Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g01082 ATGAGGCTTTCTTCAGCTGGTTGTAGTCCTCGATCCCGTGAAGGAGAGAATAAGGTCTTAAATTCTGAGCTATGGCATGCTTGTGCTGGTCCTCTGGTTTCTCTACCTGCAATAGGAAATAGAGTTGTGTATTTTGCTCAAGGTCATAGTGAACAAGTTACTGCCTCAACGAACAAGGCAGTGGACACACATATCCCAAACTATCCGAGCTTACCACCTCAACTTATTTGCCAACTTCACAATGTGACTATGCATGCAGATCTTGAGACAGATGAAGTGTACGCTCAAATGACATTGCAGCCGCTAAGTCAACAAGAGCAAAAGGAAACTTACCTTCCAGCTGAGTTGGGTGCTCCTAGTAAACAACCCACAAATTATTTTTGCAAAACCTTAACTGCGAGTGATACGAGTACTCATGGAGGTTTCTCTGTTCCTCGCCGGGCGGCTGAAAAAGTGTTTCCTCCATTGGATTTCTCTCAGCAGCCCCCTGCTCAAGAATTAATGGCCAGGGATCTTCATGACAATGAATGGAAATTTAGACATATATTTCGTGGGCAACCTAAAAGGCATCTCCTTACCACTGGATGGAGTGTTTTTGTGAGTGCTAAAAGGCTTGTTGCTGGAGATTCTGTGATCTTCATCTGGAATGAAAAGAATCAATTACTCCTTGGCATTCGACGCGCTAATCGACCGCAAACGATGATGCCTTCTTCAGTTTTATCATGTGATAGCATGCATTTGGGCCTTCTTGCTGCTGCCGCTCATGCAGCCGCAACAAATAGTCGATTCACCATATTTTATAACCCAAGGGCAAGCCCAACTGAATTTGTAATACCGTTTACCAACTACGTAAAGGCAGTCTACAACACTCGTGTTTCTGTTGGAATGCGGTTTAGGATGATGTTCGAAACGGAAGAATCAAGTGTTCGTCGCTATATGGGTACGATTACCGGGATTAGTGACTCGGATCCGCGGTGGGCAAATTCACATTGGCGCTCGGTCAAGGTTGGATGGGACGAGTCAACTGCAGGAGAGAAGCAGCCAAGAGTGTCGTTGTGGGAGATTGAACCATTGACGACGTTCCCAATGTATCCTCCTCCGTTTTCCCTTCGGCTAAAGCGGCCATGGCCTGCTGGTTTACCCTCCTTCAATGGAATCAAAGAAAATGATCTGGGAATGAATTCTACCCACTTGTGGCTAGGTGGAGATAATGAATCTCGGAACTTTAATGGAGTTTCGCCATGGATGCAACCGAGGCTTGATTCTTCCATGCTCGGTCTGCAATCTGATGTGTATCAATCCATAGCTGCTTCTGCAGCACTGGAGAAGATGAAGATGATAAACCCATCCAAATTACCTTTCCAATTTCAATATTCTCCTCAAGCTCATCTGACCTTCCATCCGAACACGGCAGAAAATGGACCTCATCAGGCCTTCCTTCCAACTATGGTGAAAAACGGACCTGATTCTCAACCCAAGATTCAAACTCGGCCTCAAATTTTTCAGCAAAAATTACAGATTCCTAATGAAAGATTGGGGACTGATTCTTATCATGGTATATTGAGTTCATTTCCTCCAAATGAAGATGATTCATCTCATCTACTGATGAACCTTCAAAGAAATAACGGTCTGATTCCTTCTTCAACTTGGCCTTCTAAGCGGGCTGCTCTCGATCCTCTATTTCCATTTTTACTTCCTCAAGTAGAAGAAGAACATTTGGTGTCATTGCCACCATTTCCGGGTCGAGAGTGCTCGATCAATCAACAGAACCATCTTCTTTATGGTTTGAATATCGAACCAAAAGGTTCACCATTTTGTTCTAATTTCATGGCTTCCAATAGTAGTGATTACCCAGATAATGGAGTAATAACACCTTCCACTTCCATTGACAATCCGGGATTCTTGTCTGCAAAAAACATGTCCCAAGAAGTCAACCCGTCATCCAGAAACTTCGTTAAGGTTTATAAATCAGGGTCCTTTGGTAGATCATTGGACATTACCAAGTTTAATAGCTACCACGCGCTACACAGTGAGCTCGCTCAAATGTTCAGCTTGGATAGCATGTTGGAGGACCCTCTGAGATCAGGCTGGCAGCTTGTATTCGTTGATCAGGAGAATGAAATTCTTCTTCTCGGTGATGAGCCGTGGCCGGAGTTCGTGAATCACGTGTGGTGTATAAAAATATTTTCGCCTCAAGAAGTGCTCGAAATGGGAAAAGACGGCGCAAAGCTTTTGAATACAGCATCAGTTCAGAGGCTCTCAGTTGGAAGTTGCGATGAGAATGTGATCGGACAAAATTCGAGAAATGTGAGCAGCGTAATAACTTCCGGTGGGTCCGTCGACAACTGA 2349 44.32 