Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g01103 ATGGGCGCCGTCGAAGGCTACCGTATTGCGGGCGGGCCACTCGGAGAAGTCACCGATCCAATCTACCCAGGCGGTTCGTTCGACCCGTTGGGTCTGGCTGACGACCCAGAGGCATTCGCAGAGCTGAAAGTGAAGGAATTAAAGAATGGAAGGCTAGCCATGTTCTCCATGTTCGGATTCTTCGTTCAGGCCATCGTCACCGGAAAGGGACCTCTTGAAAATCTGGCCGACCATCTCGCCGACCCTGTCAACAACAATGCCTGGGCTTATGCCACCAACTTTGTTCCCGGAAAGTGA 297 55.56 MGAVEGYRIAGGPLGEVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 98
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 8262151 8262447 + Bpe004427.1 Bpe11g01103 111248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g01103 98 Pfam Chlorophyll A-B binding protein 1 64 IPR022796 -
Bpe11g01103 98 SUPERFAMILY Chlorophyll a-b binding protein 1 95 - -
Bpe11g01103 98 PANTHER CHLOROPHYLL A-B BINDING PROTEIN, CHLOROPLASTIC 1 98 - -
Bpe11g01103 98 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 98 IPR001344 GO:0009765|GO:0016020
Bpe11g01103 98 Gene3D Chlorophyll a/b binding protein domain 1 91 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe11g01103 Bpe-Chr11:8262151 Bpe14g00731 Bpe-Chr14:5674397 2.49E-61 dispersed
Bpe11g01102 Bpe-Chr11:8254009 Bpe11g01103 Bpe-Chr11:8262151 7.59E-68 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g01103 K08912 - ccaj:109815895 204.912