Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g00969 ATGATGATGATGTTTGAGGAGATGGGATTTTGTGGCGACTTGGATTTTCTGTCAGCACCTCCTGGAGAAGGAGATATGGCTGCTCCACAGACTGAACCTGAAGCTACTGTGGACGATGATTATTCAGATGAAGAGATCGATGTTGATGAGCTTGAGAGGAGGATGTGGAGGGACAAAATGCGTCTGAAACGGCTGAAAGAGCAGACCAAAGGGAAGGAAGGAATTGATATGGCAAAACAGCGCCAATCTCAAGAACAAGCGAGGAGGAAGAAGATGTCTAGGGCCCAAGATGGGATCTTGAAGTACATGTTGAAGATGATGGAAGTTTGCAAAGCTCAAGGGTTTGTTTATGGGATTATTCCAGAGAAGGGGAAACCCGTTACTGGAGCATCGGATAATCTCCGAGAATGGTGGAAAGATAAAGTGAGATTTGATCGAAACGGACCAGCTGCCATAGCCAAGTACCAAGCCGATAATGCAATTCCAGGCAAAAACGAAGGCTGCAATTCGATTGGAACAGAAAATGAGCCGAACTTCGACGTGCAGGATTCCAAACCAGAAAATCTCAGTTCGATCAGTTTAGGACTGGAGAGAACTCAAGATAGGCTTCCCATCCGACATTCAACTTATCCGATCAAAGGAGAAGTCGTTACAAACTTAGATTTTGTGAGGAAAAGAAAGCCGACCAGTGATTTAAACACGACTGATCAAAAAATCTATACTTGCGAGTTTCTTCAATGTCCTTACAGTGAGTCTCGACTCCGCTTTCATGACAGGACTTCTATGGACAATCATCAAATGTCTTGCCCATATCGGACTTCTTCGGACTTTGGGAGTTCAAATTTCCAATTCAACGAAGTTAAGCCAGTCATCTTCCAGTCATCTTTCGTCCAGTCCAAGCCTCCTCCGACTTTCGACTTATCCGGGCTTGGAGTTCCAGAAGAGGGGCAGAAACTGATAAGTGAGCTCATGTCAGTCTACGATACTAATATTCAAGGCGGCAAGAACTCAAATTCAGGTCCAAATGCAATGACCGATAATCAAGCTGTTTCTCTGCCGAAGATTCATCATCAGCCAAACGAATTCTTCGGAAATCAAGGTGGTGTTATTATGGAAGGCAACTTCTACCCAGATGCCAATATTTCAGTTAATCATCAGATGGTATGTCGGGAGGGAGGAGGTCAATTCGATCGATTCAAGCCCTTTGAGACCAACAATGGCAGCAATAACTTCCCGTTGATGTTTGGATCGCCATTCGAAATATCATCGTTCAACTACAAAGAAGATGTAGGGGGAGTGGCGATCAATCCGGCCTCGAAGCACCAAGATATTCCAATCTGGTACCAG 1347 44.69 MMMMFEEMGFCGDLDFLSAPPGEGDMAAPQTEPEATVDDDYSDEEIDVDELERRMWRDKMRLKRLKEQTKGKEGIDMAKQRQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVTGASDNLREWWKDKVRFDRNGPAAIAKYQADNAIPGKNEGCNSIGTENEPNFDVQDSKPENLSSISLGLERTQDRLPIRHSTYPIKGEVVTNLDFVRKRKPTSDLNTTDQKIYTCEFLQCPYSESRLRFHDRTSMDNHQMSCPYRTSSDFGSSNFQFNEVKPVIFQSSFVQSKPPPTFDLSGLGVPEEGQKLISELMSVYDTNIQGGKNSNSGPNAMTDNQAVSLPKIHHQPNEFFGNQGGVIMEGNFYPDANISVNHQMVCREGGGQFDRFKPFETNNGSNNFPLMFGSPFEISSFNYKEDVGGVAINPASKHQDIPIWYQ 449
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 7213564 7215387 - Bpe024810 Bpe11g00969 111114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g00969 449 MobiDBLite consensus disorder prediction 20 42 - -
Bpe11g00969 449 Gene3D - 81 160 IPR023278 GO:0003700|GO:0005634
Bpe11g00969 449 MobiDBLite consensus disorder prediction 67 92 - -
Bpe11g00969 449 Coils Coil 48 68 - -
Bpe11g00969 449 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 2 173 IPR006957 GO:0005634
Bpe11g00969 449 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 172 448 IPR006957 GO:0005634
Bpe11g00969 449 PANTHER ETHYLENE INSENSITIVE 3-LIKE 1 PROTEIN 2 173 - -
Bpe11g00969 449 PANTHER ETHYLENE INSENSITIVE 3-LIKE 1 PROTEIN 172 448 - -
Bpe11g00969 449 Pfam Ethylene insensitive 3 49 185 IPR006957 GO:0005634
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe11g00907 Bpe-Chr11:6724451 Bpe11g00969 Bpe-Chr11:7213564 5.04E-54 dispersed
Bpe04g01634 Bpe-Chr4:22552675 Bpe11g00969 Bpe-Chr11:7213564 3.76E-112 transposed
Bpe11g00969 Bpe-Chr11:7213564 Bpe08g01163 Bpe-Chr8:13394047 3.30E-104 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22078 PF04873 EIN3 2.70E-58 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g00969 K14514 - qsu:111991923 342.428