Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe11g01066 | ATGTCCACCATTAGAGCATATGCGAAGTTCAATGAAGCCGAGCAGATGATGCTCGATGCCCGCCGGAGAACAAGAAAGAGAATTGTCATTATCGTTTCATCTTCTGTTGTTCTCGTGGGCGTTGTTCTAGCTGCTGTTTTTGGAACTGCAAGCTCCAGAAATGGAGGAAAATCTAACAATGGTGGAAACGCTAACCCTCTCTCCACCTCTATTAAAGCAGTCTGCGACGGTCTCTCCTCGTCGGAAGCCTCTCTAACTGACACCATTGATGACCTCCGAACATGGCTGAGCTCCGCGACAACGTATCAACAAACCTGCATAGATGGGTTGGAAGACGTTAGTGAAGCATTGAAAAATTCCATTTCCGGGTACTTGAGAAACTCAACTGAATACTCAAGCAACGGGCTGGCCATCGTCACGTTGCTGTCAAGCTTCACGGGGTCTCTGAAACTCCGGCGACTAATGGGGGAGCCGGAGTGGGTGAGCCCGGCGACGAGGCGGCTGTTGCAGAGCGATTTGAGGAACCAGGCGGATATAGTGGTGGCCAAAGATGGATCGGGGAAGTACGACACGATAAGGAGAATGACTTCCACCATTGTTTCTGCAAGTCTGAACTTCGTTGACGGCACTCCTACTTTCTCCTCTGCAACTTTCGCTGCAATGGGGCAAAACTTCATAGCAAGAGACATGGGTTTCCGCAACACCGCCGGAGCTAGCAAGTACCAAGCCGTCGCCCTAATGTCCGCCTCCGATCAATCCATCTTCTACCGCTGCCTCTTCGACGCCTACCAAGACACTCTCTACACCCATTCCAACCGCCAGTTCTACAGGGAATGCAACATCTACGGCACCGTCGATTTCATCTTCGGAAACTCCGCCGTCGTCATCCAAAGTTCGTTCATATTCCCCCGATTGCCGATGCAAGGCCAGCAAAACACGATCACGGCTCAGGGAAAGTTTGATCCCAATCAAAACACCGGCATTTCGATTCAAAACTGTACGGTCATGCCGTTCGGAAACCTAGGTTCTACTCAAACATACCTTGGTCGGCCGTGGACGAACTACTCGACGACCGTTTATATTCAGAATAATCTGGGGTCTTTGATTAACCCCGCCGGATGGTTACCATGGGTCGGAGGCCTCTTCCGGGTCGTGACAGTCGGCGGTTCGGCTCCGAGCACCATCTTCTACGCCGAGTTTCAGAATTTCGGAGCTGGGTCTTCGACTGCGAAGAGAGTGAAGTGGAAGGGAGTAAGGCATATTAATGGAGCTCAGGCGTTTCTTAAAGAAGCTGGCTGGGCTGATAGTGGACGTGTAATTGCTTGCACCCAACCCAGACGTTTGGCAGTTCAGGCTGTTGCTTCGAGGGTGGCTGAAGAGATGGATGTCAAGCTTGGAGAGGAAGTTGGTTATACAATCCGATTCGAAGATCTTACAACTCCGGGTATAACTAGGGTAAAATTTCTGACAGATGGAGTCTTGCTAAGGGAAATGATGGATGATCCTCTTTTGACCAAATATAGTGTAATAATGGTTGATGAGGCTCACGAGAGATCCATATCAACAGACATGCTATTGGGTCTTTTAAAAAAGATCAAACGAGTTCGACCTGAGCTGCGGTTAATTATATCTTCTGCTACAATTGAAGCACAATCCATGGCTTCTTTCTTTCAGACCAGCAAAAGACACCGGGAAGTCGAAAATGATGTGTCTGTACCAAAGGCGGAGCCAGCTATTCTATCAGTGGAGGGTAGAGGGTTTAATGTACAAATTCTTTATATTGAGGAGCCTGTTTCCAACTATATTCAAGCTGCTGTGTCAACAGTAATGTCGATTCATGATAAGGAAGCTACAGGAGACATTCTTGTATTTCTTACTGGCCAAGATGATATTGAGACAGCTGTTAATTTACTCACAGATGAAGCCCGGAACATAGGCAGAGATTCTCCAGGATTGATTATTTTGCCTCTGTACTCTGGACTTCCTCGTTCTGACCAGGAATTGATATTTTCACCCACTCCTAGAGGGAAGAGGAAAGTAGTGATTTCAACAAATATAGCAGAGACATCATTGACCCTGGAGGGCATTGTCTATGTTGTTGATAGTGGATTTTCAAAGCAGCGGTTCTACAATCCGATATCAGATATTGAAAGCCTCGTATTGGCACCGATATCAAAGGCATCTGCTAGGCAAAGGGCTGGTAGAGCTGGAAGAGTTCGACCAGGGAAGTGCTATAGACTATACACAGAGGAATACTTCACTAAAGAGATGTTATCTGGGGGAATTCCAGAAATTCAGAGATCTAATTTAGCTTCTTGTGTAATTCAATTGAAAGCATTGGGAGTCGATAATATACTTGGCTTTGACTGGCCAGCATCTCCATCTCATGAATCTATGGTTCGGGCTCTTGAAGTGCTTTATTCGCTCGGAATCTTAGATGATGATGGCAAGCTTACTTCACCCTTGGGATTTCAAGTTACAGAGATTCCATTAGAACCAATGATCTCAAAAATGATAATAACTTCAAGCCAGCTTGGATGCTCGGAGGAGGTTCTTACCATTGCTGCTTCTATTTGGATTTCGAATAGAGGAGCGCAGAAAGAACTTGATGAAGCAAGGTTAAGATTTGCTGCTGCTGAGGGTGACCATGTGACCTTCCTGAATGTGTACAAAGGATTTCTACAATCTGGGAAATCTTCTCAATGGTGTCATAAAAACTGTGTCAATTACCATGCGATGAAAAAAGTTATTGAGGTTAGAGATCAGCTCAGAAAAACAGCGCAAAGACTAGGCATCGTCTTGAAATCGTGCCAAGGAGATACGACGGCACTCAGAAAGGCAGTGACTGCCGGATTTTTTGCCAATGCTTGTCGGTTAGAAGCATTCAGCCACAGTGGGATGTACAAGACTGTTAGAGGCTCGCAAGAAGTCTATATTCACCCCTCTTCAGTCTTATTCAGAGTGAATCCAAAGTGGGTTATCTATCACTCGCTTGTGTCCACCGATCGACAATACATGCGCAATGTTATTTCAATCGAGCCGTCATGGTTAACCGAGGCTGCACCCCATTTTTTCCAACACAAGAACCATAGTCTCATGCCCCACTAA | 3108 | 46.36 | MSTIRAYAKFNEAEQMMLDARRRTRKRIVIIVSSSVVLVGVVLAAVFGTASSRNGGKSNNGGNANPLSTSIKAVCDGLSSSEASLTDTIDDLRTWLSSATTYQQTCIDGLEDVSEALKNSISGYLRNSTEYSSNGLAIVTLLSSFTGSLKLRRLMGEPEWVSPATRRLLQSDLRNQADIVVAKDGSGKYDTIRRMTSTIVSASLNFVDGTPTFSSATFAAMGQNFIARDMGFRNTAGASKYQAVALMSASDQSIFYRCLFDAYQDTLYTHSNRQFYRECNIYGTVDFIFGNSAVVIQSSFIFPRLPMQGQQNTITAQGKFDPNQNTGISIQNCTVMPFGNLGSTQTYLGRPWTNYSTTVYIQNNLGSLINPAGWLPWVGGLFRVVTVGGSAPSTIFYAEFQNFGAGSSTAKRVKWKGVRHINGAQAFLKEAGWADSGRVIACTQPRRLAVQAVASRVAEEMDVKLGEEVGYTIRFEDLTTPGITRVKFLTDGVLLREMMDDPLLTKYSVIMVDEAHERSISTDMLLGLLKKIKRVRPELRLIISSATIEAQSMASFFQTSKRHREVENDVSVPKAEPAILSVEGRGFNVQILYIEEPVSNYIQAAVSTVMSIHDKEATGDILVFLTGQDDIETAVNLLTDEARNIGRDSPGLIILPLYSGLPRSDQELIFSPTPRGKRKVVISTNIAETSLTLEGIVYVVDSGFSKQRFYNPISDIESLVLAPISKASARQRAGRAGRVRPGKCYRLYTEEYFTKEMLSGGIPEIQRSNLASCVIQLKALGVDNILGFDWPASPSHESMVRALEVLYSLGILDDDGKLTSPLGFQVTEIPLEPMISKMIITSSQLGCSEEVLTIAASIWISNRGAQKELDEARLRFAAAEGDHVTFLNVYKGFLQSGKSSQWCHKNCVNYHAMKKVIEVRDQLRKTAQRLGIVLKSCQGDTTALRKAVTAGFFANACRLEAFSHSGMYKTVRGSQEVYIHPSSVLFRVNPKWVIYHSLVSTDRQYMRNVISIEPSWLTEAAPHFFQHKNHSLMPH | 1035 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 7995301 | 8014547 | - | Bpe004393.2 | Bpe11g01066 | 111211 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe11g01066 | 1035 | Pfam | Helicase associated domain (HA2) | 802 | 859 | IPR007502 | GO:0004386 | |
Bpe11g01066 | 1035 | PANTHER | OS05G0389800 PROTEIN | 426 | 1029 | - | - | |
Bpe11g01066 | 1035 | SMART | ha2_5 | 801 | 887 | IPR007502 | GO:0004386 | |
Bpe11g01066 | 1035 | Pfam | Pectinesterase | 196 | 424 | IPR000070 | GO:0030599|GO:0042545 | |
Bpe11g01066 | 1035 | SMART | ultradead3 | 406 | 582 | IPR014001 | - | |
