Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g00813 ATGGCTATGGCGGTGGCCCATCAAAGGGAGAGCAGTAGCGGAAGCATAACTAAACACCTAGATAGCTCTGGAAAGTACGTCCGGTACACCGCCGAGCAGGTCGAAGCTCTGGAGCGAGTCTACGCCGAGTGCCCCAAGCCAAGCTCTCTACGCAGGCAACAGTTGATCCGAGAATGTCCGATTCTTGCCAACATCGAACCCAAACAGATCAAAGTCTGGTTTCAAAATCGCAGGTGTAGAGAAAAGCAGAGAAAGGAGTCCTCAAGGCTACAAACAGTAAACCGGAAATTGACAGCCATGAACAAGCTTTTGATGGAGGAGAATGATCGCTTGCAGAAACAAGTGTCACAGCTCGTGTGTGAAAATGGGTTCATGAAGCAGCAATTGCATACACCATCTGGTGCAGCTGCTGATGCTAGCTGTGACTCTGTGGTTACCACTCCTCAGCATACTCTCAGAGATGCCAATAATCCTGCTGGACTCCTCTCCATTGCAGATGAGATCTTGTCAGAGTTTATTTCAAAGGCTACAGGAACTGCTGTCGATTGGGTCCAGATGCCTGGGATGAAGCCTGGTCCGGATTCGGTTGGGATCTTTGCGATTTCTCATTGTTGTAGTGGAGTGGCAGCTCGAGCCTGTGGTCTCGTTAGTTTAGAACCTACAAAGATTGCAGAGATTCTCAAAGATAAACCATCCTGGTTTCGGCAATGTCGGAACCTTGAAGTCTTCACCATGTTTCCTGCCGGAAATGGCGGAACTATTGAGCTTGTTTACACACAGGTTTTCGCCCCGACTACGCTGGCACCTGCTCGGGATTTCTGGACGCTCCGATTCACTACCACTTTAGATAATGGAAGCATTGTGGTCTGTGAGAGATCCCTTTCAGGATCTGGTGCTGGCCCGAATACAGCCGCTGCATCTCAGTTTGTGCGAGCTGAGATGCTTCCAAGTGGCTATCTGATTCGCCCTTGTGAGGGTGGAGGGTCGATAATACATATTGTTGACCATCTAAATCTTGAGGCATGGAGTGTGCCTGAGGTGCTTCGGCCACTTTATGAATCTTCAAAAGCAGTGGCTCAGAAATTAACTATAGCTGCATTGCGTTATGTCAGGCAAATAGCTCAGGAGACTAGTGGAGAGGTTGTATATGGTTTGGGAAGACAGCCAGCAGTTCTTCGAACGTTTAGCCATAGATTGAGCCGTGGCTTTAATGATGCTGTGAATGGATTTAATGACGATGGATGGTCATTAATTAACTGCGATGGGGCCGAAGATGTAATACTTGCTGTGAACTCAGCCAAGAATATAAGCTCGAGTTCTAATTCTTCGAATTCTCTAGCTTTTCTAGGAGGAATTCTTTGTGCGAAGGCATCGATGCTTCTCAAAAATGTTCCTCCAGCCGTGCTTGTTCGGTTCTTGAGAGAGCATCGCTCAGAATGGGCTGATTTTAACATCGATGCTTATTCGGCATCTTCATTGAAAGCTGGCTCTTATCCCTATCCTGGTATCCGACCAATGAGGTTTACCGGAAGTCAAATTATAATTCCCCTTGGTCATACTATCGAACAAGAAGAGTTGCTTGAAGTTGTTCGGCTCGAAGGTCATTCTCTTGCTCCGGAAGATCCATTTGTATCGAGGGACATTCATCTTTTGCAGATTTGTAGTGGCATTGATGAGAATGCTGTGGGAGCTTCATCGGAACTGATATTTGCCCCGATCGATGAAATGTTTCCCGACGATGCCCCTCTGCTTCCTTCCGGTTTCAGAATCATTCCTCTCGATCCAAAAACAGATGACACGAAGGATTTGCTGGCCGCACATCGGACCCTTGATTTGGCCTCCAGTCTCGAAGTCGGAACGAGCAGTGGAGATGCATTGTCATCTCAGAATTCACGATCTGTTTTGACCATTGCTTTTCAGTTTCCTTTTGAGACGAGCCTTCAAAATAATGTTGCAGCCATGGCTCGACAGTACGTACGGAGTGTGATATCTTCGGTTCAGAGGGTTGCTGTTGCCATTTCTCCATCCAGGCTTGGTCCCGGTCTTGAACCGAAGATTTCTACTGGCTCTCCCGAGGCTCATACTCTAGCACACTGGATCTGCCAAAGCTATAGTTACCATATTGGAGCAAATTTGTTACCATCAGACTCGGACAATGGAGAGGCCGTACTAAAACATCTATGGAATCATCAAGATGCGATTTTGTGCTGTTCATTGAAGTTGCTACCGGTTTTCACGTTCGCCAACCAAGCGGGCCTTGACATGCTGGAGACAACTCTAGTTGCGCTACAAGACATCTCTTTGGACAAAATTTTTGATGAATCCGGACGGAAGACTTTGTGTTCAGAATTTGCCAAGTTAAAGCAGCAGGGATTTGCTTACCTGCCGGCTGGAATCTGCATGTCGACAATGGGGCGGCATGTTTCGTTCGAGCAAGCTGTTGCTTGGAAAGTGATTGCCTCTGAAGATAATACTGTTCATTGCTTAGCCTTCTCTTTCGTAAACTGGTCTTTTGTTTGA 2520 47.06 