Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe11g00850 | ATGGAGCCGTGGCTCGACGACCTCGCCGATGACCTGCATAGCATTAGTTTCACATCCACAAACACCAATCGCAGCACCAGTTCGGGCTCCGAAACCACTCTCACAGCTTCTTCTTCAGTTCACCTCGGTCCTCTGGCCTCTCTCTCGAACAAACCACACGCACCCTCCTCCGATCCTTGCTGGTCCGCCATTAATCGGATCCACTCCGAATGCCCCACCCGACGCATCGCTCTCTCCGACCTCAAGTTCTCCTACCGTCTTGGTTCCGGTGACATCGGCTCCGTCTACTTAACAGAACTGAAGAGCTCGGGAGCGGAAGGGTGCGTTTTCGCTGCTAAGGTCATGGATAAGAAGGAATTAATGGGCCGGAGCAAAGAAGGACGAGCGAGGACCGAGATGGAAATACTGGAAATGTTGGACCACCCGTTTCTTCCCACGCTCTACGCGAGTATCGACTCGTCTCGGTGGCTCTGCCTCTTGACCGAGTTCTGCCCCGGTGGGGACCTTCACGTTCTCCGGCAACGCCAACTTGACAAACGCTTCGACGAGCCTACTGTCAGATATTTGGATCAGCCGGCTAGCCGGCCTTTCCATCTCAATTATGTTAATTTCTCTTTTAATGTTTGTCCCTTAAACCATCAAAGCCGACTAACCATCTCTTCAATTCTCATTTACAGGCTAGAACAATGGGTTTTATGTATTAAATTCATGGGTAAAGATAGAACGGGAATGGTATCAAGAATCTGGTGCAATTTATACCAAAATTTTCATGGGTTTTATGCGTCAGAGGTATTGGTTGCTTTAGAATACCTCCATATGAAGGGGATAGTTTATCGAGATCTGAAGCCGGAAAACGTGCTGGTTCGATCGGACGGTCATATAATGCTCACGGATTTCGATCTCTCTTTAAAATGTGAAGATTCTACCTCAACACCTCAGGTTATTACCAACCAAAACTCGATAAATTCAGTCCCACAGAAAGGCTACTTTGCTGATCATCATCCGTTTGCATCATCTTCATGCATCATTCCAAACTGCATGTTACCGGCTGTATCTTGCTTCCACCCAAAAGGCAAATGGAAGAAGAAATCGGGCAATCGTAGTGGACCTGAGTTTTTCGCTGAGCCTGTCGATGTCCGTTCAATGTCTTTCGTCGGGACCCATGAGTATTTGGCTCCGGAGATCGTCTCTGGCGAAGGCCATGGCAGTGCAGTAGACTGGTGGACATTAGGAATCTTCATGTTTGAACTCTTCTATGGGGTGACTCCTTTTAAAGGGGTAGACAATGAGCTGACCTTGGCCAACATCGTGGCTCGAGCCCTTGAGTTTCCGAAAGAGCCCACCATTCCGGCCTTGGCCAAGGACCTCATTCTGCAGCTACTTGTTAAAGACCCTGCTTACCGGCTGGGGTCCACGATGGGTTCCTCGCGGATCAAGCACCATCCATTTTTCGAAGGGGTCAATTGGGCATTGCTGAGATGTACGTCACCGCCGTTCATTCCAGCGGCGTATCCTAGAGAAGTTGTATCACACGAAAGTTGCCCCGAGACTCCAATGGATTGTTATTAA | 1569 | 49.33 | MEPWLDDLADDLHSISFTSTNTNRSTSSGSETTLTASSSVHLGPLASLSNKPHAPSSDPCWSAINRIHSECPTRRIALSDLKFSYRLGSGDIGSVYLTELKSSGAEGCVFAAKVMDKKELMGRSKEGRARTEMEILEMLDHPFLPTLYASIDSSRWLCLLTEFCPGGDLHVLRQRQLDKRFDEPTVRYLDQPASRPFHLNYVNFSFNVCPLNHQSRLTISSILIYRLEQWVLCIKFMGKDRTGMVSRIWCNLYQNFHGFYASEVLVALEYLHMKGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCEDSTSTPQVITNQNSINSVPQKGYFADHHPFASSSCIIPNCMLPAVSCFHPKGKWKKKSGNRSGPEFFAEPVDVRSMSFVGTHEYLAPEIVSGEGHGSAVDWWTLGIFMFELFYGVTPFKGVDNELTLANIVARALEFPKEPTIPALAKDLILQLLVKDPAYRLGSTMGSSRIKHHPFFEGVNWALLRCTSPPFIPAAYPREVVSHESCPETPMDCY | 522 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 6302202 | 6305004 | + | Bpe004193.1 | Bpe11g00850 | 110995 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe11g00850 | 522 | Gene3D | Transferase(Phosphotransferase) domain 1 | 258 | 308 | - | - | |
Bpe11g00850 | 522 | Pfam | Protein tyrosine and serine/threonine kinase | 81 | 309 | IPR001245 | GO:0004672|GO:0006468 | |
Bpe11g00850 | 522 | Gene3D | Transferase(Phosphotransferase) domain 1 | 381 | 502 | - | - | |
Bpe11g00850 | 522 | Gene3D | Phosphorylase Kinase; domain 1 | 46 | 220 | - | - | |
Bpe11g00850 | 522 | SUPERFAMILY | Protein kinase-like (PK-like) | 54 | 509 | IPR011009 | - | |
Bpe11g00850 | 522 | PANTHER | FLIPPASE KINASE 1-RELATED | 258 | 522 | - | - | |
Bpe11g00850 | 522 | PANTHER | FLIPPASE KINASE 1-RELATED | 1 | 188 | - | - | |
Bpe11g00850 | 522 | Pfam | Protein kinase domain | 381 | 484 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bpe11g00850 | 522 | PANTHER | OS11G0150700 PROTEIN | 258 | 522 | - | - | |
Bpe11g00850 | 522 | PANTHER | OS11G0150700 PROTEIN | 1 | 188 | - | - | |
Bpe11g00850 | 522 | ProSiteProfiles | Protein kinase domain profile. | 81 | 484 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bpe11g00850 | 522 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 276 | 288 | IPR008271 | GO:0004672|GO:0006468 | |
Bpe11g00850 | 522 | SMART | serkin_6 | 81 | 484 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bpe08g01280 | Bpe11g00850 | CCT | |
Bpe08g01280 | Bpe11g00850 | ECH |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe11g00850 | Bpe-Chr11:6302202 | Bpe03g00751 | Bpe-Chr3:27571401 | 3.91E-34 | dispersed | |
Bpe11g00850 | Bpe-Chr11:6302202 | Bpe02g00756 | Bpe-Chr2:5321299 | 5.72E-125 | wgd | |
Bpe11g00850 | Bpe-Chr11:6302202 | Bpe08g01280 | Bpe-Chr8:14191260 | 2.14E-110 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
63575 | PF07714 | PK_Tyr_Ser-Thr | 3.30E-17 | CL0016 | Bpe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe11g00850 | K08286 | - | rcu:8269639 | 458.759 |