Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g00980 ATGAGCGATTCGGGTTATTCGAATACTCGGAAAGTCCGAAACATATGCATTCTAGCCCATGTTGATCACGGAAAAACTACGCTTGCCGATCATCTGATTGCCGCGTCGGGTGGCGGCGTACTCCACCCGAAGCTGGCTGGTCGCCTTCGATTCATGGATTATCTGGACGAAGAGCAAAGGCGGGCTATAACAATGAAAAGCTCTTCTATCGCTCTTGACTACGGAGACTATTCAATAAATCTCATAGACTCCCCTGGGCATATGGACTTCTGTAGTGAGGTTTCCACTGCTGCTAGACTCAGCGATGGGGCTTTGGTGCTGGTTGATTCGGTGGAGGGAGTTCACATTCAAACACACGCAGTTTTGCGCCAAGCTTGGATTGAGAAGCTAACACCTTGTTTAGTTCTTAATAAGATTGATAGATTGATTTGTGAGTTGAAGTTGAGCCCCATGGAAGCCTATAACCGATTGTTGAGGATCATTCATGAAGTTAATGGGATTATGAGTGCATATAAGTCGGAGAAGTATTTGTCTGATGTGGATTCGTTACTAGCTGGACCTTTCGGTGATGTAAGTGACGAAAACCTCGAGTATATTGATGACGAGAATGAGGATACATTTCAACCTCAGAAAGGTAATGTCGTCTTCGTGTGTGCTTTAGATGGTTGGGGTTTTGGAATCAATGAGTTTGCCGAGTTTTATGCATCGAAACTTGGGGCAAGTGTGGCCACTTTGAAGAAGGCGTTGTGGGGGCCTCGTTATTTCAACCCAAAAACGAAAATGATTGTGGGGAAGAAGGGATTAAGTGCTGGAAGTAAAGCTCGGCCGATGTTTGTTCAGTTTGTGCTGGAGCGGCTATGGGAAGTGTACAAGGCAGCTTTGGACTCCGATGGGGACAAAGATGTTCTTAGAAAAGTTAATAGCACATTTAATTTGAATGTTCCATCCCGCGAGCTGTCTAACAAGGATCCAAAAGTTGTTCTTCAAGCTATTATGAGCAGGTGGCTTCCTTTGTCCGAGGCAATACTGTCAATGGTTGTGAAGTGTATGCCAGACCCAATTGCAGCACAATCATTTCGAATATCACGTTTGCTTCCAAAGCGGGACATTTTGGACGATGAGGGTGATATCAGTGTGCTTACACAGGCCGAGGCTGTGAGAAAATCAATCGAGGCTTGTGATTCTGACGTTGAAGCTCCATGCGTTGCTTTTGTGTCCAAAATGTTTGCTGTGCCTATGAAAATGATTCCTCAGAGGGGGCCCCAAGGAGAGATTGTGAGCAATTTATCTGATGAGGGGGGAGTAGGTGACTCAGATGAGTGTTTTCTAGCGTTTGCACGGGTATTTAGCGGCGTACTTTGTTCGGGGCAGAAAATTTTTGTGCTTTCTGCTTTATATGATCCATTACTAGAGGAATCGGTAGAGAAGCATGTTCAGGAGGCTGAGTTGCATTCATTGTACTTAATGATGGGGCAAGGCTTAAAACCAGTGAGATCGGTCAAGGCAGGGAATGTTGTGGCCATACGAGGCCTTGGCCAGCATATCTTGAAAAGTGCGACTCTTTCAGCCACAAAAAATTGTTGGCCTTTCTCAAGTATGGAATTTCAAGTTTCTCCAACACTTAGAGTTGCAATCGAACCTTCTGACCCAGCAGATATGGTTGCACTTTTAAGAGGCTTAAGACTGCTAAATCGAGCAGACCCATTTGTAGAGGTCACTGTTTCTGCTAGAGGGGAACATGTTCTCTCGGCTGCCGGAGAAGTTCATCTCGAGCGATGCATAAAGGATTTGAAAGACAGATTTGCCAAGGTAAGCTTGGAAGTCTCTCCACCTCTTGTATCTTATAAAGAGACGATTGAAGGAGAGGTGTCTGGTATAATGGATATAGTGAAATTGTTTAGTGGAAACTCAGATTTTGTTGAAAAAACGACACCAAATGGGCGTTGTGTTGTGCGTGTTCAGGTAATGAAGCTTCCGCTTGCGCTCACAAAAGTGCTTGATGAAAATTCTGATATACTAGCAGATATCATTGGAGTAAAAGCCGGACAGAGCAGTAAAGTTGCCGAAAGTAAAAGATCAAGGATTGGACAAAACGAGAGTTCGGTGGAATCAGTTAAAAAGCGTATAATTGATGCTGTGTTTAGCGGCATTTTGCCGACAAACGAGAAAGATAACGATGGAGACCGAGTTGACAAGTATAAAGCAATGTGGTCGAAACTCCTCCAGAGGATTTGGGCTCTTGGACCTCGGCAGGTTGGTCCAAACATTCTATTTACCCCAGAGTTTAAAAGGATGGATTCTGAAAATTGCATGCTTGTTCATGGCCCCTCTTATGTATCCGAGAGATTAGGCTTTATAAATGAGACTAGAAATGTCAATTTGGATGCTAATGCTGATCTAGATCACGACTCTGCTGCTTCAACATCACCAAAAGCATCTCAACCACTATGTATGGAGGCAGAGAGTTTTGAGAGCAGTGTTGTATCTGGATTTCAGTTGGCTACATCAGCCGGACCTTTATGTGATGAACCAATGTGGGGCTTGGGATTTATTGTCGAAGCCTATGTTCATCCATCAACTGATCACCCACATGAACTTGAAACGTCCATACTCTCTGATCAGCGAGGAATTTTCACCGGACAAGTTATGACAGCAGTCAAAGAGGCTTGTAGAAGTGCTCTACTTCAAAAGAAGCCTCGGCTGGTTGAAGCCTTGTACTTTTGCGAATTGAGCACACCCACTGAATATCTTGGACCAATGTATGCTGTGCTGGCCCGAAGGCGGGCCCGTGTTTTGAAGGAAGAAATGCAAGAGGGTTCGTCTTTGTTTACCGTCCATGCATATGTGCCGGTTTCCGAGAGCCTCGGCTTCGCTGACGAGTTAAGAAGATGGACATCTGGAGCTGCTAGTGCTCTCTTTGTGCTTAGCCATTGGGAAGCACTTCCTGAAGATCCTTTCTTTGTCCCCAAAACGGAAGAAGAGATCGAAGAGTTTGGAGACGGTTCGAGTGTGCTTCCTAATACGGCCCGGAAGCTCATCAATGCAGTCAGAAGGCGAAAAGGTCTTCCTGTTGAAGAAAAAGTCGTCCAACACGCAACAAAGCAGAGGACTTTGGCCCGGAAAGTGTAA 3129 45.09 MSDSGYSNTRKVRNICILAHVDHGKTTLADHLIAASGGGVLHPKLAGRLRFMDYLDEEQRRAITMKSSSIALDYGDYSINLIDSPGHMDFCSEVSTAARLSDGALVLVDSVEGVHIQTHAVLRQAWIEKLTPCLVLNKIDRLICELKLSPMEAYNRLLRIIHEVNGIMSAYKSEKYLSDVDSLLAGPFGDVSDENLEYIDDENEDTFQPQKGNVVFVCALDGWGFGINEFAEFYASKLGASVATLKKALWGPRYFNPKTKMIVGKKGLSAGSKARPMFVQFVLERLWEVYKAALDSDGDKDVLRKVNSTFNLNVPSRELSNKDPKVVLQAIMSRWLPLSEAILSMVVKCMPDPIAAQSFRISRLLPKRDILDDEGDISVLTQAEAVRKSIEACDSDVEAPCVAFVSKMFAVPMKMIPQRGPQGEIVSNLSDEGGVGDSDECFLAFARVFSGVLCSGQKIFVLSALYDPLLEESVEKHVQEAELHSLYLMMGQGLKPVRSVKAGNVVAIRGLGQHILKSATLSATKNCWPFSSMEFQVSPTLRVAIEPSDPADMVALLRGLRLLNRADPFVEVTVSARGEHVLSAAGEVHLERCIKDLKDRFAKVSLEVSPPLVSYKETIEGEVSGIMDIVKLFSGNSDFVEKTTPNGRCVVRVQVMKLPLALTKVLDENSDILADIIGVKAGQSSKVAESKRSRIGQNESSVESVKKRIIDAVFSGILPTNEKDNDGDRVDKYKAMWSKLLQRIWALGPRQVGPNILFTPEFKRMDSENCMLVHGPSYVSERLGFINETRNVNLDANADLDHDSAASTSPKASQPLCMEAESFESSVVSGFQLATSAGPLCDEPMWGLGFIVEAYVHPSTDHPHELETSILSDQRGIFTGQVMTAVKEACRSALLQKKPRLVEALYFCELSTPTEYLGPMYAVLARRRARVLKEEMQEGSSLFTVHAYVPVSESLGFADELRRWTSGAASALFVLSHWEALPEDPFFVPKTEEEIEEFGDGSSVLPNTARKLINAVRRRKGLPVEEKVVQHATKQRTLARKV 1042
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 7296321 7299449 - Bpe004311.1 Bpe11g00980 111125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g00980 1042 CDD EF2 13 235 - -
