Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g00859 ATGGCGGCCGAAAGAGTTGCTGGGACTGGTTTAGTAGAATCTGGACCTTCCGATCACCATTTTCCCCGTGCTGTTTTTTACGAAGTTGATGATACTTGCACGAGTTTCATTAATCAAAGGTCAAGATTTGATTTTGGAGAGCTGGAAGAAGCAATTGTTCTGCAAGGAGTTGGGTTGAGAAATGACGAAGCCAGAACATCTCTTTTCACCGGAAAGCCAGCCACTTTGGAAATTTTCCCTTCCTGGCCTATGATATTCCAACCAAGCCATGTAGCAGGGAGTTCAAAGTCAGGAGGGGAGAGCAGTGATTTGGGATCAGCTATGAACAAGCTCACTGCAGGCAGAGCTGAGGGCTACTCAGAACAAGAATCTCCGATGAGTAAAAAGTCGTCTTCCTCTTCCGATAATCAGGGTTTTGATCAGAATGTTGTTGATCTGCGATTTCAATGGCCAGAAAAGAAGAAAGGAACCGGTTCAAAATCAGAGAAGCTACTCGATGCCAAGACGTCCAGACGTTTGGCTCAAAACAGAGCAGCAGCAAAAAAGAGTCGTCTCAGAAAAAAGGCTTACATACAGCAGCTGGAAGCAAGTAGAATGAAGCTTTCTCAGATTGAACAAGACCTCCGATCTCACTCTCAGGGATTGTTCTCTGCTTCTTCTGATGCTCGCATAAGCTCCGGAGGTGTAGTTTTCGACATGGAATATACGAGATGGCTAGAGGATGATCGGAGGCAGATGACTCAGCTAAGATCGGGTTTGGAGGTGCACTTATCGGACCATGATCTCCAATCAACAGTAGATGAGTACATTTCTCATTATGATGAAATTTTCCGGCTAAAAGGGGTGGTAGCCAAATCCGACGTCTTCCATCTGATCACCGGAATGTGGATAACTCCGGTCGAGAGATATTTTCTCTGGATGGGTGGCTTTAGACCCTCTGAACTCATAAAGATTTTAATATCACAACTAGACCCACTGAGCGAACAGCAAGCAATGGGAATATATAAGATGCAAGATTCTACACAACAGGCAGAGGACGCTCTATCCCAAGGCCAAGAACAACTCCAGCAATCTCTGCTAGACACCATAGCCGGTGGGCCGATCATCCACAGCATGAACCAGATGTTGATGGCCGTCGGCATGCTTTCCAATCTCGAAGGTTTAGTTCGACAGGCTGATATTTTGAGGCAGCAAACACTTCATCAATTGTGTCGAATATTAACAACACGACAAGCCGCACAGTGTTTTGTTGTAATCGGAGAATATTACAGCAGGCTAAGAGCCCTCAGCTCTATATGGGCGACTCGGCCTCGGAGAGCCATTGATGAATGA 1332 45.87 MAAERVAGTGLVESGPSDHHFPRAVFYEVDDTCTSFINQRSRFDFGELEEAIVLQGVGLRNDEARTSLFTGKPATLEIFPSWPMIFQPSHVAGSSKSGGESSDLGSAMNKLTAGRAEGYSEQESPMSKKSSSSSDNQGFDQNVVDLRFQWPEKKKGTGSKSEKLLDAKTSRRLAQNRAAAKKSRLRKKAYIQQLEASRMKLSQIEQDLRSHSQGLFSASSDARISSGGVVFDMEYTRWLEDDRRQMTQLRSGLEVHLSDHDLQSTVDEYISHYDEIFRLKGVVAKSDVFHLITGMWITPVERYFLWMGGFRPSELIKILISQLDPLSEQQAMGIYKMQDSTQQAEDALSQGQEQLQQSLLDTIAGGPIIHSMNQMLMAVGMLSNLEGLVRQADILRQQTLHQLCRILTTRQAAQCFVVIGEYYSRLRALSSIWATRPRRAIDE 443
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 6359184 6361976 - Bpe004201.1 Bpe11g00859 111004
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g00859 443 PANTHER TRANSCRIPTION FACTOR TGA9 64 439 - -
Bpe11g00859 443 MobiDBLite consensus disorder prediction 115 138 - -
Bpe11g00859 443 Gene3D - 167 218 - -
Bpe11g00859 443 ProSiteProfiles DOG1 domain profile. 228 436 IPR025422 GO:0006351|GO:0043565
Bpe11g00859 443 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 171 186 IPR004827 GO:0003700|GO:0006355
Bpe11g00859 443 Pfam bZIP transcription factor 167 215 IPR004827 GO:0003700|GO:0006355
Bpe11g00859 443 Coils Coil 187 207 - -
Bpe11g00859 443 PANTHER TRANSCRIPTION FACTOR TGA9 64 439 - -
Bpe11g00859 443 SMART brlzneu 162 221 IPR004827 GO:0003700|GO:0006355
Bpe11g00859 443 SUPERFAMILY Leucine zipper domain 168 210 IPR046347 GO:0003700|GO:0006355
Bpe11g00859 443 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 166 215 IPR004827 GO:0003700|GO:0006355
Bpe11g00859 443 MobiDBLite consensus disorder prediction 123 138 - -
Bpe11g00859 443 Pfam Seed dormancy control 245 320 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe04g01381 Bpe-Chr4:20448925 Bpe11g00859 Bpe-Chr11:6359184 1.38E-110 dispersed
Bpe11g00859 Bpe-Chr11:6359184 Bpe15g00992 Bpe-Chr15:19459390 5.20E-105 dispersed
Bpe01g00249 Bpe-Chr1:1510039 Bpe11g00859 Bpe-Chr11:6359184 4.40E-20 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22066 PF14144 DOG1 7.10E-29 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g00859 K14431 - vvi:100258619 527.324