Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g01078 ACCAAGGGAGAGATATCTAAGATGTTTGAGGTAAGCTACGACCCTGCAGTGAATTCTAACCAAACTTCCATGAGTAGTGAAAGCTGTAGCGGCTTTAGCTGTCTTTCCTTTGACGTCGCTATCGATTTAGCGACTATTCGCTCCTCGCCAGAAAGAATGAGGCTCAAGCCTCACCGATCATCAGACTTGGCATACTCCGCCATTCGTATCCGTAAAATGAAGCCTACCTTCCGTGATTTTCAGCTCGTTCGACGAATTGGCTCCGGAGATATTGGCACGGTCTATCTCTGTCGATTATGGAACTCGAGTATCGGCGATGAAGACGATCCTTGTCTTTACGCCATGAAAGTGGTAGACAAAGAAGCGTTGGCGCTGAAGAACAAAGTGCAGAGGGCAGAGATGGAGAGGAAGATTTTAAAGACGCTAGATCATCCTTTTCTTCCTCTACTCTACGCTGAGTTTGATGCCTCTCGGTTCTCTTGTATCGTCATGGAATTTTGCTCGGGCGGTGATTTGCATTCCCTCATGCATAAGCAGCCGCTGAAGTGCTTTTCTCTGAATTCAGCCAGGTTTTACGCTGCGGAGGTTTTAATGGCGCTAGAGTATCTGCACATGCTAGGCATTATCTACAGAGACCTGAAGCCGGAAAACGTGCTGATCAAATCAGACGGTCACATCATGCTCTCGGATTTTGACCTCTCGCTCTGCTCTGAAGCAATCCCAGCTGTTGAAACCCCCGACTCCACTCCGGATCCTGCAATGACACCAAAGTTCTGCACCCGCTCCCAGAGGATCATATCTTCCATCCCCACGGCGTTTCCTTGCCTTCGAAACCGGCTATTCCGGTCGAGAAAGGTCCAGACATTAACCCCAAACCGCCTCTTTGTGGCGGAGCCGACGACAGCCCGATCTTGTTCCTTTGTTGGGACCCACGAATACGTATCGCCAGAAGTCGCCTCCGGTGGGTCCCATGGTAACGCCGTTGATTGGTGGGCCTTCGGGATCTTCGTCTACGAAATGATCTACGGCCGCACCCCGTTTGCAGCGCGATCGAACGAAATGACACTGACCAACATCATTAAAGAACCCCTAACGTTCCCCACCCCCATGCCCAAGAGTGCGCTTGAATTGCACGCCCGCGACCTCATCTCCGCCTTGCTGAACAAGGATCCGGACAGTCGACTCGGGTCGAAACGCGGATCGAGCGACGTGAAGAAGCACCCGTTCTTCAAAGGCTTGAACTTCGCCCTTCTTCGGTCCCTCAAGCCGCCGGAGATTCCTCGCCCGAAAAGGCAGAAAAGGACGTCCTCGCTTACCACGAAGACGAACGAGGAATCCACGGCGTTCGATTACTTCTAA 1359 51.73 TKGEISKMFEVSYDPAVNSNQTSMSSESCSGFSCLSFDVAIDLATIRSSPERMRLKPHRSSDLAYSAIRIRKMKPTFRDFQLVRRIGSGDIGTVYLCRLWNSSIGDEDDPCLYAMKVVDKEALALKNKVQRAEMERKILKTLDHPFLPLLYAEFDASRFSCIVMEFCSGGDLHSLMHKQPLKCFSLNSARFYAAEVLMALEYLHMLGIIYRDLKPENVLIKSDGHIMLSDFDLSLCSEAIPAVETPDSTPDPAMTPKFCTRSQRIISSIPTAFPCLRNRLFRSRKVQTLTPNRLFVAEPTTARSCSFVGTHEYVSPEVASGGSHGNAVDWWAFGIFVYEMIYGRTPFAARSNEMTLTNIIKEPLTFPTPMPKSALELHARDLISALLNKDPDSRLGSKRGSSDVKKHPFFKGLNFALLRSLKPPEIPRPKRQKRTSSLTTKTNEESTAFDYF 452
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 8096133 8098097 + Bpe004403.1 Bpe11g01078 111223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g01078 452 Gene3D Transferase(Phosphotransferase) domain 1 167 235 - -
Bpe11g01078 452 Gene3D Phosphorylase Kinase; domain 1 78 166 - -
Bpe11g01078 452 Gene3D Transferase(Phosphotransferase) domain 1 303 428 - -
Bpe11g01078 452 Coils Coil 115 142 - -
Bpe11g01078 452 SMART serkin_6 80 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe11g01078 452 SUPERFAMILY Protein kinase-like (PK-like) 58 438 IPR011009 -
Bpe11g01078 452 PANTHER FLIPPASE KINASE 1-RELATED 10 443 - -
Bpe11g01078 452 ProSitePatterns Serine/Threonine protein kinases active-site signature. 208 220 IPR008271 GO:0004672|GO:0006468
Bpe11g01078 452 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 10 443 - -
Bpe11g01078 452 CDD STKc_phototropin_like 78 429 - -
Bpe11g01078 452 Pfam Protein kinase domain 81 235 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe11g01078 452 Pfam Protein kinase domain 304 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe11g01078 452 MobiDBLite consensus disorder prediction 422 452 - -
Bpe11g01078 452 Gene3D Phosphorylase Kinase; domain 1 429 445 - -
Bpe11g01078 452 ProSiteProfiles Protein kinase domain profile. 80 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe03g00862 Bpe-Chr3:28409099 Bpe11g01078 Bpe-Chr11:8096133 4.03E-117 dispersed
Bpe11g01078 Bpe-Chr11:8096133 Bpe02g02039 Bpe-Chr2:21985788 2.60E-131 dispersed
Bpe11g01078 Bpe-Chr11:8096133 Bpe03g00751 Bpe-Chr3:27571401 7.78E-130 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63582 PF00069 Pkinase 3.30E-33 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g01078 - - csv:101208129 634.409