MRLSSAGCSPRSREGENKVLNSELWHACAGPLVSLPAIGNRVVYFAQGHSEQVTASTNKAVDTHIPNYPSLPPQLICQLHNVTMHADLETDEVYAQMTLQPLSQQEQKETYLPAELGAPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELMARDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVIFIWNEKNQLLLGIRRANRPQTMMPSSVLSCDSMHLGLLAAAAHAAATNSRFTIFYNPRASPTEFVIPFTNYVKAVYNTRVSVGMRFRMMFETEESSVRRYMGTITGISDSDPRWANSHWRSVKVGWDESTAGEKQPRVSLWEIEPLTTFPMYPPPFSLRLKRPWPAGLPSFNGIKENDLGMNSTHLWLGGDNESRNFNGVSPWMQPRLDSSMLGLQSDVYQSIAASAALEKMKMINPSKLPFQFQYSPQAHLTFHPNTAENGPHQAFLPTMVKNGPDSQPKIQTRPQIFQQKLQIPNERLGTDSYHGILSSFPPNEDDSSHLLMNLQRNNGLIPSSTWPSKRAALDPLFPFLLPQVEEEHLVSLPPFPGRECSINQQNHLLYGLNIEPKGSPFCSNFMASNSSDYPDNGVITPSTSIDNPGFLSAKNMSQEVNPSSRNFVKVYKSGSFGRSLDITKFNSYHALHSELAQMFSLDSMLEDPLRSGWQLVFVDQENEILLLGDEPWPEFVNHVWCIKIFSPQEVLEMGKDGAKLLNTASVQRLSVGSCDENVIGQNSRNVSSVITSGGSVDN 782
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 8124146 8129767 + Bpe004407.1 Bpe11g01082 111227

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g01082 782 SMART B3_2 127 229 IPR003340 GO:0003677
Bpe11g01082 782 Pfam Auxin response factor 253 335 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Bpe11g01082 782 ProSiteProfiles B3 DNA-binding domain profile. 127 229 IPR003340 GO:0003677
Bpe11g01082 782 Gene3D - 291 362 - -
Bpe11g01082 782 SUPERFAMILY DNA-binding pseudobarrel domain 111 256 IPR015300 -
Bpe11g01082 782 Gene3D - 645 738 - -
Bpe11g01082 782 SUPERFAMILY CAD & PB1 domains 644 724 - -
Bpe11g01082 782 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 604 760 IPR044835 GO:0003677|GO:0006355|GO:0009725
Bpe11g01082 782 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 1 484 IPR044835 GO:0003677|GO:0006355|GO:0009725
Bpe11g01082 782 PANTHER AUXIN RESPONSE FACTOR 6 604 760 - -
Bpe11g01082 782 Pfam B3 DNA binding domain 127 228 IPR003340 GO:0003677
Bpe11g01082 782 Pfam AUX/IAA family 608 733 IPR033389 -
Bpe11g01082 782 CDD B3_DNA 126 227 IPR003340 GO:0003677
Bpe11g01082 782 Gene3D - 125 228 IPR015300 -
Bpe11g01082 782 PANTHER AUXIN RESPONSE FACTOR 6 1 484 - -
Bpe11g01082 782 ProSiteProfiles PB1 domain profile. 649 733 IPR000270 GO:0005515
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g01082 - - - nnu:104610814 1045.03
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe08g00619 Bpe-Chr8:5031688 Bpe11g01082 Bpe-Chr11:8124146 0 dispersed
Bpe11g01082 Bpe-Chr11:8124146 Bpe11g01233 Bpe-Chr11:9210760 0 dispersed
Bpe01g00841 Bpe-Chr1:15864973 Bpe11g01082 Bpe-Chr11:8124146 0 wgd
