Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g00893 ATGGCAGCACAGGCTTTGGTCTCCTCCTCTCTAACATCTACGGTGGGTGCAGCCAGGCGTAGAATAGGAGGGAAACCACTGTTTCACTCAAGAAAATCAGCTTCGTTTTTCGTCAGAGCTGAAGCTACTCCTCCTGTTAAGCAAGGAACGGATCGACAGTTATGGTTTGCGTCCAAACAAAGCCTTTCGTACTTGGATGGCAGTCTACCCGGCGACTTTGGATTTGATCCGTTGGGACTCTCAGATCCAGAAGGAACCGGAGGGTTCATCGAACCAAGATGGCTTGCTTACGGAGAGATAATCAACGGACGATACGCCATGCTAGGAGCATTCGGAGCCATAGCACCCGAAATTTTCGGGAAACTCGGTCTCATCCCACAGGAAACCGCTCTTCCGTGGTTCAAAACCGGCGTGATCCCCCCGGCGGGAACTTACAACTACTGGGCGGACAACTACACGCTCTTTGTGCTGGAAATGGCGCTAATGGGATTCGCAGAGCACAGAAGATTCCAAGACTGGGCAAAACCAGGATCGATGGGAAAACAATACTTCCTCGGGTTCGAAAAGTACTTGGGAGGATCGGGAGACCCGGCGTACCCAGGAGGGCCACTGTTCAACCCTCTAGGATTTGGTAAGGACGAGAAATCGATGAAGGAGTTAAAACTGAAGGAGGTGAAGAACGGGAGACTGGCGATGTTGGCGATCTTGGGTTACTTCGTTCAGGCATTAGTGACGGGAGTCGGACCATTCCAGAACCTTCTGGATCATTTGGCTGACCCTATAAATAACAATATCTTGACCAGTCTCAAGTTCCAT 816 50.74 MAAQALVSSSLTSTVGAARRRIGGKPLFHSRKSASFFVRAEATPPVKQGTDRQLWFASKQSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGEIINGRYAMLGAFGAIAPEIFGKLGLIPQETALPWFKTGVIPPAGTYNYWADNYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGFEKYLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEVKNGRLAMLAILGYFVQALVTGVGPFQNLLDHLADPINNNILTSLKFH 272
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 6579382 6580414 - Bpe024797 Bpe11g00893 111038
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g00893 272 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 271 IPR001344 GO:0009765|GO:0016020
Bpe11g00893 272 Pfam Chlorophyll A-B binding protein 63 242 IPR022796 -
Bpe11g00893 272 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 1 271 - -
Bpe11g00893 272 SUPERFAMILY Chlorophyll a-b binding protein 51 268 - -
Bpe11g00893 272 Gene3D Chlorophyll a/b binding protein domain 53 271 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe07g00779 Bpe-Chr7:14254429 Bpe11g00893 Bpe-Chr11:6579382 3.62E-46 dispersed
Bpe11g00893 Bpe-Chr11:6579382 Bpe12g00541 Bpe-Chr12:11278473 1.38E-48 dispersed
Bpe11g00893 Bpe-Chr11:6579382 Bpe08g01246 Bpe-Chr8:13961535 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g00893 K08909 - csv:101202993 503.056