Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g00973 ATGAGTCAGCCTAATTTGAAGCGTAGAGTGGGTAAATATGAGGTTGGAAGAACAATTGGCGAGGGAACATTTGCGAAAGTCAAATTTGCAAAGAATTCAGAGACGGGAGAACCGGTTGCCCTTAAAATACTAGATAAAGAGAAAGTTCTTAAGCACAAGATGGCAGAACAGATCAAGCGGGAGGTAGCAACAATGAAGTTAATAAAGCATCCGAATGTGGTGCAATTGTATGAGGTAATGGGAAGCAGGACGAAAATATTCATTGTTTTGGAGTTTGTTACTGGCGGGGAACTATTTGACAAAATTGCCAACCATGGTCGTATGAGAGAGGATGAAGCGAGGCGATATTTTCAGCAGCTTATAAATGCAGTTGACTATTGCCATAGCAGGGGTGTCTACCATAGGGACCTTAAGCCGGAAAATCTGCTTTTAGATGCTTATGGAAACCTTAAAGTTTCTGATTTTGGATTAAGTGCACTGTCTCAACAAGTCAGGGACGATGGTTTGCTTCACACTACTTGTGGAACTCCAAATTATGTTGCTCCTGAGGTCCTCAATGATAGAGGCTATGATGGGGCGATTGCGGATTTGTGGTCGTGCGGAGTCATACTCTTTGTACTCCTCGCAGGTTACTTGCCTTTCGATGATTCTAATCTTATGACCCTTTATCGAAAAATTTCGGCTGCTGAATTTACTTGCCCTCCATGGCTATCTTTCGACGCCATGAAATTGATCGCTCGGATTTTGGATCCTAATCCTATGACTCGAATCTCGATACCTGAAATTTTAAGCGATGCATGGTTTAAGAAGGACTACAGTCCGCCTGTATTCGACGAGAAGCACTGCACAAATTTGGATGATGTGGAAGCTGTTTTTAAAGATTCAGAGGAACACCATGTGACGGAGAAGAAAGAAGAGCAGCCAGTTGCAATGAATGCCTTTGATCTAATATCCATGTCCAAAGGACTGAACCTCGAAAATTTGTTCGATGCCGAACAGGAATTTAAGAGAGAAACTAGGTTTACATCTAAATGCGCTGCAAATGACATAATAAACAAGATAGAAGAGGCTGCAAAACCTCTTGGTTTTGATGTACAAAAGAAAAATTACAAGATGAGGCTTGAAAATTCAAAAGCCGGGAGGAAGGGAAACCTTAAAATTGCGACTCAGATTTTTCAAGTGGCACCCTCTCTTCACATGGTAGAGGTACGAAAAGCAAAGGGCGACACTTTGGAGTTTCATAAGTTCTACAAAAACCTCTCGACTTCGTTGGATGACGTCGTGTGGAAGACGGAGGAAGACATGACGAAAACCTAA 1317 42.07 MSQPNLKRRVGKYEVGRTIGEGTFAKVKFAKNSETGEPVALKILDKEKVLKHKMAEQIKREVATMKLIKHPNVVQLYEVMGSRTKIFIVLEFVTGGELFDKIANHGRMREDEARRYFQQLINAVDYCHSRGVYHRDLKPENLLLDAYGNLKVSDFGLSALSQQVRDDGLLHTTCGTPNYVAPEVLNDRGYDGAIADLWSCGVILFVLLAGYLPFDDSNLMTLYRKISAAEFTCPPWLSFDAMKLIARILDPNPMTRISIPEILSDAWFKKDYSPPVFDEKHCTNLDDVEAVFKDSEEHHVTEKKEEQPVAMNAFDLISMSKGLNLENLFDAEQEFKRETRFTSKCAANDIINKIEEAAKPLGFDVQKKNYKMRLENSKAGRKGNLKIATQIFQVAPSLHMVEVRKAKGDTLEFHKFYKNLSTSLDDVVWKTEEDMTKT 438
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 7228150 7233243 - Bpe004305.2 Bpe11g00973 111118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g00973 438 ProSiteProfiles NAF domain profile. 306 330 IPR018451 GO:0007165
Bpe11g00973 438 ProSiteProfiles Protein kinase domain profile. 13 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe11g00973 438 Pfam Protein kinase domain 13 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe11g00973 438 Gene3D Phosphorylase Kinase; domain 1 3 92 - -
Bpe11g00973 438 Gene3D Transferase(Phosphotransferase) domain 1 93 275 - -
Bpe11g00973 438 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 3 3 432 - -
Bpe11g00973 438 SUPERFAMILY Protein kinase-like (PK-like) 9 296 IPR011009 -
Bpe11g00973 438 SMART serkin_6 13 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe11g00973 438 ProSitePatterns Serine/Threonine protein kinases active-site signature. 132 144 IPR008271 GO:0004672|GO:0006468
Bpe11g00973 438 PANTHER - 3 432 - -
Bpe11g00973 438 CDD STKc_SnRK3 12 267 - -
Bpe11g00973 438 Gene3D Kinase associated domain 1, KA1 305 430 - -
Bpe11g00973 438 Pfam NAF domain 308 367 IPR004041 GO:0007165
Bpe11g00973 438 ProSitePatterns Protein kinases ATP-binding region signature. 19 42 IPR017441 GO:0005524
Bpe11g00973 438 CDD CIPK_C 312 421 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00675 Bpe-Chr1:4820344 Bpe11g00973 Bpe-Chr11:7228150 6.17E-145 dispersed
Bpe01g00862 Bpe-Chr1:17657866 Bpe11g00973 Bpe-Chr11:7228150 0 dispersed
Bpe05g00792 Bpe-Chr5:21266905 Bpe11g00973 Bpe-Chr11:7228150 3.49E-150 dispersed
Bpe08g00623 Bpe-Chr8:5144494 Bpe11g00973 Bpe-Chr11:7228150 0 dispersed
Bpe11g00973 Bpe-Chr11:7228150 Bpe14g00922 Bpe-Chr14:6876097 0 dispersed
Bpe11g00973 Bpe-Chr11:7228150 Bpe08g01046 Bpe-Chr8:12655465 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63579 PF00069 Pkinase 2.30E-70 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g00973 - - cpap:110810700 818.92