Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g01118 ATGGAGTCAAAGATCCCCGTCAGGTTCGGGTTAGGGAGGCAGTCGTCTTTGGCGCCGGACAAGCTCTTAGGAGAAACAGACGAGCTCGAAGACGCGGAAATGATAGATCCTGGCGTGAAACTTATGTATTTGGCTAATGAAGGCGATCTTGAAGGAATCTCGGAGCTTTTGGATTCTGGAACCGACGTCAATTTCCGCGATATTGATGGCCGGACGGCTCTCCATATTTCAGCATGTCAGGGATATTCTGACGTGGTTGATTTCTTGCTTCAAAGAGGAGCTGAGGTTGACCCTAAAGATCGCTGGGGTAGCACGCCTCTTGCAGATGCCATTCATTACAAAAACCATAATGTGATTCAGTTGTTGGAGATACATGGTGCAAAACACCTGATGGCTCCAATGCATGTAAACCATGCTCGTGAAGTACCCGAATATGAAATCGATCCGAAAGAGATTGATTTTACAAACAGTGTTGATATAAGCAAGGGAACATTTCGTATTGCATCATGGCGAGGCATAGAAGTTGCTGTAAAAACTTTTGAGGAGGATGTGATTGATGACGAGGATAAAGTGAGGGCATTTCGGGACGAGCTTGCACTTCTTCAGAAGTTGAGACATCCGAATGTTGTACAGTTTCTAGGTGCAGTGACTCAGAGTAGCCCAATGATGATTGTTACAGAATATTTACCCAAGGGAGATCTTTCCGAATTCTTGAAAAAGATTGGAGCATTAAAACCAATAGTAGCTGTTAGATTTGCCCTTGATATTGCCAGGGGAATGAGTTACTTGCATGAGAATAAGCCTGCACCAATAATTCACTGTGATCTTGAGCCTTCAAATATATTGCGGGATGACTCTGGGCAGTTGAAAGTCGCAGATTTTGGAATTAGCAAGCTGTTGACAGTTAAAGAAAATAAGCCTCTAACATGCCAAGTCACTTCCCGCCGATATGTTGCTCCAGAGGTTTTCAAAAATGATGGGTACGATACAAAGGTGGACGTGTTCTCATTTGCTTTAATTCTACAGGAGATGATCTTGAATTTGAAGCCTTATCTTCTGGATCTTAATTTGCTAAAACAGATGATTGAAGGCTGCCCACCATTTTCTGCTAAGAAAGAAAATGAAGTTCCAGAAGCATATGCTGCAGGAGAACGTCCACCTTTCAAAGCCCCGTCTAAACATTACGCTCATGGACTTAGAGAGCAGATTGAGGAGTGCTGGAAGGAGAATCCAGCCGACAGACCAACTTTTAGGCAGATAATAAGAAGGCTGGAATCCATCTCTTACAGTCTTGGTCACAAGAGGCGTTGGAAGGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAACCTGCACGTGTGGTTTGCATTAATATTCATGTTTTTATTCATATGA 1431 43.68 MESKIPVRFGLGRQSSLAPDKLLGETDELEDAEMIDPGVKLMYLANEGDLEGISELLDSGTDVNFRDIDGRTALHISACQGYSDVVDFLLQRGAEVDPKDRWGSTPLADAIHYKNHNVIQLLEIHGAKHLMAPMHVNHAREVPEYEIDPKEIDFTNSVDISKGTFRIASWRGIEVAVKTFEEDVIDDEDKVRAFRDELALLQKLRHPNVVQFLGAVTQSSPMMIVTEYLPKGDLSEFLKKIGALKPIVAVRFALDIARGMSYLHENKPAPIIHCDLEPSNILRDDSGQLKVADFGISKLLTVKENKPLTCQVTSRRYVAPEVFKNDGYDTKVDVFSFALILQEMILNLKPYLLDLNLLKQMIEGCPPFSAKKENEVPEAYAAGERPPFKAPSKHYAHGLREQIEECWKENPADRPTFRQIIRRLESISYSLGHKRRWKVSLSLSLSLSLSLSLSLSLSLSLNLHVWFALIFMFLFI 476
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 8348827 8352324 - Bpe004443.2 Bpe11g01118 111263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g01118 476 SUPERFAMILY Ankyrin repeat 40 129 IPR036770 -
Bpe11g01118 476 SUPERFAMILY Protein kinase-like (PK-like) 164 426 IPR011009 -
Bpe11g01118 476 Pfam Ankyrin repeats (3 copies) 41 127 IPR002110 GO:0005515
Bpe11g01118 476 ProSiteProfiles Protein kinase domain profile. 119 427 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe11g01118 476 Pfam Protein tyrosine and serine/threonine kinase 160 424 IPR001245 GO:0004672|GO:0006468
Bpe11g01118 476 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 9 445 - -
Bpe11g01118 476 PIRSF ILK 2 445 - -
Bpe11g01118 476 Gene3D - 24 149 IPR036770 -
Bpe11g01118 476 CDD STKc_MAP3K-like 160 424 - -
Bpe11g01118 476 SMART ANK_2a 102 131 IPR002110 GO:0005515
Bpe11g01118 476 SMART ANK_2a 69 98 IPR002110 GO:0005515
Bpe11g01118 476 SMART ANK_2a 37 65 IPR002110 GO:0005515
Bpe11g01118 476 Gene3D Transferase(Phosphotransferase) domain 1 230 442 - -
Bpe11g01118 476 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE ISOFORM X1 9 445 - -
Bpe11g01118 476 ProSiteProfiles Ankyrin repeat region circular profile. 69 101 - -
Bpe11g01118 476 ProSiteProfiles Ankyrin repeat profile. 69 101 IPR002110 GO:0005515
Bpe11g01118 476 Gene3D Phosphorylase Kinase; domain 1 150 229 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe10g00886 Bpe-Chr10:14610245 Bpe11g01118 Bpe-Chr11:8348827 1.22E-96 dispersed
Bpe11g01118 Bpe-Chr11:8348827 Bpe13g01399 Bpe-Chr13:19223914 4.12E-99 dispersed
Bpe12g00765 Bpe-Chr12:13164106 Bpe11g01118 Bpe-Chr11:8348827 3.31E-131 transposed
Bpe15g00080 Bpe-Chr15:8520551 Bpe11g01118 Bpe-Chr11:8348827 4.21E-135 transposed
Bpe11g01118 Bpe-Chr11:8348827 Bpe02g01072 Bpe-Chr2:13426461 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63583 PF07714 PK_Tyr_Ser-Thr 1.00E-48 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g01118 - - csv:101205123 657.136