Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe11g01078 | ACCAAGGGAGAGATATCTAAGATGTTTGAGGTAAGCTACGACCCTGCAGTGAATTCTAACCAAACTTCCATGAGTAGTGAAAGCTGTAGCGGCTTTAGCTGTCTTTCCTTTGACGTCGCTATCGATTTAGCGACTATTCGCTCCTCGCCAGAAAGAATGAGGCTCAAGCCTCACCGATCATCAGACTTGGCATACTCCGCCATTCGTATCCGTAAAATGAAGCCTACCTTCCGTGATTTTCAGCTCGTTCGACGAATTGGCTCCGGAGATATTGGCACGGTCTATCTCTGTCGATTATGGAACTCGAGTATCGGCGATGAAGACGATCCTTGTCTTTACGCCATGAAAGTGGTAGACAAAGAAGCGTTGGCGCTGAAGAACAAAGTGCAGAGGGCAGAGATGGAGAGGAAGATTTTAAAGACGCTAGATCATCCTTTTCTTCCTCTACTCTACGCTGAGTTTGATGCCTCTCGGTTCTCTTGTATCGTCATGGAATTTTGCTCGGGCGGTGATTTGCATTCCCTCATGCATAAGCAGCCGCTGAAGTGCTTTTCTCTGAATTCAGCCAGGTTTTACGCTGCGGAGGTTTTAATGGCGCTAGAGTATCTGCACATGCTAGGCATTATCTACAGAGACCTGAAGCCGGAAAACGTGCTGATCAAATCAGACGGTCACATCATGCTCTCGGATTTTGACCTCTCGCTCTGCTCTGAAGCAATCCCAGCTGTTGAAACCCCCGACTCCACTCCGGATCCTGCAATGACACCAAAGTTCTGCACCCGCTCCCAGAGGATCATATCTTCCATCCCCACGGCGTTTCCTTGCCTTCGAAACCGGCTATTCCGGTCGAGAAAGGTCCAGACATTAACCCCAAACCGCCTCTTTGTGGCGGAGCCGACGACAGCCCGATCTTGTTCCTTTGTTGGGACCCACGAATACGTATCGCCAGAAGTCGCCTCCGGTGGGTCCCATGGTAACGCCGTTGATTGGTGGGCCTTCGGGATCTTCGTCTACGAAATGATCTACGGCCGCACCCCGTTTGCAGCGCGATCGAACGAAATGACACTGACCAACATCATTAAAGAACCCCTAACGTTCCCCACCCCCATGCCCAAGAGTGCGCTTGAATTGCACGCCCGCGACCTCATCTCCGCCTTGCTGAACAAGGATCCGGACAGTCGACTCGGGTCGAAACGCGGATCGAGCGACGTGAAGAAGCACCCGTTCTTCAAAGGCTTGAACTTCGCCCTTCTTCGGTCCCTCAAGCCGCCGGAGATTCCTCGCCCGAAAAGGCAGAAAAGGACGTCCTCGCTTACCACGAAGACGAACGAGGAATCCACGGCGTTCGATTACTTCTAA | 1359 | 51.73 | TKGEISKMFEVSYDPAVNSNQTSMSSESCSGFSCLSFDVAIDLATIRSSPERMRLKPHRSSDLAYSAIRIRKMKPTFRDFQLVRRIGSGDIGTVYLCRLWNSSIGDEDDPCLYAMKVVDKEALALKNKVQRAEMERKILKTLDHPFLPLLYAEFDASRFSCIVMEFCSGGDLHSLMHKQPLKCFSLNSARFYAAEVLMALEYLHMLGIIYRDLKPENVLIKSDGHIMLSDFDLSLCSEAIPAVETPDSTPDPAMTPKFCTRSQRIISSIPTAFPCLRNRLFRSRKVQTLTPNRLFVAEPTTARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFVYEMIYGRTPFAARSNEMTLTNIIKEPLTFPTPMPKSALELHARDLISALLNKDPDSRLGSKRGSSDVKKHPFFKGLNFALLRSLKPPEIPRPKRQKRTSSLTTKTNEESTAFDYF | 452 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 8096133 | 8098097 | + | Bpe004403.1 | Bpe11g01078 | 111223 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe11g01078 | 452 | Gene3D | Transferase(Phosphotransferase) domain 1 | 167 | 235 | - | - | |
Bpe11g01078 | 452 | Gene3D | Phosphorylase Kinase; domain 1 | 78 | 166 | - | - | |
Bpe11g01078 | 452 | Gene3D | Transferase(Phosphotransferase) domain 1 | 303 | 428 | - | - | |
Bpe11g01078 | 452 | Coils | Coil | 115 | 142 | - | - | |
Bpe11g01078 | 452 | SMART | serkin_6 | 80 | 410 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bpe11g01078 | 452 | SUPERFAMILY | Protein kinase-like (PK-like) | 58 | 438 | IPR011009 | - | |
Bpe11g01078 | 452 | PANTHER | FLIPPASE KINASE 1-RELATED | 10 | 443 | - | - | |
Bpe11g01078 | 452 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 208 | 220 | IPR008271 | GO:0004672|GO:0006468 | |
Bpe11g01078 | 452 | PANTHER | SERINE/THREONINE KINASE FAMILY PROTEIN | 10 | 443 | - | - | |
Bpe11g01078 | 452 | CDD | STKc_phototropin_like | 78 | 429 | - | - | |
Bpe11g01078 | 452 | Pfam | Protein kinase domain | 81 | 235 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bpe11g01078 | 452 | Pfam | Protein kinase domain | 304 | 410 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bpe11g01078 | 452 | MobiDBLite | consensus disorder prediction | 422 | 452 | - | - | |
Bpe11g01078 | 452 | Gene3D | Phosphorylase Kinase; domain 1 | 429 | 445 | - | - | |
Bpe11g01078 | 452 | ProSiteProfiles | Protein kinase domain profile. | 80 | 410 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe03g00862 | Bpe-Chr3:28409099 | Bpe11g01078 | Bpe-Chr11:8096133 | 4.03E-117 | dispersed | |
Bpe11g01078 | Bpe-Chr11:8096133 | Bpe02g02039 | Bpe-Chr2:21985788 | 2.60E-131 | dispersed | |
Bpe11g01078 | Bpe-Chr11:8096133 | Bpe03g00751 | Bpe-Chr3:27571401 | 7.78E-130 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
63582 | PF00069 | Pkinase | 3.30E-33 | CL0016 | Bpe | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe11g01078 | - | - | csv:101208129 | 634.409 |