Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe11g00973 | ATGAGTCAGCCTAATTTGAAGCGTAGAGTGGGTAAATATGAGGTTGGAAGAACAATTGGCGAGGGAACATTTGCGAAAGTCAAATTTGCAAAGAATTCAGAGACGGGAGAACCGGTTGCCCTTAAAATACTAGATAAAGAGAAAGTTCTTAAGCACAAGATGGCAGAACAGATCAAGCGGGAGGTAGCAACAATGAAGTTAATAAAGCATCCGAATGTGGTGCAATTGTATGAGGTAATGGGAAGCAGGACGAAAATATTCATTGTTTTGGAGTTTGTTACTGGCGGGGAACTATTTGACAAAATTGCCAACCATGGTCGTATGAGAGAGGATGAAGCGAGGCGATATTTTCAGCAGCTTATAAATGCAGTTGACTATTGCCATAGCAGGGGTGTCTACCATAGGGACCTTAAGCCGGAAAATCTGCTTTTAGATGCTTATGGAAACCTTAAAGTTTCTGATTTTGGATTAAGTGCACTGTCTCAACAAGTCAGGGACGATGGTTTGCTTCACACTACTTGTGGAACTCCAAATTATGTTGCTCCTGAGGTCCTCAATGATAGAGGCTATGATGGGGCGATTGCGGATTTGTGGTCGTGCGGAGTCATACTCTTTGTACTCCTCGCAGGTTACTTGCCTTTCGATGATTCTAATCTTATGACCCTTTATCGAAAAATTTCGGCTGCTGAATTTACTTGCCCTCCATGGCTATCTTTCGACGCCATGAAATTGATCGCTCGGATTTTGGATCCTAATCCTATGACTCGAATCTCGATACCTGAAATTTTAAGCGATGCATGGTTTAAGAAGGACTACAGTCCGCCTGTATTCGACGAGAAGCACTGCACAAATTTGGATGATGTGGAAGCTGTTTTTAAAGATTCAGAGGAACACCATGTGACGGAGAAGAAAGAAGAGCAGCCAGTTGCAATGAATGCCTTTGATCTAATATCCATGTCCAAAGGACTGAACCTCGAAAATTTGTTCGATGCCGAACAGGAATTTAAGAGAGAAACTAGGTTTACATCTAAATGCGCTGCAAATGACATAATAAACAAGATAGAAGAGGCTGCAAAACCTCTTGGTTTTGATGTACAAAAGAAAAATTACAAGATGAGGCTTGAAAATTCAAAAGCCGGGAGGAAGGGAAACCTTAAAATTGCGACTCAGATTTTTCAAGTGGCACCCTCTCTTCACATGGTAGAGGTACGAAAAGCAAAGGGCGACACTTTGGAGTTTCATAAGTTCTACAAAAACCTCTCGACTTCGTTGGATGACGTCGTGTGGAAGACGGAGGAAGACATGACGAAAACCTAA | 1317 | 42.07 | MSQPNLKRRVGKYEVGRTIGEGTFAKVKFAKNSETGEPVALKILDKEKVLKHKMAEQIKREVATMKLIKHPNVVQLYEVMGSRTKIFIVLEFVTGGELFDKIANHGRMREDEARRYFQQLINAVDYCHSRGVYHRDLKPENLLLDAYGNLKVSDFGLSALSQQVRDDGLLHTTCGTPNYVAPEVLNDRGYDGAIADLWSCGVILFVLLAGYLPFDDSNLMTLYRKISAAEFTCPPWLSFDAMKLIARILDPNPMTRISIPEILSDAWFKKDYSPPVFDEKHCTNLDDVEAVFKDSEEHHVTEKKEEQPVAMNAFDLISMSKGLNLENLFDAEQEFKRETRFTSKCAANDIINKIEEAAKPLGFDVQKKNYKMRLENSKAGRKGNLKIATQIFQVAPSLHMVEVRKAKGDTLEFHKFYKNLSTSLDDVVWKTEEDMTKT | 438 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 7228150 | 7233243 | - | Bpe004305.2 | Bpe11g00973 | 111118 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe11g00973 | 438 | ProSiteProfiles | NAF domain profile. | 306 | 330 | IPR018451 | GO:0007165 | |
Bpe11g00973 | 438 | ProSiteProfiles | Protein kinase domain profile. | 13 | 268 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bpe11g00973 | 438 | Pfam | Protein kinase domain | 13 | 268 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bpe11g00973 | 438 | Gene3D | Phosphorylase Kinase; domain 1 | 3 | 92 | - | - | |
Bpe11g00973 | 438 | Gene3D | Transferase(Phosphotransferase) domain 1 | 93 | 275 | - | - | |
Bpe11g00973 | 438 | PANTHER | CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 3 | 3 | 432 | - | - | |
Bpe11g00973 | 438 | SUPERFAMILY | Protein kinase-like (PK-like) | 9 | 296 | IPR011009 | - | |
Bpe11g00973 | 438 | SMART | serkin_6 | 13 | 268 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bpe11g00973 | 438 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 132 | 144 | IPR008271 | GO:0004672|GO:0006468 | |
Bpe11g00973 | 438 | PANTHER | - | 3 | 432 | - | - | |
Bpe11g00973 | 438 | CDD | STKc_SnRK3 | 12 | 267 | - | - | |
Bpe11g00973 | 438 | Gene3D | Kinase associated domain 1, KA1 | 305 | 430 | - | - | |
Bpe11g00973 | 438 | Pfam | NAF domain | 308 | 367 | IPR004041 | GO:0007165 | |
Bpe11g00973 | 438 | ProSitePatterns | Protein kinases ATP-binding region signature. | 19 | 42 | IPR017441 | GO:0005524 | |
Bpe11g00973 | 438 | CDD | CIPK_C | 312 | 421 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe01g00675 | Bpe-Chr1:4820344 | Bpe11g00973 | Bpe-Chr11:7228150 | 6.17E-145 | dispersed | |
Bpe01g00862 | Bpe-Chr1:17657866 | Bpe11g00973 | Bpe-Chr11:7228150 | 0 | dispersed | |
Bpe05g00792 | Bpe-Chr5:21266905 | Bpe11g00973 | Bpe-Chr11:7228150 | 3.49E-150 | dispersed | |
Bpe08g00623 | Bpe-Chr8:5144494 | Bpe11g00973 | Bpe-Chr11:7228150 | 0 | dispersed | |
Bpe11g00973 | Bpe-Chr11:7228150 | Bpe14g00922 | Bpe-Chr14:6876097 | 0 | dispersed | |
Bpe11g00973 | Bpe-Chr11:7228150 | Bpe08g01046 | Bpe-Chr8:12655465 | 0 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
63579 | PF00069 | Pkinase | 2.30E-70 | CL0016 | Bpe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe11g00973 | - | - | cpap:110810700 | 818.92 |