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Bpe02g01300 . 12 285 B3 DNA Binding Superfamily AT3G26790 53.7 7.2e-66 247.7
Bpe11g01690 BCT,CCT,ECH 1 370 B3 DNA Binding Superfamily AT1G25560 59.8 2.5e-110 395.6
Bpe10g00947 CCT,ECH 1 371 B3 DNA Binding Superfamily AT1G25560 59.3 8.8e-108 387.1
Bpe02g02282 BCT,CCT,ECH 1 343 B3 DNA Binding Superfamily AT1G25560 58.2 3.2e-102 368.6
Bpe08g00913 BCT 87 205 B3 DNA Binding Superfamily AT1G25560 61.4 9.6e-38 154.5
Bpe11g00381 BCT 94 214 B3 DNA Binding Superfamily AT1G25560 60.5 9.6e-38 154.5
Bpe04g01510 . 32 175 B3 DNA Binding Superfamily AT1G25560 51.9 1.4e-36 150.6
Bpe11g00381 BCT 93 344 B3 DNA Binding Superfamily AT1G01030 51.3 3.0e-57 219.2
Bpe04g00972 BCT 109 339 B3 DNA Binding Superfamily AT1G01030 53.2 8.6e-57 217.6
Bpe10g00947 CCT,ECH 191 325 B3 DNA Binding Superfamily AT1G01030 60.1 6.8e-38 154.8
Bpe11g01690 BCT,CCT,ECH 191 335 B3 DNA Binding Superfamily AT1G01030 54.7 6.8e-38 154.8
Bpe02g00791 BCT 14 666 B3 DNA Binding Superfamily AT4G30080 58.0 3.1e-207 718.4
Bpe04g00699 BCT 11 644 B3 DNA Binding Superfamily AT4G30080 57.7 3.1e-199 691.8
Bpe08g01418 . 1 740 B3 DNA Binding Superfamily AT2G30470 53.7 6.2e-199 691.0
Bpe15g00884 . 1 394 B3 DNA Binding Superfamily AT3G18990 52.7 4.4e-102 368.2
Bpe12g00069 . 374 753 B3 DNA Binding Superfamily AT3G18990 50.5 1.1e-92 337.0
Bpe05g01038 CCT,ECH 6 620 B3 DNA Binding Superfamily AT1G59750 52.0 3.1e-167 585.5
Bpe08g00619 CCT 23 383 B3 DNA Binding Superfamily AT1G59750 54.5 1.5e-105 380.6
Bpe01g00841 CCT 23 383 B3 DNA Binding Superfamily AT1G59750 54.0 9.8e-105 377.9
Bpe11g01233 . 13 373 B3 DNA Binding Superfamily AT1G59750 54.1 6.3e-104 375.2
Bpe13g01112 . 9 365 B3 DNA Binding Superfamily AT1G59750 52.1 9.5e-100 361.3
Bpe06g00495 . 97 432 B3 DNA Binding Superfamily AT1G59750 52.8 1.0e-98 357.8
Bpe04g00237 . 8 349 B3 DNA Binding Superfamily AT1G59750 52.5 3.0e-98 356.3
Bpe08g00725 . 17 356 B3 DNA Binding Superfamily AT1G59750 50.7 2.9e-88 323.2
Bpe02g00791 BCT 13 662 B3 DNA Binding Superfamily AT2G28350 55.7 5.6e-193 671.0
Bpe04g00699 BCT 9 644 B3 DNA Binding Superfamily AT2G28350 56.9 1.6e-192 669.5
Bpe15g01331 BCT,CCT 6 376 B3 DNA Binding Superfamily AT2G28350 59.7 7.3e-132 468.0
Bpe05g01038 CCT,ECH 2 617 B3 DNA Binding Superfamily AT2G46530 58.6 1.8e-180 629.4
Bpe04g00952 CCT,ECH 19 635 B3 DNA Binding Superfamily AT2G46530 55.1 1.6e-170 596.3
Bpe11g01233 . 4 357 B3 DNA Binding Superfamily AT2G46530 52.4 4.6e-96 349.0
