Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g00830 ATGTTTAATCAGTTCAAAGCTTCTGCAAACCCTATAATGCAGCTCCAAGGTTTTGAAGTGGAGCTTCATGATTTCATCGAGAATTCTGATTTCGACCAGTTCGTCGATCTAATCAGGGGAGAAGACGAAAACCCGCTTCTCAATTTCGATCGGGATCTCATCACAAATGGGTGTTGTTTAGATGATCAGTTTGGTTCATCAAACGGAAGAGATGTCTTGGACTTCAATGGCGTTGCTGGATCAGACAGCCCAGAGTTCATGATGTTTAACAGATCGGAGAAATTTGACGACGGAGAAGTGATCGGAGGAGGTGAAGAAGACGTTGGAGAGGATTCTTCTGCTACAACTACGACAGGGACGAATAACACGACGACGAAGAGGGATAAGGTTGATAGATCGAGAACTTTGATTTCAGAGAGAAGAAGAAGAGGAAGGATGAAAGAGAAGCTTTATGCATTGCGTTCTTTGGTTCCAAACATAACCAAGATGGATAAAGCCTCCATTGTCGGAGATGCTGTATTATACGTACAAGAGCTGCAAATGCAGGCGAAAAAACTCAAGACTGAGATAAAAGGCATCGAAGCATCAATGGAAAGAGCAGACAGATATCAAGTAAGTCAAAACAACCGTAAGAAGATTCATCATCCTCCTAACTCTACCTGCTTGGCTTCAAAGAAAATCATACAGATGGACATTTTTCAAGTAGAGGAAAGAGGGTTTTACTTGAGAATAGTGTGCGACAAAGGTTATGGAGTCGCCTTGTCTCTTTATAAAGTTCTTGAATCTATGATGGGTTTTGATGTTCAGAGCTCGAATTTGATGACGACTGCTGAAAGATTTGTTTTAGCTGCAACTCTCAATGTGATGAAAGATTGCGAGCAGGAGATGAATTTGCCAAAGTTGAAGCTTTGGTTGACTGGAGCTCTTCTTAGCCATGGATTTGAGTTTTAA 951 41.43 MFNQFKASANPIMQLQGFEVELHDFIENSDFDQFVDLIRGEDENPLLNFDRDLITNGCCLDDQFGSSNGRDVLDFNGVAGSDSPEFMMFNRSEKFDDGEVIGGGEEDVGEDSSATTTTGTNNTTTKRDKVDRSRTLISERRRRGRMKEKLYALRSLVPNITKMDKASIVGDAVLYVQELQMQAKKLKTEIKGIEASMERADRYQVSQNNRKKIHHPPNSTCLASKKIIQMDIFQVEERGFYLRIVCDKGYGVALSLYKVLESMMGFDVQSSNLMTTAERFVLAATLNVMKDCEQEMNLPKLKLWLTGALLSHGFEF 316
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 6188792 6191403 + Bpe004174.1 Bpe11g00830 110975
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g00830 316 Gene3D - 120 196 IPR036638 GO:0046983
Bpe11g00830 316 Coils Coil 176 196 - -
Bpe11g00830 316 MobiDBLite consensus disorder prediction 100 132 - -
Bpe11g00830 316 SMART finulus 136 185 IPR011598 GO:0046983
Bpe11g00830 316 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 130 179 IPR011598 GO:0046983
Bpe11g00830 316 MobiDBLite consensus disorder prediction 110 124 - -
Bpe11g00830 316 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 96 315 - -
Bpe11g00830 316 PANTHER TRANSCRIPTION FACTOR FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR 96 315 - -
Bpe11g00830 316 Pfam Helix-loop-helix DNA-binding domain 135 180 IPR011598 GO:0046983
Bpe11g00830 316 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 129 194 IPR036638 GO:0046983
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe01g00218 Bpe11g00830 CCT
Bpe08g01301 Bpe11g00830 CCT
Bpe08g00180 Bpe11g00830 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe11g00830 Bpe-Chr11:6188792 Bpe13g01099 Bpe-Chr13:16569000 8.45E-20 dispersed
Bpe01g00218 Bpe-Chr1:1340377 Bpe11g00830 Bpe-Chr11:6188792 1.38E-113 wgd
Bpe11g00830 Bpe-Chr11:6188792 Bpe08g00180 Bpe-Chr8:994639 4.18E-91 wgd
Bpe11g00830 Bpe-Chr11:6188792 Bpe08g01301 Bpe-Chr8:14326376 2.57E-152 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22063 PF00010 HLH 4.00E-09 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g00830 - - qsu:112032263 319.701