Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe11g00832 | ATGATTCCGGAGGTAATATCGTGCTTCCCCGGCGCAGGTCAGGATCTACGAATCTACTCCATTTCAGAAGATCAGACGAACTCAAAAGCAGAAACTCATCACTCGAGCTCTCTCCTTTACAGTCTCTCTATTCTCAAAGACAAGGTTCATCAGGTCGAATCTGTAGTCACCCTCTTTCTCTCTCAAGATCAAGTAAATCCAGATTCATCTTCATTAGCAATCGCCAGCATAAACTCGCTGATTCAAGACGTCATCTTGACTGCTTCTTCCATGCTGTTAACTCCTCCAGAAACAGCTCCGTCTGGTTCTAACCCTTGTAATATGATCAACGTCGATGAATCAAACCCCTTCCAAGCAATTCATGGGAAAGAGTTCCATCCAAGTGAAACGATGTCACTTAACTGGTGCGCAACCGGAAGCTTCAGCAATGGCGGCCTAACAATTAACGGTCAGAATTACGATGAAAAGAAAGAAGAGCGTCAAAATCTTTCTCCTAAGAACGATGATATCATAGAATTTGATGTCGCACATCTATTAGCAAAGTACACCCATTATTGCCAAGTCTGCGGAAAAGGATTCAAACGTGATGCGAATTTAAGAATGCATATGAGAGCACATGGCGAAGAGTATAAAACCAGTGCAGCTTTAAGCAACCCAGCGAAAAACAACAAAGAGTGGAAGACGATAGAGGATTTTCCGGGAAAATTGCCGAGAAAATACTCATGTCCACAACAAGGGTGCAGGTGGAATCAAAAACATCCCAAGTTTCAGCCTCTTAAGTCGATGATTTGCTTGAAGAATCACTACAAGAGAAGCCATTGCCCTAAAATGTACGTCTGCAAGAGGTGCAACAGAAAGCAATTTTCAGTTCTGTCTGATCTGAGAACCCACGAGAAGCACTGCGGAGATCTGAAATGGCAGTGTTCTTGCGGAACTACGTTTTCCAGAAAAGATAAGTTAGTGTGTCACGTTGCTCTGTTTGTCGGTCATTCGCCATTGATGAGTTCTCGAAGGTCTGAGAGCCAAACAACTAATTTGCAGCCAGATAATGCATGA | 1056 | 43.28 | MIPEVISCFPGAGQDLRIYSISEDQTNSKAETHHSSSLLYSLSILKDKVHQVESVVTLFLSQDQVNPDSSSLAIASINSLIQDVILTASSMLLTPPETAPSGSNPCNMINVDESNPFQAIHGKEFHPSETMSLNWCATGSFSNGGLTINGQNYDEKKEERQNLSPKNDDIIEFDVAHLLAKYTHYCQVCGKGFKRDANLRMHMRAHGEEYKTSAALSNPAKNNKEWKTIEDFPGKLPRKYSCPQQGCRWNQKHPKFQPLKSMICLKNHYKRSHCPKMYVCKRCNRKQFSVLSDLRTHEKHCGDLKWQCSCGTTFSRKDKLVCHVALFVGHSPLMSSRRSESQTTNLQPDNA | 351 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 6202693 | 6203748 | + | Bpe004176.1 | Bpe11g00832 | 110977 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe11g00832 | 351 | PANTHER | PROTEIN SENSITIVE TO PROTON RHIZOTOXICITY 1 | 23 | 343 | IPR044300 | GO:0010044|GO:0010447 | |
Bpe11g00832 | 351 | PANTHER | OS08G0562300 PROTEIN | 23 | 343 | - | - | |
Bpe11g00832 | 351 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 186 | 206 | IPR013087 | - | |
Bpe11g00832 | 351 | Gene3D | Classic Zinc Finger | 174 | 233 | - | - | |
Bpe11g00832 | 351 | SMART | c2h2final6 | 278 | 300 | IPR013087 | - | |
Bpe11g00832 | 351 | SMART | c2h2final6 | 184 | 206 | IPR013087 | - | |
Bpe11g00832 | 351 | SMART | c2h2final6 | 240 | 273 | IPR013087 | - | |
Bpe11g00832 | 351 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 184 | 211 | IPR013087 | - | |
Bpe11g00832 | 351 | SUPERFAMILY | beta-beta-alpha zinc fingers | 182 | 209 | IPR036236 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bpe08g01298 | Bpe11g00832 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe06g00083 | Bpe-Chr6:1141493 | Bpe11g00832 | Bpe-Chr11:6202693 | 2.04E-61 | dispersed | |
Bpe11g00832 | Bpe-Chr11:6202693 | Bpe04g01583 | Bpe-Chr4:22108697 | 8.77E-24 | dispersed | |
Bpe13g01331 | Bpe-Chr13:18557497 | Bpe11g00832 | Bpe-Chr11:6202693 | 1.33E-22 | dispersed | |
Bpe11g00832 | Bpe-Chr11:6202693 | Bpe08g01298 | Bpe-Chr8:14312392 | 3.28E-168 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
22065 | None | None | None | None | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe11g00832 | - | - | csin:114301238 | 383.645 |