Bpe08g00619 CCT 1 368 B3 DNA Binding Superfamily AT2G46530 50.4 5.1e-95 345.5
Bpe01g00841 CCT 5 368 B3 DNA Binding Superfamily AT2G46530 51.1 1.1e-94 344.4
Bpe02g00791 BCT 14 666 B3 DNA Binding Superfamily AT4G30080 58.0 3.1e-207 718.4
Bpe04g00699 BCT 11 644 B3 DNA Binding Superfamily AT4G30080 57.7 3.1e-199 691.8
Bpe05g01038 CCT,ECH 36 620 B3 DNA Binding Superfamily AT3G61830 57.0 2.3e-171 599.0
Bpe04g00952 CCT,ECH 55 636 B3 DNA Binding Superfamily AT3G61830 53.3 8.3e-158 553.9
Bpe11g01233 . 41 354 B3 DNA Binding Superfamily AT3G61830 52.4 4.2e-85 312.4
Bpe11g01082 . 51 366 B3 DNA Binding Superfamily AT3G61830 50.8 1.0e-83 307.8
Bpe08g00619 CCT 51 364 B3 DNA Binding Superfamily AT3G61830 52.4 1.8e-83 307.0
Bpe01g00841 CCT 51 364 B3 DNA Binding Superfamily AT3G61830 51.4 2.0e-82 303.5
Bpe04g00237 . 44 349 B3 DNA Binding Superfamily AT3G61830 50.6 2.2e-78 290.0
Bpe13g01112 . 1 1089 B3 DNA Binding Superfamily AT1G19220 60.7 0.0e+00 1105.1
Bpe11g01082 . 1 426 B3 DNA Binding Superfamily AT1G19220 62.2 2.4e-148 523.5
Bpe13g00184 . 5 316 B3 DNA Binding Superfamily AT1G19220 52.6 2.7e-91 334.0
Bpe05g01038 CCT,ECH 3 210 B3 DNA Binding Superfamily AT1G43950 55.8 1.2e-62 236.5
Bpe04g00952 CCT,ECH 22 228 B3 DNA Binding Superfamily AT1G43950 55.7 5.0e-61 231.1
Bpe01g00451 CCT 144 429 B3 DNA Binding Superfamily AT2G33860 67.8 1.6e-103 373.2
Bpe08g00399 CCT 145 453 B3 DNA Binding Superfamily AT2G33860 61.6 2.6e-101 365.9
Bpe08g00146 . 164 448 B3 DNA Binding Superfamily AT2G33860 58.0 8.5e-92 334.3
Bpe11g01233 . 117 348 B3 DNA Binding Superfamily AT2G33860 56.9 1.1e-72 270.8
Bpe01g00841 CCT 127 358 B3 DNA Binding Superfamily AT2G33860 57.3 1.7e-71 266.9
Bpe08g00619 CCT 127 358 B3 DNA Binding Superfamily AT2G33860 56.9 4.8e-71 265.4
Bpe04g00237 . 119 354 B3 DNA Binding Superfamily AT2G33860 55.1 3.8e-68 255.8
Bpe08g00725 . 89 320 B3 DNA Binding Superfamily AT2G33860 55.6 8.5e-68 254.6
Bpe13g01112 . 112 342 B3 DNA Binding Superfamily AT2G33860 53.7 1.5e-67 253.8
Bpe11g01082 . 127 357 B3 DNA Binding Superfamily AT2G33860 55.2 4.2e-67 252.3
Bpe05g01038 CCT,ECH 111 346 B3 DNA Binding Superfamily AT2G33860 53.6 1.4e-65 247.3
Bpe04g00952 CCT,ECH 130 356 B3 DNA Binding Superfamily AT2G33860 52.6 1.4e-62 237.3
Bpe08g00146 . 1 777 B3 DNA Binding Superfamily AT5G60450 57.3 1.1e-235 813.1
Bpe04g00237 . 10 899 B3 DNA Binding Superfamily AT1G19850 58.7 6.9e-271 930.2
Bpe05g01038 CCT,ECH 3 337 B3 DNA Binding Superfamily AT1G19850 50.1 8.0e-94 342.0