MAMAVAHQRESSSGSITKHLDSSGKYVRYTAEQVEALERVYAECPKPSSLRRQQLIRECPILANIEPKQIKVWFQNRRCREKQRKESSRLQTVNRKLTAMNKLLMEENDRLQKQVSQLVCENGFMKQQLHTPSGAAADASCDSVVTTPQHTLRDANNPAGLLSIADEILSEFISKATGTAVDWVQMPGMKPGPDSVGIFAISHCCSGVAARACGLVSLEPTKIAEILKDKPSWFRQCRNLEVFTMFPAGNGGTIELVYTQVFAPTTLAPARDFWTLRFTTTLDNGSIVVCERSLSGSGAGPNTAAASQFVRAEMLPSGYLIRPCEGGGSIIHIVDHLNLEAWSVPEVLRPLYESSKAVAQKLTIAALRYVRQIAQETSGEVVYGLGRQPAVLRTFSHRLSRGFNDAVNGFNDDGWSLINCDGAEDVILAVNSAKNISSSSNSSNSLAFLGGILCAKASMLLKNVPPAVLVRFLREHRSEWADFNIDAYSASSLKAGSYPYPGIRPMRFTGSQIIIPLGHTIEQEELLEVVRLEGHSLAPEDPFVSRDIHLLQICSGIDENAVGASSELIFAPIDEMFPDDAPLLPSGFRIIPLDPKTDDTKDLLAAHRTLDLASSLEVGTSSGDALSSQNSRSVLTIAFQFPFETSLQNNVAAMARQYVRSVISSVQRVAVAISPSRLGPGLEPKISTGSPEAHTLAHWICQSYSYHIGANLLPSDSDNGEAVLKHLWNHQDAILCCSLKLLPVFTFANQAGLDMLETTLVALQDISLDKIFDESGRKTLCSEFAKLKQQGFAYLPAGICMSTMGRHVSFEQAVAWKVIASEDNTVHCLAFSFVNWSFV 839
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 6065519 6069801 + Bpe004159.1 Bpe11g00813 110958
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g00813 839 CDD START_ArGLABRA2_like 158 374 - -
Bpe11g00813 839 Gene3D - 18 91 - -
Bpe11g00813 839 Gene3D - 200 379 IPR023393 -
Bpe11g00813 839 SMART START_1 163 373 IPR002913 GO:0008289
Bpe11g00813 839 SUPERFAMILY Homeodomain-like 21 86 IPR009057 -
Bpe11g00813 839 Pfam MEKHLA domain 695 838 IPR013978 -
Bpe11g00813 839 ProSiteProfiles START domain profile. 154 382 IPR002913 GO:0008289
Bpe11g00813 839 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN REVOLUTA 1 839 - -
Bpe11g00813 839 Coils Coil 94 121 - -
Bpe11g00813 839 CDD bZIP 77 116 - -
Bpe11g00813 839 ProSiteProfiles 'Homeobox' domain profile. 20 84 IPR001356 GO:0003677
Bpe11g00813 839 SMART HOX_1 22 88 IPR001356 GO:0003677
Bpe11g00813 839 CDD homeodomain 25 85 IPR001356 GO:0003677
Bpe11g00813 839 Pfam START domain 164 372 IPR002913 GO:0008289
Bpe11g00813 839 Pfam Homeodomain 25 83 IPR001356 GO:0003677
Bpe11g00813 839 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 1 839 IPR044830 GO:0003700
Bpe11g00813 839 SUPERFAMILY Bet v1-like 163 375 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe08g01320 Bpe11g00813 CCT
Bpe08g01320 Bpe11g00813 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00484 Bpe-Chr1:3005518 Bpe11g00813 Bpe-Chr11:6065519 0 dispersed
Bpe10g00665 Bpe-Chr10:13226686 Bpe11g00813 Bpe-Chr11:6065519 0 dispersed
Bpe11g00813 Bpe-Chr11:6065519 Bpe03g00637 Bpe-Chr3:26570019 2.85E-24 dispersed
Bpe11g00813 Bpe-Chr11:6065519 Bpe08g01320 Bpe-Chr8:14447614 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22061 PF01852 START 7.10E-45 CL0209 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g00813 K09338 - qsu:112038274 1438.32