Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g00825 ATGGAGAAATCTGGGTATGGGCGCGACGGCGTTTACAGGTCTCTCAGACCCGCACTTTCCGTTCCCCAAGACCCTGACCTGTCTATGGTCTCCTTCCTCTTCAGAAACTCCTCTTCTTACTCACACAAACCCGCCCTGATCGACGCCGATTGTTCTGAGACCCTCTCATTTTCCCTGCTCAAATCCATGGTGATTAAGGTCTCCCATGGCTTACTTCATTTGGGTATTAAGAAGAACGACGTTGTTCTGATTTTCGCTCCCAATTCAATCCAATTTCCAATCTGTTTCCTCGGAATTATAGCCATCGGAGCTATTGCGACCACTTGTAATCCGACTTACACAGTCTCTGAACTGACAAAGCAAACCAAAGATTCGAAACCGAAGCTTGTAATCACCGTCTCTGAGTTATGGGACAAAGCGATGAATTTGAATCTCCCGACAGTGTTACTCGGACCAGAAGGATCATCTCCGCCGTCGATGAATTCGACGATACTAAACTTCCACGACTTGGTCCAATGGGGACGGTCGGAGACCCATTTTCCGGCGGTGAAAGTGAAGCAAACGGACACAGCCGTTCTTCTGTACTCATCGGGAACAACAGGTACGAGTAAGGGCGTGATTCTCTCTCACAGAAATTTCATAGCGGCGTCTCTAATGATCACACAGGACCAACAAATGGCGGGAGAAATGCACAACGTTTATCTCAATGTTTTGCCTCTTTTCCATGTTTTTGGACTGTCTTGTGTTACATTTGCACAGCTTCAGATAGGCAATCCGATCGTGTTAATGTCTAAATTCAATTTAGAAAAGTTTATCTCGGCCATCGAGAAGTATAAGGTTACTGATGTGTGGGTTGTGCCTCCAATCGTGCTGGCTTTGGCCAAGCAAAGGGTGGTTAAAAAGTATAATCTTTCCTCGTTGAGGCATATTGGTTCCGGGGCTGCACCTTTGGGCAAAGACTTAATGGACGAGTGTGCTAAGAACATTCCTAGTGCTCGGGTTATTCAGGGATATGGTATGACTGAAACTTGCGGAATTATTTCGTTAGAGAACCCACGAGTGGGAGTTCGAAATTCGGGTACGGCTGGAAAACTTGTCGGAGGAGTTGAGGCACAAATTATCAGTGTTGATACATTGAAGCCTCTCCCTCCTAATCAAACTGGAGAGATAAGGGTTAGAGGGCCTAATATGATGCAAGGTTATTTCAACAATCCTCAGGCCACGATCCAGACCATTGATCAAAGTGGCTGGGTACACACAGGAGATCTCGGATATTTTGACGAAAGTGGACGTCTCTTTGTGCTCGATCGAATCAAAGAGCTTATTAAGTTCAAAGGTTTTCAGATTGCACCAGCCGAGCTCGAAGGGCTGCTAGTTTCTCACCCGGAAATATTAGATTCTGTTGTCATCCCATTCCCGGATGCTGAAGCCGGCGAGGTCCCTATCGCGTTCGTAGTTCGCTCTCCGAATAGTTCACTCACAGAAGAAGACATAATCAAATTCATTTCCAAACTGGTGGCACCGTTCAAGAGAATACGACGCGTAACATTCGTGAACAGCGTGCCTAAGTCGGCTTCTGGGAAGATCCTGCGGCGAGAGCTGATCGAGAAAGTTCGATCCAAAATCTGA 1629 46.59 MEKSGYGRDGVYRSLRPALSVPQDPDLSMVSFLFRNSSSYSHKPALIDADCSETLSFSLLKSMVIKVSHGLLHLGIKKNDVVLIFAPNSIQFPICFLGIIAIGAIATTCNPTYTVSELTKQTKDSKPKLVITVSELWDKAMNLNLPTVLLGPEGSSPPSMNSTILNFHDLVQWGRSETHFPAVKVKQTDTAVLLYSSGTTGTSKGVILSHRNFIAASLMITQDQQMAGEMHNVYLNVLPLFHVFGLSCVTFAQLQIGNPIVLMSKFNLEKFISAIEKYKVTDVWVVPPIVLALAKQRVVKKYNLSSLRHIGSGAAPLGKDLMDECAKNIPSARVIQGYGMTETCGIISLENPRVGVRNSGTAGKLVGGVEAQIISVDTLKPLPPNQTGEIRVRGPNMMQGYFNNPQATIQTIDQSGWVHTGDLGYFDESGRLFVLDRIKELIKFKGFQIAPAELEGLLVSHPEILDSVVIPFPDAEAGEVPIAFVVRSPNSSLTEEDIIKFISKLVAPFKRIRRVTFVNSVPKSASGKILRRELIEKVRSKI 542
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 6153213 6155768 - Bpe004169.1 Bpe11g00825 110970
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g00825 542 CDD 4CL 21 534 - -
Bpe11g00825 542 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 4 541 - -
Bpe11g00825 542 SUPERFAMILY Acetyl-CoA synthetase-like 22 540 - -
Bpe11g00825 542 Pfam AMP-binding enzyme C-terminal domain 453 528 IPR025110 -
Bpe11g00825 542 ProSitePatterns Putative AMP-binding domain signature. 193 204 IPR020845 -
Bpe11g00825 542 Pfam AMP-binding enzyme 35 444 IPR000873 -
Bpe11g00825 542 PANTHER 4-COUMARATE:COA LIGASE-LIKE PROTEIN 4 541 - -
Bpe11g00825 542 Gene3D - 9 439 IPR042099 -
Bpe11g00825 542 Gene3D - 440 541 IPR045851 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe08g01305 Bpe11g00825 CCT
Bpe08g01305 Bpe11g00825 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g01571 Bpe-Chr4:22045519 Bpe11g00825 Bpe-Chr11:6153213 0 dispersed
Bpe07g00938 Bpe-Chr7:15264246 Bpe11g00825 Bpe-Chr11:6153213 2.44E-59 dispersed
Bpe08g01491 Bpe-Chr8:15606590 Bpe11g00825 Bpe-Chr11:6153213 4.43E-64 dispersed
Bpe09g00463 Bpe-Chr9:12619951 Bpe11g00825 Bpe-Chr11:6153213 9.87E-137 dispersed
Bpe10g00580 Bpe-Chr10:12764074 Bpe11g00825 Bpe-Chr11:6153213 3.04E-107 dispersed
Bpe11g00304 Bpe-Chr11:2228801 Bpe11g00825 Bpe-Chr11:6153213 1.73E-143 dispersed
Bpe11g00825 Bpe-Chr11:6153213 Bpe13g00207 Bpe-Chr13:10124954 5.16E-132 dispersed
Bpe13g00206 Bpe-Chr13:10082510 Bpe11g00825 Bpe-Chr11:6153213 8.03E-131 dispersed
Bpe01g00480 Bpe-Chr1:2978952 Bpe11g00825 Bpe-Chr11:6153213 6.04E-43 transposed
Bpe11g00825 Bpe-Chr11:6153213 Bpe08g01305 Bpe-Chr8:14351894 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g00825 K01904 - zju:107411478 818.92