Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g00910 ATGAATGCAAATGACTGGCCTGCTTTCTCATTTTCACCAACTCAAACTTATCAGTCCCATCAATTCTCCCAAGGGCTAGTGAATGATCCAATGGAAAACCCATTTAACAGCCAGCATTGGAATTTGATTACTAACCAAGGAGGAAATGAAGTTCCTAAGGTGGCTGATTTTCTTGGGGTTACCAAATCAGAAAGTCAATCAGATCTATCTGCTTTTAATGGGATGCAGTCGAATGATTCAGAGTATTTATATTCAATTAACAGCATAGATCCTCTTCAAATCACCATGGCTGATTTCCAAGAAAGCTCTAACGACTTGCAGTCCTTGACTTTGTCGATGGGAAATGGAAAAAAGACTTCGACAACATGTGAAAATAGTGGTGAAAGCAGCATAATCAGTACTGTCGAGGTAACTTCAAGAAGAACTATGGAGACTTTTGGGCAAAGAACTTCAATTTATCGTGGGGTTACAAGGCATCGATGGACAGGAAGATACGAAGCTCATCTTTGGGATAACAGTTGCAGAAGGGAAGGACAATTAAGAAAAGGTCGTCAAGGTGGGTATGACAAAGAAGATAAAGCAGCTAGGGCTTATGATCTTGCAGCATTGAAATATTGGGGAACATCAACGACTACGAACTTTCCTGAAAGCGATTATGAAAGAGAATTGGAGGAGATGAAGAGCATGACAAGACAAGAATTCGTGGCCTCCATTAGAAGGAAGAGTAGTGGGTTTTCTAGAGGTGCATCAATGTACCGTGGAGTTACAAGGCATCATCAACATGGAAAATGGCAGGCAAGAATTGGAAGAGTGGCAGGAAAAAAAGATCTTTACTTGGGAACATTCGGTACCGAGGAAGAAGCCGCGGAAGCATACGACATTGCAGCCATAAAATTCCGAGGCCAAACTGCAGTGACAAACTTCGACCTGAATCGATACGACGTAAAAACCATTTTAGAAAGCAACTCTCTACCCTTCGGAGGAGCAGCAAAAAGATTTAAAGAAGCTCAGGCCATTGAATCAGCGAGAAAACGTGAAGAAATGATAGCTCTAGCTTCTGGCTTTCACTTTGGTGCCTCTAGTGAATCTTCTGCTAGGGTTCCTCTTCAATCTTTTGAGCAATCTTTCCCGTTGATTTCTCTGCAAAATCTTGAAATCTCTCATTTTTCTCAAGACCCATCATTGTTTCAGCAGAGTTATCTTCATCAACTTCACTTTCATCATCAGAATTCTGGTTTTCAGGCTAACCCATTAAGCCAAAGTCCTCAGTTCTTCGATGGGCATGATTCTGGATCATCTTCTTCGTCGGTAATCATGGAGAATAACACTGGAGGAAGACTATATAACCTAGGAAATGGAGGATATGGAGGTTGGTCCGCTGATCATCAGACTAACAACGGAGTTTTCAGTGTGTGGATCGAAGGTTGA 1428 41.67 MNANDWPAFSFSPTQTYQSHQFSQGLVNDPMENPFNSQHWNLITNQGGNEVPKVADFLGVTKSESQSDLSAFNGMQSNDSEYLYSINSIDPLQITMADFQESSNDLQSLTLSMGNGKKTSTTCENSGESSIISTVEVTSRRTMETFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQLRKGRQGGYDKEDKAARAYDLAALKYWGTSTTTNFPESDYERELEEMKSMTRQEFVASIRRKSSGFSRGASMYRGVTRHHQHGKWQARIGRVAGKKDLYLGTFGTEEEAAEAYDIAAIKFRGQTAVTNFDLNRYDVKTILESNSLPFGGAAKRFKEAQAIESARKREEMIALASGFHFGASSESSARVPLQSFEQSFPLISLQNLEISHFSQDPSLFQQSYLHQLHFHHQNSGFQANPLSQSPQFFDGHDSGSSSSSVIMENNTGGRLYNLGNGGYGGWSADHQTNNGVFSVWIEG 475
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 6744803 6747618 - Bpe004250.1 Bpe11g00910 111055
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g00910 475 ProSiteProfiles AP2/ERF domain profile. 152 215 IPR001471 GO:0003700|GO:0006355
Bpe11g00910 475 CDD AP2 151 217 IPR001471 GO:0003700|GO:0006355
Bpe11g00910 475 SUPERFAMILY DNA-binding domain 250 310 IPR016177 GO:0003677
Bpe11g00910 475 Pfam AP2 domain 152 207 IPR001471 GO:0003700|GO:0006355
Bpe11g00910 475 Pfam AP2 domain 252 301 IPR001471 GO:0003700|GO:0006355
Bpe11g00910 475 SMART rav1_2 251 315 IPR001471 GO:0003700|GO:0006355
Bpe11g00910 475 SMART rav1_2 152 221 IPR001471 GO:0003700|GO:0006355
Bpe11g00910 475 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR PLT2 16 457 - -
Bpe11g00910 475 CDD AP2 250 309 IPR001471 GO:0003700|GO:0006355
Bpe11g00910 475 ProSiteProfiles AP2/ERF domain profile. 251 309 IPR001471 GO:0003700|GO:0006355
Bpe11g00910 475 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 16 457 - -
Bpe11g00910 475 SUPERFAMILY DNA-binding domain 151 216 IPR016177 GO:0003677
Bpe11g00910 475 MobiDBLite consensus disorder prediction 417 436 - -
Bpe11g00910 475 PRINTS Ethylene responsive element binding protein signature 153 164 IPR001471 GO:0003700|GO:0006355
Bpe11g00910 475 PRINTS Ethylene responsive element binding protein signature 291 311 IPR001471 GO:0003700|GO:0006355
Bpe11g00910 475 Gene3D AP2/ERF domain 152 216 IPR036955 GO:0003700|GO:0006355
Bpe11g00910 475 Gene3D AP2/ERF domain 251 311 IPR036955 GO:0003700|GO:0006355
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe08g01222 Bpe11g00910 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00162 Bpe-Chr1:959651 Bpe11g00910 Bpe-Chr11:6744803 6.90E-08 dispersed
Bpe08g00135 Bpe-Chr8:709353 Bpe11g00910 Bpe-Chr11:6744803 1.74E-07 dispersed
Bpe11g00910 Bpe-Chr11:6744803 Bpe11g01266 Bpe-Chr11:9463537 1.05E-123 dispersed
Bpe15g01078 Bpe-Chr15:19991257 Bpe11g00910 Bpe-Chr11:6744803 7.69E-11 dispersed
Bpe11g00910 Bpe-Chr11:6744803 Bpe08g01222 Bpe-Chr8:13820585 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22071 PF00847 AP2 1.20E-08 CL0081 Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g00910 K09285 - pvy:116115844 581.252