Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe11g00900 | ATGTGCCATGAAGAAGACGACGACGAAGCTTCAACAATGGCGATCCCAGATTACAAAACGAACCCGAAATTCGGAGATTTTTTACGTTCGGAAGATGCGTATTGTGCTACTCCTCCGAACAAACGTCCCCGGCACGAGAATTGCGACCCGTTCGGGAAATTCAAAGGCGTCGTTATGCAGCAAAATGGGCATTGGGGAGCACAAATTTACGCGAATCATCAGAGAATTTGGCTCGGAACGTTTAAGTCGGAGAAAGAGGCGGCGATGGCGTACGATAGTGCGGCCATAAAGCTCCGAAACGGAGTCGACTCCCACCGGAATTTCCCTTGGACCGATCACAGCATGAAGGAGCCTAGTTTTCAAAACCAATTCAGCAAAGACGACGTGCTGAAAATGATCAGAGATGGTTCTTATTCGTCAAAGTTTGATGCATTTCTGAAAGAAAAGTCTCAAACTGAAGAGATTGGATTGGGTTCGAAGCAAATAACAATGAATTTATGCGACGGCAAATGTTCAAAAATCAAACTTTTTCAGAAGGAGCTGACTCCAAGTGACGTCGGAAAGCTCAACAGGCTCGTCATCCCGAAGAAAAACGCGACGAAATATTTTCCGTTCATCCGCGAAAACGACGACAACGACGTCGAGCTAGTTTTCTACGATAAGTTGATGAAGATTTGGAAATTCAGATACTGTTATTGGAAAAGTAGCCAGAGCTTCGTGTTCACGAGGGGCTGGAATAGGTTTGTGAAGGAGAAGAAGTTGAAGGAGAAGGACATAGTATCGTTTTACTCGTGCGAAGAAGGCCAAAACAGCGAAGAAAATGGCTTCTCTTTCTGCTTGATCGACATAGTTTACAGCAAAGAAAGAGAAACCGGAGGTGAAACCTGTTTGGCTGCCGAGAAAATTTGCAGCGAGACGAAGAACGTGGGATTGGAGCTGCACTTGGGGAATTTTCTCAGATTCAAACTGGACGGGAAAGAGAAGGAAAATGTTTTTGATGGGATGTATTCGATTCCAACTCGGGTTGAAGAGAAGGGTTTTAGGCTATTTGGAGTGCAAATCACCCGATTTAATACTTAG | 1080 | 44.81 | MCHEEDDDEASTMAIPDYKTNPKFGDFLRSEDAYCATPPNKRPRHENCDPFGKFKGVVMQQNGHWGAQIYANHQRIWLGTFKSEKEAAMAYDSAAIKLRNGVDSHRNFPWTDHSMKEPSFQNQFSKDDVLKMIRDGSYSSKFDAFLKEKSQTEEIGLGSKQITMNLCDGKCSKIKLFQKELTPSDVGKLNRLVIPKKNATKYFPFIRENDDNDVELVFYDKLMKIWKFRYCYWKSSQSFVFTRGWNRFVKEKKLKEKDIVSFYSCEEGQNSEENGFSFCLIDIVYSKERETGGETCLAAEKICSETKNVGLELHLGNFLRFKLDGKEKENVFDGMYSIPTRVEEKGFRLFGVQITRFNT | 359 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 6679200 | 6680279 | + | Bpe004240.1 | Bpe11g00900 | 111045 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe11g00900 | 359 | Gene3D | - | 171 | 287 | IPR015300 | - | |
Bpe11g00900 | 359 | ProSiteProfiles | AP2/ERF domain profile. | 53 | 109 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe11g00900 | 359 | PANTHER | B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 | 35 | 355 | IPR044800 | GO:0003700 | |
Bpe11g00900 | 359 | SMART | rav1_2 | 53 | 115 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe11g00900 | 359 | CDD | B3_DNA | 175 | 263 | IPR003340 | GO:0003677 | |
Bpe11g00900 | 359 | SUPERFAMILY | DNA-binding domain | 53 | 110 | IPR016177 | GO:0003677 | |
Bpe11g00900 | 359 | CDD | AP2 | 53 | 111 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe11g00900 | 359 | Pfam | AP2 domain | 53 | 100 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe11g00900 | 359 | PANTHER | AP2/ERF AND B3 DOMAIN TRANSCRIPTION FACTOR | 35 | 355 | - | - | |
Bpe11g00900 | 359 | ProSiteProfiles | B3 DNA-binding domain profile. | 177 | 284 | IPR003340 | GO:0003677 | |
Bpe11g00900 | 359 | Gene3D | AP2/ERF domain | 53 | 110 | IPR036955 | GO:0003700|GO:0006355 | |
Bpe11g00900 | 359 | Pfam | B3 DNA binding domain | 177 | 266 | IPR003340 | GO:0003677 | |
Bpe11g00900 | 359 | SMART | B3_2 | 177 | 273 | IPR003340 | GO:0003677 | |
Bpe11g00900 | 359 | SUPERFAMILY | DNA-binding pseudobarrel domain | 172 | 268 | IPR015300 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe01g00642 | Bpe-Chr1:4328387 | Bpe11g00900 | Bpe-Chr11:6679200 | 3.12E-89 | dispersed | |
Bpe10g00947 | Bpe-Chr10:15006814 | Bpe11g00900 | Bpe-Chr11:6679200 | 8.97E-54 | dispersed | |
Bpe11g00900 | Bpe-Chr11:6679200 | Bpe13g00799 | Bpe-Chr13:14351945 | 3.39E-29 | dispersed | |
Bpe11g00900 | Bpe-Chr11:6679200 | Bpe11g01690 | Bpe-Chr11:13188925 | 1.38E-54 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
22069 | PF02362 | B3 | 4.30E-24 | CL0405 | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe11g00900 | K09287 | - | qsu:111998385 | 373.629 |