Bpe04g00952 CCT,ECH 17 356 B3 DNA Binding Superfamily AT1G19850 50.4 2.9e-91 333.6
Bpe08g00619 CCT 1 885 B3 DNA Binding Superfamily AT1G30330 69.0 0.0e+00 1196.4
Bpe01g00841 CCT 1 882 B3 DNA Binding Superfamily AT1G30330 66.8 0.0e+00 1158.7
Bpe11g01082 . 1 778 B3 DNA Binding Superfamily AT1G30330 58.7 4.8e-275 944.1
Bpe11g01233 . 5 799 B3 DNA Binding Superfamily AT1G30330 60.7 2.8e-259 891.7
Bpe05g01038 CCT,ECH 2 337 B3 DNA Binding Superfamily AT1G30330 52.6 4.5e-95 346.3
Bpe08g00146 . 54 412 B3 DNA Binding Superfamily AT1G30330 50.4 5.5e-93 339.3
Bpe04g00952 CCT,ECH 21 356 B3 DNA Binding Superfamily AT1G30330 52.0 2.5e-90 330.5
Bpe13g00184 . 1 310 B3 DNA Binding Superfamily AT1G30330 53.1 6.9e-88 322.4
Bpe13g01112 . 1 1076 B3 DNA Binding Superfamily AT5G20730 56.7 7.7e-299 1023.5
Bpe01g00841 CCT 4 463 B3 DNA Binding Superfamily AT5G20730 61.6 2.1e-155 547.0
Bpe08g00619 CCT 4 498 B3 DNA Binding Superfamily AT5G20730 58.0 4.0e-154 542.7
Bpe11g01233 . 5 473 B3 DNA Binding Superfamily AT5G20730 58.0 5.6e-148 522.3
Bpe11g01082 . 4 425 B3 DNA Binding Superfamily AT5G20730 61.3 7.1e-143 505.4
Bpe13g00184 . 1 308 B3 DNA Binding Superfamily AT5G20730 53.2 9.1e-90 328.9
Bpe11g01233 . 87 810 B3 DNA Binding Superfamily AT5G37020 65.3 2.6e-252 868.2
Bpe08g00619 CCT 97 844 B3 DNA Binding Superfamily AT5G37020 54.4 6.0e-201 697.6
Bpe01g00841 CCT 97 845 B3 DNA Binding Superfamily AT5G37020 53.3 1.4e-194 676.4
Bpe11g01082 . 97 741 B3 DNA Binding Superfamily AT5G37020 52.4 2.1e-177 619.4
Bpe13g01112 . 82 406 B3 DNA Binding Superfamily AT5G37020 61.3 7.8e-108 388.3
Bpe05g01038 CCT,ECH 111 337 B3 DNA Binding Superfamily AT5G37020 54.1 1.0e-67 255.0
Bpe04g00952 CCT,ECH 130 389 B3 DNA Binding Superfamily AT5G37020 50.8 1.0e-67 255.0
Bpe01g00451 CCT 134 375 B3 DNA Binding Superfamily AT5G37020 51.6 7.2e-61 232.3
Bpe05g01038 CCT,ECH 4 620 B3 DNA Binding Superfamily AT4G23980 54.3 9.5e-182 633.6
Bpe04g00952 CCT,ECH 25 658 B3 DNA Binding Superfamily AT4G23980 52.9 3.4e-171 598.6
Bpe13g00184 . 1 754 B3 DNA Binding Superfamily AT5G62000 62.5 1.3e-261 899.4
Bpe06g00495 . 94 432 B3 DNA Binding Superfamily AT5G62000 57.1 5.9e-110 395.6
Bpe13g01112 . 9 361 B3 DNA Binding Superfamily AT5G62000 52.1 2.6e-102 370.2
Bpe02g01300 . 12 285 B3 DNA Binding Superfamily AT3G26790 53.7 7.2e-66 247.7
Bpe08g01418 . 1 740 B3 DNA Binding Superfamily AT2G30470 53.7 6.2e-199 691.0
Bpe13g01112 . 1 1089 B3 DNA Binding Superfamily AT1G19220 60.7 0.0e+00 1105.1
