Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g00883 ATGGGTGTCTCAGGGAAATGGATAAAAGCACTGGTTGGTTTTAAAAAATCAGAAAAGTCGCGATCTTCAGAAAAAGATCACAATAAGACACCTGGGAGTAAGATCCGACATCATAGAAAGCACTCTCTCGAGTTTGATGCGGATAATCTTCAGTCCGAAATGGATCTAGATAGCACCTCATTAGTTGAGGATGCTAATGGTCATACTGATCGATATCCTGGTGGTTTGCCTTCAAATTCGCTTCAGTTACTTGGCATTTCACAGAGTCCTAAGAATGAAAGAGAAGAGTGGGCTGCTACACGAATCCAAACAACCTTTCGAGGATTTCTGGCCAGGAGAGCTCTCCGAGCTTTGAAAGGAGTAGTGAGACTTCAAGCTCTTGTCAGGGGTCATGCCGTTAGAAAGCAAGCTGCAATAACACTTCGATTTATGCAAGCTTTAGTGAGAGTTCAGGCTCAGGTCAGAGCAAGGCACGTTCGTCTCGCATTAGAAAGGGAAACATCTCAACAAAAGCTTCAACAACAACTTGAAAATCAGGGTCGTGTCAGAGAAATAGAGGAAGGGTGGTGTGACAGTGTAGGATCTGTTGAAGAAATTCAAGCCAAGTTGTTAAAGAGGCAGGAGGCTGCAGCCAAGCGTGAGAGAGCCATGGCATATGCTCTGGCTCATCAGTGGCAAGCAGGATCAAGACAGCAGACTGCTCTATCAGGGTTTGAACCAGATAAGAGCAGCTGGGGTTGGAATTGGTTGGAAAGATGGATGGCTGTCCGGCCTTGGGAGAATCGTTTTCTTGACATTAATCTCCGAGATGGAGTGATGATACGAGAGGATGAATCTGCCGAGGCTAGACATAGCAGTGGATCTCAGTCAAAAGCTAGTGGAAAGAAGCCTCATTTTGCAGTTGTCTCGAACCAGAAAACCGCCCCTTCTAATTCCCAGGGCTCTAATTCTTTTCCCAGTAAATCCGAAGGCCAGCTAGAGTCAATGTGGCCCCAGAAATCAAAGTCTAAGCATTCTTATGAAAAGACAGCAGAAGAAGTCAAAAAAGCAGTAGTTGGATCAAGATCCCTCAGCAATCCGAAAGAGAGATCGCCTCCATTAGATAAACCTGCAGAAAAGCGGCTATCTCTGCCTAATATCAGAACTTCTAGCTCTGTTTCAGCAAGGAATTCCAGCCGACTAGGAGGAAAATCGAGCTCCGATTTCTCTTTAGGCCGGTCAAGTCTAAACTCGACAGAAAAGATGAAGGAAAATGGGGTAAAATCCTTCTCACCAGGTAATGCCTAA 1287 45.22 MGVSGKWIKALVGFKKSEKSRSSEKDHNKTPGSKIRHHRKHSLEFDADNLQSEMDLDSTSLVEDANGHTDRYPGGLPSNSLQLLGISQSPKNEREEWAATRIQTTFRGFLARRALRALKGVVRLQALVRGHAVRKQAAITLRFMQALVRVQAQVRARHVRLALERETSQQKLQQQLENQGRVREIEEGWCDSVGSVEEIQAKLLKRQEAAAKRERAMAYALAHQWQAGSRQQTALSGFEPDKSSWGWNWLERWMAVRPWENRFLDINLRDGVMIREDESAEARHSSGSQSKASGKKPHFAVVSNQKTAPSNSQGSNSFPSKSEGQLESMWPQKSKSKHSYEKTAEEVKKAVVGSRSLSNPKERSPPLDKPAEKRLSLPNIRTSSSVSARNSSRLGGKSSSDFSLGRSSLNSTEKMKENGVKSFSPGNA 428
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 6512334 6516836 - Bpe004224.1 Bpe11g00883 111028
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g00883 428 PANTHER IQ-DOMAIN 5-RELATED 2 391 - -
Bpe11g00883 428 PANTHER IQ-DOMAIN 5-RELATED 2 391 - -
Bpe11g00883 428 ProSiteProfiles IQ motif profile. 95 123 IPR000048 GO:0005515
Bpe11g00883 428 MobiDBLite consensus disorder prediction 15 41 - -
Bpe11g00883 428 MobiDBLite consensus disorder prediction 15 31 - -
Bpe11g00883 428 Pfam IQ calmodulin-binding motif 119 136 IPR000048 GO:0005515
Bpe11g00883 428 Pfam IQ calmodulin-binding motif 97 116 IPR000048 GO:0005515
Bpe11g00883 428 MobiDBLite consensus disorder prediction 377 428 - -
Bpe11g00883 428 MobiDBLite consensus disorder prediction 279 428 - -
Bpe11g00883 428 MobiDBLite consensus disorder prediction 303 333 - -
Bpe11g00883 428 Gene3D - 92 143 - -
Bpe11g00883 428 ProSiteProfiles IQ motif profile. 119 146 IPR000048 GO:0005515
Bpe11g00883 428 MobiDBLite consensus disorder prediction 334 349 - -
Bpe11g00883 428 SMART iq_5 94 116 IPR000048 GO:0005515
Bpe11g00883 428 SMART iq_5 117 138 IPR000048 GO:0005515
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe02g00361 Bpe-Chr2:2360978 Bpe11g00883 Bpe-Chr11:6512334 6.02E-20 dispersed
Bpe03g00191 Bpe-Chr3:2304893 Bpe11g00883 Bpe-Chr11:6512334 1.11E-37 dispersed
Bpe03g00849 Bpe-Chr3:28308222 Bpe11g00883 Bpe-Chr11:6512334 1.16E-43 dispersed
Bpe04g01873 Bpe-Chr4:23845940 Bpe11g00883 Bpe-Chr11:6512334 5.82E-46 dispersed
Bpe06g00782 Bpe-Chr6:18055828 Bpe11g00883 Bpe-Chr11:6512334 8.76E-27 dispersed
Bpe11g00883 Bpe-Chr11:6512334 Bpe14g00783 Bpe-Chr14:5953139 6.07E-30 dispersed
Bpe13g00809 Bpe-Chr13:14430779 Bpe11g00883 Bpe-Chr11:6512334 7.36E-20 dispersed
Bpe15g00491 Bpe-Chr15:16173800 Bpe11g00883 Bpe-Chr11:6512334 2.35E-18 dispersed
Bpe11g00883 Bpe-Chr11:6512334 Bpe02g00495 Bpe-Chr2:3201970 4.06E-55 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g00883 - - pvy:116125522 463.381