Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe11g00910 | ATGAATGCAAATGACTGGCCTGCTTTCTCATTTTCACCAACTCAAACTTATCAGTCCCATCAATTCTCCCAAGGGCTAGTGAATGATCCAATGGAAAACCCATTTAACAGCCAGCATTGGAATTTGATTACTAACCAAGGAGGAAATGAAGTTCCTAAGGTGGCTGATTTTCTTGGGGTTACCAAATCAGAAAGTCAATCAGATCTATCTGCTTTTAATGGGATGCAGTCGAATGATTCAGAGTATTTATATTCAATTAACAGCATAGATCCTCTTCAAATCACCATGGCTGATTTCCAAGAAAGCTCTAACGACTTGCAGTCCTTGACTTTGTCGATGGGAAATGGAAAAAAGACTTCGACAACATGTGAAAATAGTGGTGAAAGCAGCATAATCAGTACTGTCGAGGTAACTTCAAGAAGAACTATGGAGACTTTTGGGCAAAGAACTTCAATTTATCGTGGGGTTACAAGGCATCGATGGACAGGAAGATACGAAGCTCATCTTTGGGATAACAGTTGCAGAAGGGAAGGACAATTAAGAAAAGGTCGTCAAGGTGGGTATGACAAAGAAGATAAAGCAGCTAGGGCTTATGATCTTGCAGCATTGAAATATTGGGGAACATCAACGACTACGAACTTTCCTGAAAGCGATTATGAAAGAGAATTGGAGGAGATGAAGAGCATGACAAGACAAGAATTCGTGGCCTCCATTAGAAGGAAGAGTAGTGGGTTTTCTAGAGGTGCATCAATGTACCGTGGAGTTACAAGGCATCATCAACATGGAAAATGGCAGGCAAGAATTGGAAGAGTGGCAGGAAAAAAAGATCTTTACTTGGGAACATTCGGTACCGAGGAAGAAGCCGCGGAAGCATACGACATTGCAGCCATAAAATTCCGAGGCCAAACTGCAGTGACAAACTTCGACCTGAATCGATACGACGTAAAAACCATTTTAGAAAGCAACTCTCTACCCTTCGGAGGAGCAGCAAAAAGATTTAAAGAAGCTCAGGCCATTGAATCAGCGAGAAAACGTGAAGAAATGATAGCTCTAGCTTCTGGCTTTCACTTTGGTGCCTCTAGTGAATCTTCTGCTAGGGTTCCTCTTCAATCTTTTGAGCAATCTTTCCCGTTGATTTCTCTGCAAAATCTTGAAATCTCTCATTTTTCTCAAGACCCATCATTGTTTCAGCAGAGTTATCTTCATCAACTTCACTTTCATCATCAGAATTCTGGTTTTCAGGCTAACCCATTAAGCCAAAGTCCTCAGTTCTTCGATGGGCATGATTCTGGATCATCTTCTTCGTCGGTAATCATGGAGAATAACACTGGAGGAAGACTATATAACCTAGGAAATGGAGGATATGGAGGTTGGTCCGCTGATCATCAGACTAACAACGGAGTTTTCAGTGTGTGGATCGAAGGTTGA | 1428 | 41.67 | MNANDWPAFSFSPTQTYQSHQFSQGLVNDPMENPFNSQHWNLITNQGGNEVPKVADFLGVTKSESQSDLSAFNGMQSNDSEYLYSINSIDPLQITMADFQESSNDLQSLTLSMGNGKKTSTTCENSGESSIISTVEVTSRRTMETFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQLRKGRQGGYDKEDKAARAYDLAALKYWGTSTTTNFPESDYERELEEMKSMTRQEFVASIRRKSSGFSRGASMYRGVTRHHQHGKWQARIGRVAGKKDLYLGTFGTEEEAAEAYDIAAIKFRGQTAVTNFDLNRYDVKTILESNSLPFGGAAKRFKEAQAIESARKREEMIALASGFHFGASSESSARVPLQSFEQSFPLISLQNLEISHFSQDPSLFQQSYLHQLHFHHQNSGFQANPLSQSPQFFDGHDSGSSSSSVIMENNTGGRLYNLGNGGYGGWSADHQTNNGVFSVWIEG | 475 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 6744803 | 6747618 | - | Bpe004250.1 | Bpe11g00910 | 111055 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe11g00910 | 475 | ProSiteProfiles | AP2/ERF domain profile. | 152 | 215 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe11g00910 | 475 | CDD | AP2 | 151 | 217 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe11g00910 | 475 | SUPERFAMILY | DNA-binding domain | 250 | 310 | IPR016177 | GO:0003677 | |
Bpe11g00910 | 475 | Pfam | AP2 domain | 152 | 207 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe11g00910 | 475 | Pfam | AP2 domain | 252 | 301 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe11g00910 | 475 | SMART | rav1_2 | 251 | 315 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe11g00910 | 475 | SMART | rav1_2 | 152 | 221 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe11g00910 | 475 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR PLT2 | 16 | 457 | - | - | |
Bpe11g00910 | 475 | CDD | AP2 | 250 | 309 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe11g00910 | 475 | ProSiteProfiles | AP2/ERF domain profile. | 251 | 309 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe11g00910 | 475 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR | 16 | 457 | - | - | |
Bpe11g00910 | 475 | SUPERFAMILY | DNA-binding domain | 151 | 216 | IPR016177 | GO:0003677 | |
Bpe11g00910 | 475 | MobiDBLite | consensus disorder prediction | 417 | 436 | - | - | |
Bpe11g00910 | 475 | PRINTS | Ethylene responsive element binding protein signature | 153 | 164 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe11g00910 | 475 | PRINTS | Ethylene responsive element binding protein signature | 291 | 311 | IPR001471 | GO:0003700|GO:0006355 | |
Bpe11g00910 | 475 | Gene3D | AP2/ERF domain | 152 | 216 | IPR036955 | GO:0003700|GO:0006355 | |
Bpe11g00910 | 475 | Gene3D | AP2/ERF domain | 251 | 311 | IPR036955 | GO:0003700|GO:0006355 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bpe08g01222 | Bpe11g00910 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe01g00162 | Bpe-Chr1:959651 | Bpe11g00910 | Bpe-Chr11:6744803 | 6.90E-08 | dispersed | |
Bpe08g00135 | Bpe-Chr8:709353 | Bpe11g00910 | Bpe-Chr11:6744803 | 1.74E-07 | dispersed | |
Bpe11g00910 | Bpe-Chr11:6744803 | Bpe11g01266 | Bpe-Chr11:9463537 | 1.05E-123 | dispersed | |
Bpe15g01078 | Bpe-Chr15:19991257 | Bpe11g00910 | Bpe-Chr11:6744803 | 7.69E-11 | dispersed | |
Bpe11g00910 | Bpe-Chr11:6744803 | Bpe08g01222 | Bpe-Chr8:13820585 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
22071 | PF00847 | AP2 | 1.20E-08 | CL0081 | Bpe | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe11g00910 | K09285 | - | pvy:116115844 | 581.252 |