Bpe11g01082 . 1 426 B3 DNA Binding Superfamily AT1G19220 62.2 2.4e-148 523.5
Bpe13g00184 . 5 316 B3 DNA Binding Superfamily AT1G19220 52.6 2.7e-91 334.0
Bpe04g00237 . 10 899 B3 DNA Binding Superfamily AT1G19850 58.7 6.9e-271 930.2
Bpe05g01038 CCT,ECH 3 337 B3 DNA Binding Superfamily AT1G19850 50.1 8.0e-94 342.0
Bpe04g00952 CCT,ECH 17 356 B3 DNA Binding Superfamily AT1G19850 50.4 2.9e-91 333.6
Bpe08g00619 CCT 1 885 B3 DNA Binding Superfamily AT1G30330 69.0 0.0e+00 1196.4
Bpe01g00841 CCT 1 882 B3 DNA Binding Superfamily AT1G30330 66.8 0.0e+00 1158.7
Bpe11g01082 . 1 778 B3 DNA Binding Superfamily AT1G30330 58.7 4.8e-275 944.1
Bpe11g01233 . 5 799 B3 DNA Binding Superfamily AT1G30330 60.7 2.8e-259 891.7
Bpe05g01038 CCT,ECH 2 337 B3 DNA Binding Superfamily AT1G30330 52.6 4.5e-95 346.3
Bpe08g00146 . 54 412 B3 DNA Binding Superfamily AT1G30330 50.4 5.5e-93 339.3
Bpe04g00952 CCT,ECH 21 356 B3 DNA Binding Superfamily AT1G30330 52.0 2.5e-90 330.5
Bpe13g00184 . 1 310 B3 DNA Binding Superfamily AT1G30330 53.1 6.9e-88 322.4
Bpe13g01112 . 1 1076 B3 DNA Binding Superfamily AT5G20730 56.7 7.7e-299 1023.5
Bpe01g00841 CCT 4 463 B3 DNA Binding Superfamily AT5G20730 61.6 2.1e-155 547.0
Bpe08g00619 CCT 4 498 B3 DNA Binding Superfamily AT5G20730 58.0 4.0e-154 542.7
Bpe11g01233 . 5 473 B3 DNA Binding Superfamily AT5G20730 58.0 5.6e-148 522.3
Bpe11g01082 . 4 425 B3 DNA Binding Superfamily AT5G20730 61.3 7.1e-143 505.4
Bpe13g00184 . 1 308 B3 DNA Binding Superfamily AT5G20730 53.2 9.1e-90 328.9
Bpe11g01233 . 87 810 B3 DNA Binding Superfamily AT5G37020 65.3 2.6e-252 868.2
Bpe08g00619 CCT 97 844 B3 DNA Binding Superfamily AT5G37020 54.4 6.0e-201 697.6
Bpe01g00841 CCT 97 845 B3 DNA Binding Superfamily AT5G37020 53.3 1.4e-194 676.4
Bpe11g01082 . 97 741 B3 DNA Binding Superfamily AT5G37020 52.4 2.1e-177 619.4
Bpe13g01112 . 82 406 B3 DNA Binding Superfamily AT5G37020 61.3 7.8e-108 388.3
Bpe05g01038 CCT,ECH 111 337 B3 DNA Binding Superfamily AT5G37020 54.1 1.0e-67 255.0
Bpe04g00952 CCT,ECH 130 389 B3 DNA Binding Superfamily AT5G37020 50.8 1.0e-67 255.0
Bpe01g00451 CCT 134 375 B3 DNA Binding Superfamily AT5G37020 51.6 7.2e-61 232.3
Bpe01g00451 CCT 144 429 B3 DNA Binding Superfamily AT2G33860 67.8 1.6e-103 373.2
Bpe08g00399 CCT 145 453 B3 DNA Binding Superfamily AT2G33860 61.6 2.6e-101 365.9
Bpe08g00146 . 164 448 B3 DNA Binding Superfamily AT2G33860 58.0 8.5e-92 334.3
Bpe11g01233 . 117 348 B3 DNA Binding Superfamily AT2G33860 56.9 1.1e-72 270.8
