Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g00884 ATGACAGATAATCATGAAACAGACAAGAACATTGAGATATGGAAGATCAAGAAATTGATTAAGGCTTTGGAATCTGCACGAGGTAATGGTACCAGCATGATATCCCTTATTATGCCTCCCCGAGATCAAATATCACGAGTCACGAAGATGCTCGGCGATGAATATGGGACTGCTTCAAACATCAAAAGCAGAGTTAATCGACAATCTGTTTTGGGTGCCATTACTTCTGCTCAACAGAGGCTGAAACTTTATAACAAGGTTCCTCCCAATGGGTTAGTTCTTTATACTGGAACAATTGTCACGGACGATGGAAAAGAAAAGAAGGTTACCATCGACTTTGAGCCCTTCAAGCCTATAAATGCATCTTTATATCTCTGTGATAACAAGTTTCACACGGAAGCTTTGAATGAACTTTTAGAATCTGATGATAAGTTTGGTTTCATAGTCATGGATGGGAATGGCACACTGTTTGGGACATTAAGTGGTAACACACGTGAGGTCCTTCATAAATTTACAGTTGATTTGCCGAAGAAGCACGGAAGAGGTGGTCAGTCAGCATTAAGGTTTGCTCGTCTTCGAATGGAAAAGCGGCATAACTATGTAAGAAAAACTGCTGAGCTTGCCACTCAGTTCTACGTCAATCCAGCTACCAGTCAGCCAAATGTTGCTGGGCTAATATTGGCTGGTTCGGCCGACTTCAAGACTGAACTGAGCCAATCCGATATGTTTGACCCTCGTCTACAAGCGAAAATATTGAATGTGGTTGATGTTTCATATGGGGGTGAAAATGGTTTCAATCAAGCTATCGAACTGTCCTCGGAAATTCTGTCAAACGTCAAGTTCATACAGGAGAAACGTTTGATCGGAAAGTACTTTGAAGAGATCAGTCAGGATACCGGAAAATATGTTTTTGGAGTGGATGACACTTTGAAGGCTCTAGAAATGGGTGCCATAGAGACCCTCATTGTTTGGGAAAATCTGGATATGAACAGGAATGTGCTGAAAAACAGTGCTACAGGTGAGATTGTGATAAAACACTTGAACAAGGAACAAGAAACGGATCAGAGCAACTTCCGGGATGTGGCTACCTCAGCTGAGTTGGAGGTTCAGGAGAAGACACCTCTGCTCGAGTGGTTTGCCAACGAGTACAAGAGGTTTGGATGTACACTCGAATTCGTCACCAACAAATCCCAAGAGGGTTCTCAATTTTGCCGAGGGTTTGGTGGAATTGGAGGTATGTTACGTTACCAGCTCGACATGAGATCATTTGACGAGGTATCTGATGATGGGGAACTTTACGAGGATTCAGATTAA 1314 42.54 MTDNHETDKNIEIWKIKKLIKALESARGNGTSMISLIMPPRDQISRVTKMLGDEYGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFKPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFYVNPATSQPNVAGLILAGSADFKTELSQSDMFDPRLQAKILNVVDVSYGGENGFNQAIELSSEILSNVKFIQEKRLIGKYFEEISQDTGKYVFGVDDTLKALEMGAIETLIVWENLDMNRNVLKNSATGEIVIKHLNKEQETDQSNFRDVATSAELEVQEKTPLLEWFANEYKRFGCTLEFVTNKSQEGSQFCRGFGGIGGMLRYQLDMRSFDEVSDDGELYEDSD 437
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 6519808 6521121 + Bpe004225.1 Bpe11g00884 111029
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g00884 437 Pfam eRF1 domain 2 144 277 IPR005141 -
Bpe11g00884 437 Gene3D eRF1 domain 2 136 277 IPR042226 -
Bpe11g00884 437 Gene3D eRF1 domain 1 1 135 IPR024049 -
Bpe11g00884 437 Pfam eRF1 domain 3 281 418 IPR005142 -
Bpe11g00884 437 PANTHER EUKARYOTIC PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1-3-LIKE 1 437 - -
Bpe11g00884 437 TIGRFAM aRF1/eRF1: peptide chain release factor 1, archaeal and eukaryotic forms 12 417 IPR004403 GO:0003747|GO:0006415
Bpe11g00884 437 SMART eRF1_1_2 4 140 IPR005140 -
Bpe11g00884 437 SUPERFAMILY L30e-like 278 420 IPR029064 -
Bpe11g00884 437 Pfam eRF1 domain 1 18 138 IPR005140 -
Bpe11g00884 437 Gene3D - 279 437 IPR029064 -
Bpe11g00884 437 SUPERFAMILY N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 6 140 IPR024049 -
Bpe11g00884 437 SUPERFAMILY Translational machinery components 142 276 - -
Bpe11g00884 437 PANTHER PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1 1 437 IPR004403 GO:0003747|GO:0006415
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00886 Bpe-Chr1:19326990 Bpe11g00884 Bpe-Chr11:6519808 0 dispersed
Bpe11g00884 Bpe-Chr11:6519808 Bpe08g00788 Bpe-Chr8:9746738 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g00884 K03265 - mnt:21390969 836.639