Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g00795 ATGGCGGATATGACTCAGAATAGCGTCGCTGATTTTCCTGCTGTCCCGACTCACGGAGGTCAATTCGTCCAGCACAACATATTCGGAAATTTCTTTGAGATCACTGCCAAGTATCGTCCTCCGATCATGCCGATAGGTCGGGGAGCATACGGAATCGTCTGCTCGGTTTTAAACGCAGAAACCAACGAGATGGTTGCGATAAAGAAAATTGCCAACGCGTTTGACAATCACATGGATGCAAAGCGAACGCTCAGAGAGATTAAGCTGCTTCGGCATTTGGATCACGAGAACATCATAGGTATTAGAGACGTTATTCCTCCACCTTTACGAAGAGAATTTACAGATGTCTACGTTGCCACCGAGCTAATGGATACTGACCTTCACCAAATAATACGCTCCAATCAAGGTTTATCTGAAGAGCACTGTCAGTATTTCCTTTATCAGATTCTCAGAGGATTGAAGTACATCCACTCGGCCAACATTATTCACAGAGACTTGAAACCAAGCAACCTACTGCTCAATGCAAATTGTGACCTTAAAATTTGTGATTTTGGTCTTGCTCGACCAACCTCTGAGAATGAATTCATGACGGAATATGTCGTCACAAGATGGTACAGAGCGCCCGAATTGCTGTTGAATTCCTCTGACTATACTGCTGCCATCGATGTTTGGTCCGTGGGATGCATTTTTTTGGAGCTTATGAATAGACAACCATTGTTTCCAGGCAGGGATCACGTGCATCAAATGCGTTTGTTAACAGAGCTTCTTGGAACACCTACTGAGTCTGATCTTGGGTTTGTTAGAAATGAGGACGCTAGAAGATATATTCGACAACTTCCACAACACCCTCGTCAACCACTCACGGTGGTGTTTCCTCATGTTCATCCCTTAGCAATTGATCTTATTGACAAGATGTTGACTTTTGATCCCACAAGGAGAATAACTGTTGAAGAAGCCTTAGCCCATCCATATCTTGAAAGATTACATGACATAGCTGATGAGCCTGTCTGCCCTGAGCCTTTCTCCTTCGACTTTGAGCAACAACCTTTAGGAGAAGAGCAAATGAAGGATATGATTTACATGGAGGCCTTATCATTCAATCCTCACCTTGCATAA 1116 43.73 MADMTQNSVADFPAVPTHGGQFVQHNIFGNFFEITAKYRPPIMPIGRGAYGIVCSVLNAETNEMVAIKKIANAFDNHMDAKRTLREIKLLRHLDHENIIGIRDVIPPPLRREFTDVYVATELMDTDLHQIIRSNQGLSEEHCQYFLYQILRGLKYIHSANIIHRDLKPSNLLLNANCDLKICDFGLARPTSENEFMTEYVVTRWYRAPELLLNSSDYTAAIDVWSVGCIFLELMNRQPLFPGRDHVHQMRLLTELLGTPTESDLGFVRNEDARRYIRQLPQHPRQPLTVVFPHVHPLAIDLIDKMLTFDPTRRITVEEALAHPYLERLHDIADEPVCPEPFSFDFEQQPLGEEQMKDMIYMEALSFNPHLA 371
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 5949025 5951872 + Bpe004143.1 Bpe11g00795 110940
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g00795 371 SMART serkin_6 39 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe11g00795 371 ProSiteProfiles Protein kinase domain profile. 39 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe11g00795 371 ProSitePatterns MAP kinase signature. 74 177 IPR003527 GO:0004707|GO:0005524|GO:0006468
Bpe11g00795 371 ProSitePatterns Protein kinases ATP-binding region signature. 45 69 IPR017441 GO:0005524
Bpe11g00795 371 ProSitePatterns Serine/Threonine protein kinases active-site signature. 161 173 IPR008271 GO:0004672|GO:0006468
Bpe11g00795 371 SUPERFAMILY Protein kinase-like (PK-like) 44 332 IPR011009 -
Bpe11g00795 371 Gene3D Transferase(Phosphotransferase) domain 1 123 352 - -
Bpe11g00795 371 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 16 369 - -
Bpe11g00795 371 Pfam Protein kinase domain 44 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe11g00795 371 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 16 369 - -
Bpe11g00795 371 CDD STKc_TEY_MAPK 32 368 - -
Bpe11g00795 371 Gene3D Phosphorylase Kinase; domain 1 22 362 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe10g00757 Bpe-Chr10:13852970 Bpe11g00795 Bpe-Chr11:5949025 0 dispersed
Bpe11g00795 Bpe-Chr11:5949025 Bpe11g01839 Bpe-Chr11:14808273 0 dispersed
Bpe11g00794 Bpe-Chr11:5943999 Bpe11g00795 Bpe-Chr11:5949025 0 tandem
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63574 PF00069 Pkinase 7.20E-74 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g00795 K20536 - vvi:100263976 699.508