Bpe01g00841 CCT 127 358 B3 DNA Binding Superfamily AT2G33860 57.3 1.7e-71 266.9
Bpe08g00619 CCT 127 358 B3 DNA Binding Superfamily AT2G33860 56.9 4.8e-71 265.4
Bpe04g00237 . 119 354 B3 DNA Binding Superfamily AT2G33860 55.1 3.8e-68 255.8
Bpe08g00725 . 89 320 B3 DNA Binding Superfamily AT2G33860 55.6 8.5e-68 254.6
Bpe13g01112 . 112 342 B3 DNA Binding Superfamily AT2G33860 53.7 1.5e-67 253.8
Bpe11g01082 . 127 357 B3 DNA Binding Superfamily AT2G33860 55.2 4.2e-67 252.3
Bpe05g01038 CCT,ECH 111 346 B3 DNA Binding Superfamily AT2G33860 53.6 1.4e-65 247.3
Bpe04g00952 CCT,ECH 130 356 B3 DNA Binding Superfamily AT2G33860 52.6 1.4e-62 237.3
Bpe08g00146 . 1 777 B3 DNA Binding Superfamily AT5G60450 57.3 1.1e-235 813.1
Bpe05g01038 CCT,ECH 6 620 B3 DNA Binding Superfamily AT1G59750 52.0 3.1e-167 585.5
Bpe08g00619 CCT 23 383 B3 DNA Binding Superfamily AT1G59750 54.5 1.5e-105 380.6
Bpe01g00841 CCT 23 383 B3 DNA Binding Superfamily AT1G59750 54.0 9.8e-105 377.9
Bpe11g01233 . 13 373 B3 DNA Binding Superfamily AT1G59750 54.1 6.3e-104 375.2
Bpe13g01112 . 9 365 B3 DNA Binding Superfamily AT1G59750 52.1 9.5e-100 361.3
Bpe06g00495 . 97 432 B3 DNA Binding Superfamily AT1G59750 52.8 1.0e-98 357.8
Bpe04g00237 . 8 349 B3 DNA Binding Superfamily AT1G59750 52.5 3.0e-98 356.3
Bpe08g00725 . 17 356 B3 DNA Binding Superfamily AT1G59750 50.7 2.9e-88 323.2
Bpe13g00184 . 1 754 B3 DNA Binding Superfamily AT5G62000 62.5 1.3e-261 899.4
Bpe06g00495 . 94 432 B3 DNA Binding Superfamily AT5G62000 57.1 5.9e-110 395.6
Bpe13g01112 . 9 361 B3 DNA Binding Superfamily AT5G62000 52.1 2.6e-102 370.2
Bpe05g01038 CCT,ECH 2 617 B3 DNA Binding Superfamily AT2G46530 58.6 1.8e-180 629.4
Bpe04g00952 CCT,ECH 19 635 B3 DNA Binding Superfamily AT2G46530 55.1 1.6e-170 596.3
Bpe11g01233 . 4 357 B3 DNA Binding Superfamily AT2G46530 52.4 4.6e-96 349.0
Bpe08g00619 CCT 1 368 B3 DNA Binding Superfamily AT2G46530 50.4 5.1e-95 345.5
Bpe01g00841 CCT 5 368 B3 DNA Binding Superfamily AT2G46530 51.1 1.1e-94 344.4
Bpe05g01038 CCT,ECH 36 620 B3 DNA Binding Superfamily AT3G61830 57.0 2.3e-171 599.0
Bpe04g00952 CCT,ECH 55 636 B3 DNA Binding Superfamily AT3G61830 53.3 8.3e-158 553.9
Bpe11g01233 . 41 354 B3 DNA Binding Superfamily AT3G61830 52.4 4.2e-85 312.4
Bpe11g01082 . 51 366 B3 DNA Binding Superfamily AT3G61830 50.8 1.0e-83 307.8
Bpe08g00619 CCT 51 364 B3 DNA Binding Superfamily AT3G61830 52.4 1.8e-83 307.0
Bpe01g00841 CCT 51 364 B3 DNA Binding Superfamily AT3G61830 51.4 2.0e-82 303.5
