTGATCCAAATTCAACTTGTGATGACCCTTCACGAATACAAAGAAAGCGATCTCAACGGTGGTTTGTAGATGCTGCTGACTCGGACATCTTTCCCAACAAGAAGCGAGTGGTACAAGCTCCAAATAGTAAATTGAGTTATGAGTTCCCAATTGCTAATATTTCTCCCTGGGAGAATGCATCCAATTTTCAATCAGTCCAAAATCACTTTATTGATCGAATGTTTGAATCAGAAACTGCACGGCCAATTCAATTTCCCAGCAGAGACTTATCTTCTGTGCGAGCTGATAGTTTGAATTTGAGCGGCCAATTTGAAGGAGATGCATCTATTGGCTTGTCCATATCACATGCTATGGAAGATCGTGGAGCATCTTCAATTTATGGCGAATTGAGAAAAGTTAAAGATGATTGTGTGGAAAATGACCTTGATATTTACAATCTGAGGGGGCATAATTCTTTCAAGGAAAATAACCATGATCTGACAGTAGAACAGCTCCATTCCAGAAAAATAAGCAGTGGTTTCTATTCAAGTAGGCAGGCCTATAAAGAGGATGGTGGTGTCACATTGATTGACCATTCATGCAACAGAGGTGATGCTCATGGGAAGTTACTAGGCCTTGGATTTGGAAAGGAAGATAACATTGCAATGCCAATTGGTGATACCTATTATAAAGCAGATCCCAACATAATATCTTTTGGTGGGTTTCCTGAAGAGCATGATATTGTGCCATTGGGTCGGCCTATTGGCAGCTGTAATGTCTCATACAATCAATCAGTTCAAGTATCCGGAACACCCTACGAGGAGGCATTGGATGGATCAAATGCCAGTGCAATTTCTTGCTCTAGTCAAACTTCTAAATTAAAACCTGAAACTATTGTAAAGAATAAATCAGAGTTTAAAACATCGAGGAAAGAAGCTCCCAATAGTTTCCCTTCAAATGTCAGAACTTTGATATCCACCGGTATGCTTGATGGTGTTCCAGTCAAGTACATCTCCTTGGCACGGGAGGAACTTCGTGGGATTATCAAAGGCTCTGGCTATCTTTGTGGTTGTCAATCATGTAACTTTTCTAAGGTGCTTAATGCTTACGAGTTTGAGAGGCATGCCGGCAGCAAAACTAAACATCCGAATAATCATATTTACTTCGAGAATGGGAAGACAATTTACCAGATAGTACAAGAATTGAGGAGCACACCTCAAAGCTGCTTGTTTGATACAATTCAAACTGTATTTGGTGCTCCAATCAATCAAAAATCTTTCCGCATATGGAAAGAATCATTTCAAGCAGCTACAAGAGAGCTTCAGCGAATTTATGGAAAGGAAGAGCTGAACCTATAG 1389 40.1 MSFCNKGFWMDKGSEFVTDPNSTCDDPSRIQRKRSQRWFVDAADSDIFPNKKRVVQAPNSKLSYEFPIANISPWENASNFQSVQNHFIDRMFESETARPIQFPSRDLSSVRADSLNLSGQFEGDASIGLSISHAMEDRGASSIYGELRKVKDDCVENDLDIYNLRGHNSFKENNHDLTVEQLHSRKISSGFYSSRQAYKEDGGVTLIDHSCNRGDAHGKLLGLGFGKEDNIAMPIGDTYYKADPNIISFGGFPEEHDIVPLGRPIGSCNVSYNQSVQVSGTPYEEALDGSNASAISCSSQTSKLKPETIVKNKSEFKTSRKEAPNSFPSNVRTLISTGMLDGVPVKYISLAREELRGIIKGSGYLCGCQSCNFSKVLNAYEFERHAGSKTKHPNNHIYFENGKTIYQIVQELRSTPQSCLFDTIQTVFGAPINQKSFRIWKESFQAATRELQRIYGKEELNL 462
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 5803817 5805987 - Bpe004125.2 Bpe11g00777 110922
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g00777 462 Pfam Tify domain binding domain 357 412 IPR032308 -
Bpe11g00777 462 PANTHER DNA-BINDING PROTEIN 1 462 - -
Bpe11g00777 462 PANTHER AUTOIMMUNE REGULATOR 1 462 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe11g00777 Bpe-Chr11:5803817 Bpe01g00222 Bpe-Chr1:1349646 1.33E-17 dispersed
Bpe11g00777 Bpe-Chr11:5803817 Bpe15g01101 Bpe-Chr15:20165464 1.29E-26 wgd
Bpe11g00777 Bpe-Chr11:5803817 Bpe04g01846 Bpe-Chr4:23696497 3.62E-19 wgd
Bpe11g00777 Bpe-Chr11:5803817 Bpe04g01608 Bpe-Chr4:22254873 6.87E-44 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g00777 - - qsu:111988714 563.533