Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe11g00830 | ATGTTTAATCAGTTCAAAGCTTCTGCAAACCCTATAATGCAGCTCCAAGGTTTTGAAGTGGAGCTTCATGATTTCATCGAGAATTCTGATTTCGACCAGTTCGTCGATCTAATCAGGGGAGAAGACGAAAACCCGCTTCTCAATTTCGATCGGGATCTCATCACAAATGGGTGTTGTTTAGATGATCAGTTTGGTTCATCAAACGGAAGAGATGTCTTGGACTTCAATGGCGTTGCTGGATCAGACAGCCCAGAGTTCATGATGTTTAACAGATCGGAGAAATTTGACGACGGAGAAGTGATCGGAGGAGGTGAAGAAGACGTTGGAGAGGATTCTTCTGCTACAACTACGACAGGGACGAATAACACGACGACGAAGAGGGATAAGGTTGATAGATCGAGAACTTTGATTTCAGAGAGAAGAAGAAGAGGAAGGATGAAAGAGAAGCTTTATGCATTGCGTTCTTTGGTTCCAAACATAACCAAGATGGATAAAGCCTCCATTGTCGGAGATGCTGTATTATACGTACAAGAGCTGCAAATGCAGGCGAAAAAACTCAAGACTGAGATAAAAGGCATCGAAGCATCAATGGAAAGAGCAGACAGATATCAAGTAAGTCAAAACAACCGTAAGAAGATTCATCATCCTCCTAACTCTACCTGCTTGGCTTCAAAGAAAATCATACAGATGGACATTTTTCAAGTAGAGGAAAGAGGGTTTTACTTGAGAATAGTGTGCGACAAAGGTTATGGAGTCGCCTTGTCTCTTTATAAAGTTCTTGAATCTATGATGGGTTTTGATGTTCAGAGCTCGAATTTGATGACGACTGCTGAAAGATTTGTTTTAGCTGCAACTCTCAATGTGATGAAAGATTGCGAGCAGGAGATGAATTTGCCAAAGTTGAAGCTTTGGTTGACTGGAGCTCTTCTTAGCCATGGATTTGAGTTTTAA | 951 | 41.43 | MFNQFKASANPIMQLQGFEVELHDFIENSDFDQFVDLIRGEDENPLLNFDRDLITNGCCLDDQFGSSNGRDVLDFNGVAGSDSPEFMMFNRSEKFDDGEVIGGGEEDVGEDSSATTTTGTNNTTTKRDKVDRSRTLISERRRRGRMKEKLYALRSLVPNITKMDKASIVGDAVLYVQELQMQAKKLKTEIKGIEASMERADRYQVSQNNRKKIHHPPNSTCLASKKIIQMDIFQVEERGFYLRIVCDKGYGVALSLYKVLESMMGFDVQSSNLMTTAERFVLAATLNVMKDCEQEMNLPKLKLWLTGALLSHGFEF | 316 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 6188792 | 6191403 | + | Bpe004174.1 | Bpe11g00830 | 110975 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe11g00830 | 316 | Gene3D | - | 120 | 196 | IPR036638 | GO:0046983 | |
Bpe11g00830 | 316 | Coils | Coil | 176 | 196 | - | - | |
Bpe11g00830 | 316 | MobiDBLite | consensus disorder prediction | 100 | 132 | - | - | |
Bpe11g00830 | 316 | SMART | finulus | 136 | 185 | IPR011598 | GO:0046983 | |
Bpe11g00830 | 316 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 130 | 179 | IPR011598 | GO:0046983 | |
Bpe11g00830 | 316 | MobiDBLite | consensus disorder prediction | 110 | 124 | - | - | |
Bpe11g00830 | 316 | PANTHER | TRANSCRIPTION FACTOR SCREAM2-RELATED | 96 | 315 | - | - | |
Bpe11g00830 | 316 | PANTHER | TRANSCRIPTION FACTOR FER-LIKE IRON DEFICIENCY-INDUCED TRANSCRIPTION FACTOR | 96 | 315 | - | - | |
Bpe11g00830 | 316 | Pfam | Helix-loop-helix DNA-binding domain | 135 | 180 | IPR011598 | GO:0046983 | |
Bpe11g00830 | 316 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 129 | 194 | IPR036638 | GO:0046983 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bpe01g00218 | Bpe11g00830 | CCT | |
Bpe08g01301 | Bpe11g00830 | CCT | |
Bpe08g00180 | Bpe11g00830 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe11g00830 | Bpe-Chr11:6188792 | Bpe13g01099 | Bpe-Chr13:16569000 | 8.45E-20 | dispersed | |
Bpe01g00218 | Bpe-Chr1:1340377 | Bpe11g00830 | Bpe-Chr11:6188792 | 1.38E-113 | wgd | |
Bpe11g00830 | Bpe-Chr11:6188792 | Bpe08g00180 | Bpe-Chr8:994639 | 4.18E-91 | wgd | |
Bpe11g00830 | Bpe-Chr11:6188792 | Bpe08g01301 | Bpe-Chr8:14326376 | 2.57E-152 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
22063 | PF00010 | HLH | 4.00E-09 | No_clan | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe11g00830 | - | - | qsu:112032263 | 319.701 |