Bpe11g00980 1042 CDD EF2_II 400 524 - -
Bpe11g00980 1042 SUPERFAMILY EF-G C-terminal domain-like 903 1001 IPR035647 -
Bpe11g00980 1042 SUPERFAMILY EF-G C-terminal domain-like 537 611 IPR035647 -
Bpe11g00980 1042 PANTHER - 4 1041 - -
Bpe11g00980 1042 SUPERFAMILY Translation proteins 391 533 IPR009000 -
Bpe11g00980 1042 Pfam Elongation factor G C-terminus 901 985 IPR000640 -
Bpe11g00980 1042 Gene3D Yeast translation eEF2 (G' domain) 227 336 - -
Bpe11g00980 1042 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 7 351 IPR027417 -
Bpe11g00980 1042 Pfam Elongation factor Tu GTP binding domain 11 341 IPR000795 GO:0003924|GO:0005525
Bpe11g00980 1042 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 10 242 IPR000795 GO:0003924|GO:0005525
Bpe11g00980 1042 CDD aeEF2_snRNP_like_IV 610 907 - -
Bpe11g00980 1042 Gene3D - 635 897 IPR014721 -
Bpe11g00980 1042 SUPERFAMILY Ribosomal protein S5 domain 2-like 613 902 IPR020568 -
Bpe11g00980 1042 Gene3D - 899 1034 - -
Bpe11g00980 1042 PANTHER TRANSLATION ELONGATION FACTOR-RELATED 4 1041 - -
Bpe11g00980 1042 CDD eEF2_snRNP_like_C 903 982 - -
Bpe11g00980 1042 Pfam Elongation factor Tu domain 2 443 521 IPR004161 GO:0005525
Bpe11g00980 1042 SMART EFG_C_a 900 989 IPR000640 -
Bpe11g00980 1042 Gene3D - 5 215 IPR027417 -
Bpe11g00980 1042 PRINTS GTP-binding elongation factor signature 14 27 IPR000795 GO:0003924|GO:0005525
Bpe11g00980 1042 PRINTS GTP-binding elongation factor signature 96 107 IPR000795 GO:0003924|GO:0005525
Bpe11g00980 1042 PRINTS GTP-binding elongation factor signature 80 90 IPR000795 GO:0003924|GO:0005525
Bpe11g00980 1042 PRINTS GTP-binding elongation factor signature 132 141 IPR000795 GO:0003924|GO:0005525
Bpe11g00980 1042 PRINTS GTP-binding elongation factor signature 60 68 IPR000795 GO:0003924|GO:0005525
Bpe11g00980 1042 Gene3D Translation factors 353 536 - -
Bpe11g00980 1042 Gene3D Elongation Factor G (Translational Gtpase), domain 3 538 614 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe11g00980 Bpe-Chr11:7296321 Bpe12g00290 Bpe-Chr12:3625686 1.86E-138 dispersed
Bpe11g00980 Bpe-Chr11:7296321 Bpe02g02156 Bpe-Chr2:22840038 1.15E-28 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g00980 K14536 - csv:101220903 1585.47