Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g01077 ATGAAGTGTGTATTAGCAGGAGAGTTGTATTTTAGAGATAGAGAGAGAAAGTTAATGATGAATTGGTGCGTAGGATTGAAGCCTGTTTTTGCAATGTTGGCTGTGAATTTTGCTCTTGCTCTTGTGAATGTGTCTCTAAAAAAGATTCTTAACGACGGGATGAAGGATTTGATCATAATTGCGTATCGACAATCGATTTCGGCTATGTTTTTGGCACCCATCGCCTATTTTCTCGAGAGGAAAAGTCGACCTAGCATTACACTATGCGTCTTGTGTCATCTCTTCTTTGGTGCTTTAATCGGGGCAACTTTGACACTATATTTGTTCCTCCTTGGACTTAAATACACATCTGCAACTTTCTCGTGTGCCTTCATCAACATGGTGCCGGTAAATACGTTCATTCTAGCACTACTATTCGGAATCGAGAAAATTAACATGAAAAGTAAAGGAGGGAGAGCCAAGATGGTAGGAGCTCTAGTGTGCATTGGTGGAGCTTTGATCTTGATCTTTTACAAAGGAATTTCAATAAACAACACCAGGGCAGAAATTCACCAGGCAAACGAATTGGAAGTGAAGATTTCGGCTAAGAGGTGGACATTCGGATCGCTATTGCTGACTACAGGCTGCCTCTGTTGGTCTTCATGGTTCCTTATGCAATCAAAGATTGGGAGGATGTACCCATGTCAATATTCCAGCACCACAATCTTGTCTTTTTTCAGTGCCATCCAATCAGCCATTTTAAGTTTGGCCATTGACAGGAACATCTCCATTTGGGTTTTGAAAGGCAAATTAGAGATTCTCAGCCTTGTATATACTGGGATAGTGGGATCGGGGCTGTGCTATGTGGGAATGTCATGGAGTGTGAAAGAGAAAGGCCCAGTCTTCACTGCAGCATTTACACCCTTCATACAGATCTTTGCAGCCTTGTTTGATTTCTCCATTTTGCATGAACAAATTTACCTTGGAAGTGTCGTGGGATCGGTGGTAATCATATGTGGAATGTACATCCTTTTGTGGGGTAAAAACATCGAAGTCAAAGAATGCAAGAGCCAAGCCACTGGAAGGCAACCAAAGCAAACCGAACTCGACCAAATATAA 1098 41.89 MKCVLAGELYFRDRERKLMMNWCVGLKPVFAMLAVNFALALVNVSLKKILNDGMKDLIIIAYRQSISAMFLAPIAYFLERKSRPSITLCVLCHLFFGALIGATLTLYLFLLGLKYTSATFSCAFINMVPVNTFILALLFGIEKINMKSKGGRAKMVGALVCIGGALILIFYKGISINNTRAEIHQANELEVKISAKRWTFGSLLLTTGCLCWSSWFLMQSKIGRMYPCQYSSTTILSFFSAIQSAILSLAIDRNISIWVLKGKLEILSLVYTGIVGSGLCYVGMSWSVKEKGPVFTAAFTPFIQIFAALFDFSILHEQIYLGSVVGSVVIICGMYILLWGKNIEVKECKSQATGRQPKQTELDQI 365
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 8086516 8088542 + Bpe004402.1 Bpe11g01077 111222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g01077 365 SUPERFAMILY Multidrug resistance efflux transporter EmrE 62 171 - -
Bpe11g01077 365 Pfam EamA-like transporter family 200 338 IPR000620 GO:0016020|GO:0016021
Bpe11g01077 365 Pfam EamA-like transporter family 27 169 IPR000620 GO:0016020|GO:0016021
Bpe11g01077 365 PANTHER WAT1-RELATED PROTEIN 28 356 - -
Bpe11g01077 365 SUPERFAMILY Multidrug resistance efflux transporter EmrE 263 342 - -
Bpe11g01077 365 PANTHER WAT1-RELATED PROTEIN 28 356 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe08g00917 Bpe-Chr8:11610769 Bpe11g01077 Bpe-Chr11:8086516 1.41E-127 dispersed
Bpe11g00234 Bpe-Chr11:1567700 Bpe11g01077 Bpe-Chr11:8086516 4.14E-82 dispersed
Bpe11g01077 Bpe-Chr11:8086516 Bpe04g00799 Bpe-Chr4:5242708 3.99E-69 dispersed
Bpe11g01077 Bpe-Chr11:8086516 Bpe02g00369 Bpe-Chr2:2430454 5.17E-69 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g01077 - - qsu:112038308 419.853