Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g00840 ATGCCTCGACGTGGAGGCAGTAGTCGTGGAGGCGGTAGTCGTGGAGGCGGTCGTCGAGGAGCCTATTCCCATCGCGATCAACCGTCTTCTGCGATGAATCAGTCGGCCGATGAGCGAACTGGGAGAGGAAGCGATGCTGGAATATCCGTAGACAGCCGTGGTGCTTCTTCTGGTGTAAGTGGAAGCAGTGTTGGAAAAACTTCCGGCAGCGGTGGTGGGAGTGATGCGAAACGACCTTCTCAATCTGTTGTTGTTACTGCTTCTAAGGAATCTCCCACTGTGCCTACCTTGAGATCTGAACCTTCTTCTTCACGTCCGCAAACGTCCACTGATGCTGCTGAAATGAATTTGCTGATTAGAAAAGTTGAAAAGGCTACATTGCAGCCCGATCCACCACCTCCTGTTTCTTCCAAGGCTCTGAGCGTTCCAAGAAGACCGGGATATGGTACAGTGGGCAAAAAGATAGTTGTCCGAGCGAATCATTTTCTAGTGGAAGTTTCGGACAAAGATATCCATCATTACGATGTTTCAATCAAACCAGAAATCTTGTCTAAGAAGGTATGTAGATCCGTCATCAAGCGCCTCGAAGATATATACAAGGAGTCACACTTGAACAAAAGAATGTTGGCTTATGATGGAAGCAAAAGCCTATATACCGCCGGGGCGCTTCCATTTCAATCTAAGGAATTAGTTGTTGAGTTACCTGACAATCGATCTGAAACTTCTGCTTCTACTTCTACTAGAAGAGAACGCAAATTCACTGTGACAATTAACTATGCTTCAAAACCAGATATACATCATCTACAACAGTTTATTCGTGGTAGACAGTTGGATGTTCCTCAGGAAACAATACAAATGCTTGATGTTGTCCTAAGAGCATCACCATCCGCAGACTATACAGTTGTTGGTCGATCTTTTTTCTCGTTACAATTGGGACCTAAGGGTGAACTTGGGGATGGAGTGGAATATTGGAAGGGGTATTATCAGAGCCTTCGACCAACGCAGATGGGATTGTCCCTGAACATAGATATCTCAGCACGGTCCTTCTACGAACAAATCCTGGTGACTGATTTTGTTGCAAAATATTTTAATCTTAGAGATTTTTCGAGGCCATTATCTGACCAAGAACGTCTTAAGATTAAAAAAGCTCTTAGAGGAATTAAGGTGCGAATCACGTACAGCGAACATGCAAGAACATATAAAGTTACTGGAATTACCGCACAATCAATTAGCCAACTCGGGTTTCCTCTTGGCGATGATACAAAAAAAACATCAATTTTGCAATACTTCCAAGATAGATACGGCATTGGCTTGAAATATCTTACTTTGCCAGCATTGCAAGCTGGAAATGATCCATCGAATCCTATTTACTTGCCTATGGAGCTATGTGAGATTGTTGGTGGGCAAAGATATACGAAGAAGTTAAATGAACGCCAAGTTACTGCTCTTTTAAGAGCAACGTGTCAGCGCCCACCACAACGTGAAGATGGTATAAAGAAGATAGTTCAGAATAATAAGTACGGAGGAGACAAGCTTGTAAATAAAGAGTTTGAGATTAAAGTGAGAGAGGACCTGACTTCCGTAGATGCTCGTGTCCTACCTCCTCCAATGATTAAATATCATGATACAGGTAAAGAAACACGAGTAGACCCTAAGATGGGACAATGGAATATGATCAACAAGAAAATGGTAAACGGAGGCAGAGTAGAGTTGTGGACTTGTGTAAACTTCTCTTCACGTATAAATAGAAACTTGCCATTCGATTTCTGTCAGCAATTGATAGAGATGTGCAATAGTAAAGGAATGGATTTCAACCCAAATCCATTGATTCCAATAACTTTTGCCCAGTCTTCTCAAATTGAAAGGACACTTGGAGAAGTTCACAAAAAATCACAAGAAAGACTGAAAAATCTAAAGCGGGATGGTGATCGTTTACAGTTGTTAATTATTATTCTACCTGATTTTAGAAAGATAAAACGTGTGTGTGAAACTGAACTCGGAATAGTTTCTCAATGTTGTCAACCAAAGCAAGCCTCAAAAATGAGTATACAGTATTTTGAAAATGTTGCACTTAAAATCAATGTGAAGGTGGGAGGAAGAAATAGTGTATTAAATGATGCAATTCTCAGAAAAATTCCTTTTGTTTCTGATATGCCGACGATTGTCTTTGGTGCTGATGTGACGCATCCCGCGCCAGGCGAAGACTCGAGCCCGTCCATAGCAGCTGTTGTCGCCTCTATGGATTGGCCGGAAGTTACTAAGTATAAAGGACTTATTTCTTCTCAATCACATCGGGAAGAAATTATTCAAGATCTATACAAGTTAGTCCAAGATCCTCAACGAGGATTAGTGCATGGTGGAATGATCAGGGAACTTTTGGTCTCTTTTTATAAATCTACTGGTCTAAAGCCCCACAGAATTTTATTTTACAGAGATGGAGTAAGTGAGGGTCAATTCAATCAGGTTTTGTTATATGAGATGGATGCCATCCGAAAGGCATGTGCCGCACTACAGGAAGGATATCAACCTCCAGTTACTTTTATTGTGGTGCAAAAGAGACATCATACACGATTATTTCCAGCTGATAATCGCAACCTTGATCGAAGTGGAAATATACTACCAGGCACTGTCGTAGACACAAAAATTTGTCATCCCACAGAATTTGATTTTTACCTCAACAGCCATGCTGGCATTCAGGGAACAAGCCGACCAGCGCATTATCATGTGTTGTACGACGAGAACAAATTTACTGCAGATTCGCTGCAATTGCTAACTAATAACTTGTGTTACACGTATTCAAGGTGCACTAGATCTGTTTCCATAGTGCCTCCTGCTTATTATGCGCATTTAGTCGCTTTTAGAGCACGGTATTATATCGAGGGGGAGTTTTCCGAAAGTGGGTCAACAAGCGAAAGCAGGAGTGGGGAGGTCAGGCCTCTCCCTGTCGTCAAGGACAACGTGAAAGAAGTGATGTTCTATTGCTGA 