Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g00850 ATGGAGCCGTGGCTCGACGACCTCGCCGATGACCTGCATAGCATTAGTTTCACATCCACAAACACCAATCGCAGCACCAGTTCGGGCTCCGAAACCACTCTCACAGCTTCTTCTTCAGTTCACCTCGGTCCTCTGGCCTCTCTCTCGAACAAACCACACGCACCCTCCTCCGATCCTTGCTGGTCCGCCATTAATCGGATCCACTCCGAATGCCCCACCCGACGCATCGCTCTCTCCGACCTCAAGTTCTCCTACCGTCTTGGTTCCGGTGACATCGGCTCCGTCTACTTAACAGAACTGAAGAGCTCGGGAGCGGAAGGGTGCGTTTTCGCTGCTAAGGTCATGGATAAGAAGGAATTAATGGGCCGGAGCAAAGAAGGACGAGCGAGGACCGAGATGGAAATACTGGAAATGTTGGACCACCCGTTTCTTCCCACGCTCTACGCGAGTATCGACTCGTCTCGGTGGCTCTGCCTCTTGACCGAGTTCTGCCCCGGTGGGGACCTTCACGTTCTCCGGCAACGCCAACTTGACAAACGCTTCGACGAGCCTACTGTCAGATATTTGGATCAGCCGGCTAGCCGGCCTTTCCATCTCAATTATGTTAATTTCTCTTTTAATGTTTGTCCCTTAAACCATCAAAGCCGACTAACCATCTCTTCAATTCTCATTTACAGGCTAGAACAATGGGTTTTATGTATTAAATTCATGGGTAAAGATAGAACGGGAATGGTATCAAGAATCTGGTGCAATTTATACCAAAATTTTCATGGGTTTTATGCGTCAGAGGTATTGGTTGCTTTAGAATACCTCCATATGAAGGGGATAGTTTATCGAGATCTGAAGCCGGAAAACGTGCTGGTTCGATCGGACGGTCATATAATGCTCACGGATTTCGATCTCTCTTTAAAATGTGAAGATTCTACCTCAACACCTCAGGTTATTACCAACCAAAACTCGATAAATTCAGTCCCACAGAAAGGCTACTTTGCTGATCATCATCCGTTTGCATCATCTTCATGCATCATTCCAAACTGCATGTTACCGGCTGTATCTTGCTTCCACCCAAAAGGCAAATGGAAGAAGAAATCGGGCAATCGTAGTGGACCTGAGTTTTTCGCTGAGCCTGTCGATGTCCGTTCAATGTCTTTCGTCGGGACCCATGAGTATTTGGCTCCGGAGATCGTCTCTGGCGAAGGCCATGGCAGTGCAGTAGACTGGTGGACATTAGGAATCTTCATGTTTGAACTCTTCTATGGGGTGACTCCTTTTAAAGGGGTAGACAATGAGCTGACCTTGGCCAACATCGTGGCTCGAGCCCTTGAGTTTCCGAAAGAGCCCACCATTCCGGCCTTGGCCAAGGACCTCATTCTGCAGCTACTTGTTAAAGACCCTGCTTACCGGCTGGGGTCCACGATGGGTTCCTCGCGGATCAAGCACCATCCATTTTTCGAAGGGGTCAATTGGGCATTGCTGAGATGTACGTCACCGCCGTTCATTCCAGCGGCGTATCCTAGAGAAGTTGTATCACACGAAAGTTGCCCCGAGACTCCAATGGATTGTTATTAA 1569 49.33 MEPWLDDLADDLHSISFTSTNTNRSTSSGSETTLTASSSVHLGPLASLSNKPHAPSSDPCWSAINRIHSECPTRRIALSDLKFSYRLGSGDIGSVYLTELKSSGAEGCVFAAKVMDKKELMGRSKEGRARTEMEILEMLDHPFLPTLYASIDSSRWLCLLTEFCPGGDLHVLRQRQLDKRFDEPTVRYLDQPASRPFHLNYVNFSFNVCPLNHQSRLTISSILIYRLEQWVLCIKFMGKDRTGMVSRIWCNLYQNFHGFYASEVLVALEYLHMKGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCEDSTSTPQVITNQNSINSVPQKGYFADHHPFASSSCIIPNCMLPAVSCFHPKGKWKKKSGNRSGPEFFAEPVDVRSMSFVGTHEYLAPEIVSGEGHGSAVDWWTLGIFMFELFYGVTPFKGVDNELTLANIVARALEFPKEPTIPALAKDLILQLLVKDPAYRLGSTMGSSRIKHHPFFEGVNWALLRCTSPPFIPAAYPREVVSHESCPETPMDCY 522
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 6302202 6305004 + Bpe004193.1 Bpe11g00850 110995
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g00850 522 Gene3D Transferase(Phosphotransferase) domain 1 258 308 - -
Bpe11g00850 522 Pfam Protein tyrosine and serine/threonine kinase 81 309 IPR001245 GO:0004672|GO:0006468
Bpe11g00850 522 Gene3D Transferase(Phosphotransferase) domain 1 381 502 - -
Bpe11g00850 522 Gene3D Phosphorylase Kinase; domain 1 46 220 - -
Bpe11g00850 522 SUPERFAMILY Protein kinase-like (PK-like) 54 509 IPR011009 -
Bpe11g00850 522 PANTHER FLIPPASE KINASE 1-RELATED 258 522 - -
Bpe11g00850 522 PANTHER FLIPPASE KINASE 1-RELATED 1 188 - -
Bpe11g00850 522 Pfam Protein kinase domain 381 484 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe11g00850 522 PANTHER OS11G0150700 PROTEIN 258 522 - -
Bpe11g00850 522 PANTHER OS11G0150700 PROTEIN 1 188 - -
Bpe11g00850 522 ProSiteProfiles Protein kinase domain profile. 81 484 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe11g00850 522 ProSitePatterns Serine/Threonine protein kinases active-site signature. 276 288 IPR008271 GO:0004672|GO:0006468
Bpe11g00850 522 SMART serkin_6 81 484 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe08g01280 Bpe11g00850 CCT
Bpe08g01280 Bpe11g00850 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe11g00850 Bpe-Chr11:6302202 Bpe03g00751 Bpe-Chr3:27571401 3.91E-34 dispersed
Bpe11g00850 Bpe-Chr11:6302202 Bpe02g00756 Bpe-Chr2:5321299 5.72E-125 wgd
Bpe11g00850 Bpe-Chr11:6302202 Bpe08g01280 Bpe-Chr8:14191260 2.14E-110 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63575 PF07714 PK_Tyr_Ser-Thr 3.30E-17 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g00850 K08286 - rcu:8269639 458.759