Bpe11g01066 | 1035 | Pfam | Plant invertase/pectin methylesterase inhibitor | 78 | 138 | IPR006501 | GO:0004857 | |
Bpe11g01066 | 1035 | Coils | Coil | 862 | 882 | - | - | |
Bpe11g01066 | 1035 | Gene3D | - | 168 | 407 | IPR012334 | - | |
Bpe11g01066 | 1035 | ProSiteProfiles | Superfamilies 1 and 2 helicase C-terminal domain profile. | 605 | 781 | IPR001650 | - | |
Bpe11g01066 | 1035 | CDD | PMEI-like_3 | 67 | 144 | - | - | |
Bpe11g01066 | 1035 | ProSitePatterns | DEAH-box subfamily ATP-dependent helicases signature. | 508 | 517 | IPR002464 | - | |
Bpe11g01066 | 1035 | Gene3D | - | 586 | 760 | IPR027417 | - | |
Bpe11g01066 | 1035 | CDD | SF2_C_RHA | 587 | 748 | - | - | |
Bpe11g01066 | 1035 | Gene3D | - | 420 | 584 | IPR027417 | - | |
Bpe11g01066 | 1035 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 444 | 909 | IPR027417 | - | |
Bpe11g01066 | 1035 | Gene3D | Invertase/pectin methylesterase inhibitor family protein | 65 | 144 | IPR035513 | - | |
Bpe11g01066 | 1035 | Pfam | Helicase conserved C-terminal domain | 613 | 739 | IPR001650 | - | |
Bpe11g01066 | 1035 | PANTHER | ATP-DEPENDENT RNA HELICASE | 426 | 1029 | - | - | |
Bpe11g01066 | 1035 | SMART | helicmild6 | 640 | 740 | IPR001650 | - | |
Bpe11g01066 | 1035 | ProSitePatterns | Pectinesterase signature 2. | 281 | 290 | IPR033131 | - | |
Bpe11g01066 | 1035 | SUPERFAMILY | Pectin lyase-like | 176 | 425 | IPR011050 | - | |
Bpe11g01066 | 1035 | Gene3D | - | 789 | 938 | - | - | |
Bpe11g01066 | 1035 | Pfam | Oligonucleotide/oligosaccharide-binding (OB)-fold | 944 | 1023 | IPR011709 | - | |
Bpe11g01066 | 1035 | SUPERFAMILY | Plant invertase/pectin methylesterase inhibitor | 76 | 143 | IPR035513 | - | |
Bpe11g01066 | 1035 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 424 | 566 | IPR014001 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe11g01066 | Bpe-Chr11:7995301 | Bpe13g00528 | Bpe-Chr13:12558610 | 1.11E-163 | dispersed | |
Bpe13g00524 | Bpe-Chr13:12532976 | Bpe11g01066 | Bpe-Chr11:7995301 | 3.90E-101 | dispersed | |
Bpe15g00249 | Bpe-Chr15:13802286 | Bpe11g01066 | Bpe-Chr11:7995301 | 1.29E-81 | dispersed | |
Bpe03g01191 | Bpe-Chr3:30809385 | Bpe11g01066 | Bpe-Chr11:7995301 | 8.62E-74 | transposed | |
Bpe11g01066 | Bpe-Chr11:7995301 | Bpe02g01000 | Bpe-Chr2:9977321 | 1.31E-21 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe11g01066 | K13117 | - | qsu:112019177 | 996.112 |