2985 42.01 MPRRGGSSRGGGSRGGGRRGAYSHRDQPSSAMNQSADERTGRGSDAGISVDSRGASSGVSGSSVGKTSGSGGGSDAKRPSQSVVVTASKESPTVPTLRSEPSSSRPQTSTDAAEMNLLIRKVEKATLQPDPPPPVSSKALSVPRRPGYGTVGKKIVVRANHFLVEVSDKDIHHYDVSIKPEILSKKVCRSVIKRLEDIYKESHLNKRMLAYDGSKSLYTAGALPFQSKELVVELPDNRSETSASTSTRRERKFTVTINYASKPDIHHLQQFIRGRQLDVPQETIQMLDVVLRASPSADYTVVGRSFFSLQLGPKGELGDGVEYWKGYYQSLRPTQMGLSLNIDISARSFYEQILVTDFVAKYFNLRDFSRPLSDQERLKIKKALRGIKVRITYSEHARTYKVTGITAQSISQLGFPLGDDTKKTSILQYFQDRYGIGLKYLTLPALQAGNDPSNPIYLPMELCEIVGGQRYTKKLNERQVTALLRATCQRPPQREDGIKKIVQNNKYGGDKLVNKEFEIKVREDLTSVDARVLPPPMIKYHDTGKETRVDPKMGQWNMINKKMVNGGRVELWTCVNFSSRINRNLPFDFCQQLIEMCNSKGMDFNPNPLIPITFAQSSQIERTLGEVHKKSQERLKNLKRDGDRLQLLIIILPDFRKIKRVCETELGIVSQCCQPKQASKMSIQYFENVALKINVKVGGRNSVLNDAILRKIPFVSDMPTIVFGADVTHPAPGEDSSPSIAAVVASMDWPEVTKYKGLISSQSHREEIIQDLYKLVQDPQRGLVHGGMIRELLVSFYKSTGLKPHRILFYRDGVSEGQFNQVLLYEMDAIRKACAALQEGYQPPVTFIVVQKRHHTRLFPADNRNLDRSGNILPGTVVDTKICHPTEFDFYLNSHAGIQGTSRPAHYHVLYDENKFTADSLQLLTNNLCYTYSRCTRSVSIVPPAYYAHLVAFRARYYIEGEFSESGSTSESRSGEVRPLPVVKDNVKEVMFYC 994
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 6239325 6244718 + Bpe004183.1 Bpe11g00840 110985
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g00840 994 Coils Coil 628 648 - -
Bpe11g00840 994 Pfam Argonaute linker 2 domain 493 540 IPR032472 -
Bpe11g00840 994 MobiDBLite consensus disorder prediction 1 112 - -
Bpe11g00840 994 SMART PAZ_2_a_3 357 487 IPR003100 GO:0005515
Bpe11g00840 994 SUPERFAMILY Ribonuclease H-like 635 960 IPR012337 -
Bpe11g00840 994 ProSiteProfiles PAZ domain profile. 353 467 IPR003100 GO:0005515
Bpe11g00840 994 Pfam Piwi domain 653 959 IPR003165 GO:0003676
Bpe11g00840 994 CDD Piwi_ago-like 515 959 IPR045246 -
Bpe11g00840 994 MobiDBLite consensus disorder prediction 26 40 - -
Bpe11g00840 994 SUPERFAMILY PAZ domain 154 505 IPR036085 GO:0005515
Bpe11g00840 994 ProSiteProfiles Piwi domain profile. 658 960 IPR003165 GO:0003676
Bpe11g00840 994 Gene3D - 532 706 - -
Bpe11g00840 994 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 67 975 - -
Bpe11g00840 994 SMART Piwi_a_2 647 960 IPR003165 GO:0003676
Bpe11g00840 994 Pfam PAZ domain 377 483 IPR003100 GO:0005515
Bpe11g00840 994 PANTHER PROTEIN ARGONAUTE 1D 67 975 - -
Bpe11g00840 994 MobiDBLite consensus disorder prediction 124 143 - -
Bpe11g00840 994 Pfam Argonaute linker 1 domain 302 351 IPR014811 -
Bpe11g00840 994 Gene3D paz domain 347 471 - -
Bpe11g00840 994 MobiDBLite consensus disorder prediction 50 112 - -
Bpe11g00840 994 SMART DUF1785_2 300 352 IPR014811 -
Bpe11g00840 994 CDD PAZ_argonaute_like 355 466 - -
Bpe11g00840 994 Pfam N-terminal domain of argonaute 153 291 IPR032474 -
Bpe11g00840 994 Pfam Mid domain of argonaute 551 629 IPR032473 -
Bpe11g00840 994 Gene3D - 712 994 IPR036397 GO:0003676
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe11g00840 Bpe-Chr11:6239325 Bpe14g01214 Bpe-Chr14:9068277 0 dispersed
Bpe11g00840 Bpe-Chr11:6239325 Bpe12g00636 Bpe-Chr12:11980127 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g00840 K11593 - pop:7472995 1276.15