Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g00922 ATGAACTCCAAATCTGAAACCAAAGATAGAGTAGAACCTCATGCACATAACATCCAACCACCCGATAGTTTCTTTGAACCTTGGTGGCGTACTGTGGAATACAATTCTATTCCCCGACCTGTGGCAGGGAACACAACCAACTCACCTTCAATTGAATGCCTAGATAGTCGAGCTGAGTCCATTGATGACCAATCAATCTCTAATGATGAGCAAAATGATACTGAAAAACAATCACATAGACTAATTGGATCTCCACTTGCTGGTGGAAAAGGTCAGCAAGATGCTGCAAGTGGGCCAAATGGGGGATCCTCCACGACTACAATGCATGGTGCATATATGGAACAACCTCCATTGATTGAACTAATAGGACATTCTACTGTAATTGATATGTTTAAATTTGCCTCTTTTGTATGGGCATGTGTGACAAATTCTTATCAGGATCCATATTACGGAGGAGTGATGACTGCTTATGGGGATCAGCTTATGGGTTATAATCCTTTTCTGGGAATGCCGCATGCTAGAATGCCTTTACCTCGCGACATGATACAAGAGCCGGTTTTTGTGAATGCTAAGCAATACCAAGGAATTTTGAGGAGAAGACAAGCACGTGCTAAAGCAGAAGTTGAAAAGAAGCTGATGAAAAATAAAAAGGTACGAGGTGGTTTCTTTAACTTATTATTTAAAATTCTTTGTTTAATTGCATCTAGTTTTGCTTCTCTATTACAGCCATATCTTCATGAATCTCGTCATAAGCATGCAATGAGAAGAGAAAGAAGCATGGGCGGACGTTTTGCCAAGAAAATGGAGGGCAATTCTGTCAACTGCTTTGGTAAAGAAATGGCATCAGATTCTGCTCCATCCAGGTCGTCGCATTCAGCTTATACATCGGCTTCTGGACTCTTAGCTACAGATGTGAATGAAACACAGACTTCCATCAATGGTCAAGAAGCAAGAAGCTGGCCTCACAAGATTATGTAA 978 41.0 MNSKSETKDRVEPHAHNIQPPDSFFEPWWRTVEYNSIPRPVAGNTTNSPSIECLDSRAESIDDQSISNDEQNDTEKQSHRLIGSPLAGGKGQQDAASGPNGGSSTTTMHGAYMEQPPLIELIGHSTVIDMFKFASFVWACVTNSYQDPYYGGVMTAYGDQLMGYNPFLGMPHARMPLPRDMIQEPVFVNAKQYQGILRRRQARAKAEVEKKLMKNKKVRGGFFNLLFKILCLIASSFASLLQPYLHESRHKHAMRRERSMGGRFAKKMEGNSVNCFGKEMASDSAPSRSSHSAYTSASGLLATDVNETQTSINGQEARSWPHKIM 325
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 6817660 6819914 + Bpe004261.2 Bpe11g00922 111067
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g00922 325 PANTHER TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED 31 217 IPR001289 GO:0003700|GO:0006355
Bpe11g00922 325 MobiDBLite consensus disorder prediction 1 25 - -
Bpe11g00922 325 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT A-9 242 316 - -
Bpe11g00922 325 MobiDBLite consensus disorder prediction 1 16 - -
Bpe11g00922 325 MobiDBLite consensus disorder prediction 96 110 - -
Bpe11g00922 325 SMART cbf3 181 267 IPR001289 GO:0003700|GO:0006355
Bpe11g00922 325 MobiDBLite consensus disorder prediction 58 110 - -
Bpe11g00922 325 Pfam CCAAT-binding transcription factor (CBF-B/NF-YA) subunit B 184 264 IPR001289 GO:0003700|GO:0006355
Bpe11g00922 325 Gene3D - 182 269 - -
Bpe11g00922 325 ProSitePatterns NF-YA/HAP2 subunit signature. 187 207 IPR018362 GO:0003677|GO:0016602
Bpe11g00922 325 ProSiteProfiles NF-YA/HAP2 family profile. 182 267 IPR001289 GO:0003700|GO:0006355
Bpe11g00922 325 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT A-9 31 217 - -
Bpe11g00922 325 PANTHER TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED 242 316 IPR001289 GO:0003700|GO:0006355
Bpe11g00922 325 MobiDBLite consensus disorder prediction 58 77 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bpe01g00318 Bpe11g00922 CCT
Bpe08g01208 Bpe11g00922 CCT
Bpe08g01208 Bpe11g00922 ECH
Bpe01g00318 Bpe11g00922 ECH
Bpe08g00276 Bpe11g00922 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00318 Bpe-Chr1:1970179 Bpe11g00922 Bpe-Chr11:6817660 6.19E-50 wgd
Bpe11g00922 Bpe-Chr11:6817660 Bpe08g00276 Bpe-Chr8:1632726 1.47E-73 wgd
Bpe11g00922 Bpe-Chr11:6817660 Bpe08g01208 Bpe-Chr8:13749015 4.20E-123 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22072 PF02045 CBFB_NFYA 2.80E-24 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g00922 K08064 - mnt:21398404 264.233