Bpe04g00237 . 44 349 B3 DNA Binding Superfamily AT3G61830 50.6 2.2e-78 290.0
Bpe05g01038 CCT,ECH 4 620 B3 DNA Binding Superfamily AT4G23980 54.3 9.5e-182 633.6
Bpe04g00952 CCT,ECH 25 658 B3 DNA Binding Superfamily AT4G23980 52.9 3.4e-171 598.6
Bpe05g01038 CCT,ECH 3 210 B3 DNA Binding Superfamily AT1G43950 55.8 1.2e-62 236.5
Bpe04g00952 CCT,ECH 22 228 B3 DNA Binding Superfamily AT1G43950 55.7 5.0e-61 231.1
Bpe02g00791 BCT 13 662 B3 DNA Binding Superfamily AT2G28350 55.7 5.6e-193 671.0
Bpe04g00699 BCT 9 644 B3 DNA Binding Superfamily AT2G28350 56.9 1.6e-192 669.5
Bpe15g01331 BCT,CCT 6 376 B3 DNA Binding Superfamily AT2G28350 59.7 7.3e-132 468.0
Bpe02g00791 BCT 14 666 B3 DNA Binding Superfamily AT4G30080 58.0 3.1e-207 718.4
Bpe04g00699 BCT 11 644 B3 DNA Binding Superfamily AT4G30080 57.7 3.1e-199 691.8
Bpe11g00381 BCT 93 344 B3 DNA Binding Superfamily AT1G01030 51.3 3.0e-57 219.2
Bpe04g00972 BCT 109 339 B3 DNA Binding Superfamily AT1G01030 53.2 8.6e-57 217.6
Bpe10g00947 CCT,ECH 191 325 B3 DNA Binding Superfamily AT1G01030 60.1 6.8e-38 154.8
Bpe11g01690 BCT,CCT,ECH 191 335 B3 DNA Binding Superfamily AT1G01030 54.7 6.8e-38 154.8
Bpe11g01690 BCT,CCT,ECH 1 370 B3 DNA Binding Superfamily AT1G25560 59.8 2.5e-110 395.6
Bpe10g00947 CCT,ECH 1 371 B3 DNA Binding Superfamily AT1G25560 59.3 8.8e-108 387.1
Bpe02g02282 BCT,CCT,ECH 1 343 B3 DNA Binding Superfamily AT1G25560 58.2 3.2e-102 368.6
Bpe08g00913 BCT 87 205 B3 DNA Binding Superfamily AT1G25560 61.4 9.6e-38 154.5
Bpe11g00381 BCT 94 214 B3 DNA Binding Superfamily AT1G25560 60.5 9.6e-38 154.5
Bpe04g01510 . 32 175 B3 DNA Binding Superfamily AT1G25560 51.9 1.4e-36 150.6
Bpe04g00184 . 7 218 B3 DNA Binding Superfamily AT3G19184 54.2 2.9e-53 205.7
Bpe04g00184 . 55 225 B3 DNA Binding Superfamily AT5G42700 59.5 4.3e-50 194.5
Bpe15g00884 . 1 394 B3 DNA Binding Superfamily AT3G18990 52.7 4.4e-102 368.2
Bpe12g00069 . 374 753 B3 DNA Binding Superfamily AT3G18990 50.5 1.1e-92 337.0
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001814 1 2 2 2 3 2 3 2 2 2 2 2 4 2 2 4 2 2 4 2 2 2 2 2 2 2 2 2 2 2 67
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22084 PF02309 AUX_IAA 1.90E-06 CL0072 Bpe TF
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bpe11g01082 Bpe_Chr11 FPKM 10.261093 10.753118 4.14522 4.099505 14.184594 14.30688 13.017012 1.756216 2.125141 2.110312
Bpe11g01082 Bpe_Chr00 FPKM 5.800543 8.049776 1.551022 1.650745 8.0168 7.248009 7.562355 4.504807 2.640547 2.260268