Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g00847 ATGGAGTTGAACGATGATACTGAAACGCAGGGAGATGAAAGCTCGGACAACGGAAGAGAAAAGCCGATGGTCGTAGTAATAATGGGTCCCACCGGTTCAGGGAAGTCCCGCCTCGCTATAGATTTAGCTTCCCACTTCCCTGTCGAGCTCATCAACGCCGACTCCATGCAGGTCTATAGAGGTCTCGACGTTCTCACCAACAAGGTTCCCGAATCTGACCAAAAGGGAGTCCCTCATCATTTACTGGGAACAGTTGATACAAACGTAGAGTTCACAGCAAAAGAGTTTCGTGATTGTGCAATTCCTATCATTGAAGACATATTATCTCGCAACTGCCTGCCAGTCATAGTTGGGGGTACAAATTACTATATCCAGGCTCTTGTTAGCCCATATCTTCTAGATGATTCAGCAGAAGATGTTGATGGAACCCGCTCAAATGATCTAGAAGACGAAGAGCTAGATAAAGATTTGGATTTTGGACGAGACAGTTTCAGCTATAGTTATAATGATCTTAAAGAGATTGATCCAGTCGCTGCAAATAGGATCCATCCCAATGACAAAAGAAAAATTCGTCAACACCTATGTTTGTATTACCGTTATGGTGTTCTTCCCAGCAAAATATTTCAGGGAAAGGCTGCGGAGAATTGGGGTCGACCAGAGTGTTTCCGATACAACTGTTGTTTTATAAGTATGGAAGTATCTCACTCTGTACTGGACCAACATGTGAATCAGAGAGTGGATGACATGGTAGCTACTGGATTACTTAATGAAGTCTTTGATATTTATAATCTTAATGCGGATTATACTCGAGGTTTGCTGCAAGCCATCGGTGTCCGAGAATTCGAAGAGTTTTTGAAACATTATATATTTGAAGGTAGACGCAATGAAGAGACTGAATTAACCGATGAGTGGATGAACGGGAGGCATAAATTTTTGAAAGAGAAAATGAGAGTACTCCTTACTTCATCGGTTGACAACTATTCTCAATTACTCTTAAAAGATGCTATAGCCAAAGTAAAGTTGAACACCAGAAGACTTGCTCGTCGGCAGAGGAGGAGACTAAATAGACTACAGACATTATTTGGGTGGAACATACATTACATTGATGCCACAGAATCAATAGCATGCATATCAGATCATTCGTGGACTACGCAAGTTCTTGAGCCTGCCATTGAAATAGTCAGATCTTTCCTCGATAAGGACACCCAATCAGTGACTGACCTGGGGGTCCCAGATACTTCTGATGTGGAAACTATCCAACGAGACTTGTGGACTCAGTATACGTGCAAGGCTTGTGGAAACAGAGTACTTAGAGGAAGACATGAGTGGGAAGAACATATACAAGGCCGACGGCATAGAAAACGTGTATCTCGGCTTAGAAAGACTAATGGTTTACTCTTGTCAGACCTTCAACTGCTGTAA 1422 42.41 MELNDDTETQGDESSDNGREKPMVVVIMGPTGSGKSRLAIDLASHFPVELINADSMQVYRGLDVLTNKVPESDQKGVPHHLLGTVDTNVEFTAKEFRDCAIPIIEDILSRNCLPVIVGGTNYYIQALVSPYLLDDSAEDVDGTRSNDLEDEELDKDLDFGRDSFSYSYNDLKEIDPVAANRIHPNDKRKIRQHLCLYYRYGVLPSKIFQGKAAENWGRPECFRYNCCFISMEVSHSVLDQHVNQRVDDMVATGLLNEVFDIYNLNADYTRGLLQAIGVREFEEFLKHYIFEGRRNEETELTDEWMNGRHKFLKEKMRVLLTSSVDNYSQLLLKDAIAKVKLNTRRLARRQRRRLNRLQTLFGWNIHYIDATESIACISDHSWTTQVLEPAIEIVRSFLDKDTQSVTDLGVPDTSDVETIQRDLWTQYTCKACGNRVLRGRHEWEEHIQGRRHRKRVSRLRKTNGLLLSDLQLL 473
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 6291391 6295898 - Bpe004190.2 Bpe11g00847 110992
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g00847 473 Hamap tRNA dimethylallyltransferase [miaA]. 24 399 IPR018022 GO:0008033
Bpe11g00847 473 Pfam IPP transferase 57 352 - -
Bpe11g00847 473 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 20 403 IPR039657 -
Bpe11g00847 473 SMART ZnF_U1_5 424 459 IPR003604 GO:0003676|GO:0008270
Bpe11g00847 473 Gene3D - 22 420 IPR027417 -
Bpe11g00847 473 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 20 403 - -
Bpe11g00847 473 MobiDBLite consensus disorder prediction 1 22 - -
Bpe11g00847 473 Gene3D Classic Zinc Finger 422 464 - -
Bpe11g00847 473 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 25 131 IPR027417 -
Bpe11g00847 473 TIGRFAM miaA: tRNA dimethylallyltransferase 24 319 IPR018022 GO:0008033
Bpe11g00847 473 Gene3D - 144 211 - -
Bpe11g00847 473 SUPERFAMILY beta-beta-alpha zinc fingers 409 461 IPR036236 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe11g00458 Bpe-Chr11:3564642 Bpe11g00847 Bpe-Chr11:6291391 2.49E-20 dispersed
Bpe11g00847 Bpe-Chr11:6291391 Bpe14g01324 Bpe-Chr14:10268861 2.19E-20 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g00847 K00791 - qsu:111983693 600.512