Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe11g00799 | ATGGAGACCAGTGAAACAAATACTTCTACTTCATCAAACCCTGCAACTTCTTTATCGCCGGCATCATCGTCTTCTCCTTCACCTCCGGCGACTACTCCGGTCACGACCATGCATGTAATTCTCAGTCCTTGCGCAGCATGCAAGATTTTGCGGCGAAGATGCGCTGATAAATGTGTACTGGCGCCGTACTTCCCTCCCACCGAGCCCGCGAAGTTTACCATAGCTCATCGAGTTTTTGGCGCCAGCAATATCATCAAGTTTCTGCAGGCATATCAAAGGGCAGACGCAGTTAGCAGCATGGTGTATGAAGCAAGTGCGAGAATAAGAGATCCAGTTTACGGATGTGCAGGCGCCATTTGCCAACTTCAGAAGCAAGTGAACGAGCTTCAAGCCGAATTAGCAAAAACACAGGCCGAGCTCGTCAACATGCAGTGTCAACAGACCAATCTCGTCTCTGTCATTTGCAGAGAGTTTTCTCAGTCCTCTCAGCCATGGCCGAATGAGCATCAATCTATTGATAATTTCATTCAAAACGACCCTCATTCGTACGCGACGAACAACCCAAGCTTATTCGAAGACGGGTCTTTGTGGGAGCCTCTGTGGACTTGA | 609 | 48.77 | METSETNTSTSSNPATSLSPASSSSPSPPATTPVTTMHVILSPCAACKILRRRCADKCVLAPYFPPTEPAKFTIAHRVFGASNIIKFLQAYQRADAVSSMVYEASARIRDPVYGCAGAICQLQKQVNELQAELAKTQAELVNMQCQQTNLVSVICREFSQSSQPWPNEHQSIDNFIQNDPHSYATNNPSLFEDGSLWEPLWT | 202 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 5972106 | 5973182 | + | Bpe004147.1 | Bpe11g00799 | 110944 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe11g00799 | 202 | MobiDBLite | consensus disorder prediction | 1 | 32 | - | - | |
Bpe11g00799 | 202 | ProSiteProfiles | LOB domain profile. | 42 | 140 | IPR004883 | - | |
Bpe11g00799 | 202 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 4-RELATED | 29 | 201 | - | - | |
Bpe11g00799 | 202 | Coils | Coil | 119 | 146 | - | - | |
Bpe11g00799 | 202 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 1 | 29 | 201 | - | - | |
Bpe11g00799 | 202 | Pfam | Lateral organ boundaries (LOB) domain | 43 | 137 | IPR004883 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe08g00658 | Bpe-Chr8:6827231 | Bpe11g00799 | Bpe-Chr11:5972106 | 7.66E-59 | dispersed | |
Bpe11g00799 | Bpe-Chr11:5972106 | Bpe15g01174 | Bpe-Chr15:20604486 | 1.03E-47 | dispersed | |
Bpe11g00799 | Bpe-Chr11:5972106 | Bpe15g01073 | Bpe-Chr15:19963663 | 5.49E-70 | wgd | |
Bpe11g00799 | Bpe-Chr11:5972106 | Bpe04g01869 | Bpe-Chr4:23824443 | 4.69E-69 | wgd | |
Bpe11g00799 | Bpe-Chr11:5972106 | Bpe08g01337 | Bpe-Chr8:14548087 | 1.06E-111 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
22060 | PF03195 | LOB | 1.70E-37 | No_clan | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe11g00799 | - | - | minc:123208287 | 266.929 |