Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g01123 ATGATGTCAAAATCGTACACCAATCTTTTAGATCTAGCTTCTGGTAATTTTCCAGTAATGGGTCGCGAGAAAAAGCGACTTTCTCGTGTGATGACTGTTCCTGGGATTATATCGGAGCTTGACGATGATCAGGCCAACAGTGTGACCTCAGACGTTCCATCTTCCATTTTTCAGGACCGTATAATTATTGTTGGCAATCAGCTTCCTGTAAAAGCTAAACGAAGACCAGATAATAAGGGTTGGAGTTTCAGCTGGGATGAGGATTCCTTGCTGTTACAGCTCAAGGATGGCTTACCTGAAGATATGGAGGTCTTATATGTTGGCTCTTTGAAAGTGGATGTAGATTCAAATGAGCAAGATGACGTTTCACAGATTTTATTGGAGAGGTTTAAGTGTGTTCCAGCTTTTTTACCTTCTGACATTTTGTCAAAGTTCTATCATGGATTTTGTAAGCAGCATTTATGGCCACTTTTCCATTATATGCTTCCTATTTCGGCTGATCATGGTGGACGATTTGATCGGTCTTTGTGGGAGGCGTATGTCGCAGCAAATAAGATTTTTTCGCAAAGGGTGATTGAAGTTATTAACCCAGATGATGACTACGTATGGATCCATGATTATCATTTAATGGTGCTTCCTACCTTCTTGAGGAGGAGGTTTAATAGATTGAGAATGGGATTTTTTCTTCACAGTCCATTTCCATCATCAGAGATATACCGGACTTTACCCGTGAGAGAAGAGATTCTCAAGGCTCTTTTAAATTCAGACCTGATTGGTTTCCACACTTTCGACTATGCTCGCCATTTCCTCTCTTGCTGTAGTCGGATGTTAGGATTAGAGTATCAATCAAAGAGAGGCTATATTGGTTTGGAATACTATGGTAGGACTGTAGGGATTAAAATCATGCCGGTTGGAATTCATATGGGCCAGATTGAGTCTGTGTTGAGACAGGCAGACAAGGAGTGGAGGTTAGGGGAGCTGAAACAACAGTTTGAAGGGAAAACTGTCTTGCTTGGAGTGGATGATATGGACATCTTTAAAGGTGTCAATCTGAAGTTGTTGGCAATGGAGCAAATGCTGAAACAGCATCCTAAGTGGCAGGGAAAGGCCGTGCTTGTGCAGATTGCAAATCCCGCTAGAGGAGGTGGAAAAGATCTAGTCGATATACAGGATGAAATTGAGGCTAGCTGCAAGAGAATTAACGACCGTTTTCGACAAAAAAATTACGAACCAATAATTTTCATCGATAGGCCAGTTTCTCTCAGTGAAAGAGCAGCTTATTACACCATCGCCGAGTGTGTGGTAGTCACAGCTGTGAGGGATGGAATGAATCTAACACCTTATGAGTATATTCTCTGCAGACAGGGAATTTCCGGATCAAATATTAACCCCGAATCGAGTGGGCCCAAGAAGAGCATGCTAGTGGCATCAGAGTTTCTCGGATGTTCTCCTTCACTGAGCGGTGCAATTCGAATCAATCCGTGGAATATTGAAACAACTGCTGAGGCGATGAATGAGGCAATATCAATGGCTGATGCTGAGAAGCACTTGCGCCATGAGAAGCATTATAGGTACATTAGTACCCATGATGTATCATACTGGTCGAAGAGTTTTTTCCAAGACATGGAGAGGACATGTAAGGACCATTTTAGAAAACGTTGCTGGGGAATTGGTTTGGGGTTTGGATTTAGAGTTGTTGCTCTAGATCCTAATTTCAGGAAATTATCCATTGATGTCATTGTGTCTGCATATTCAAAGTCGAAAAACAGGGCAATCTTATTGGATTATGATGGAACTGTCATGCCCCAAACGTCAATCAATAAGGCTCCAAGTCAGGAGGTCATCTCCATCATCAATACACTCTGCGGCGATGATAAAAATACTGTTTTTGTTGTCAGCGGAAGAGGAAGACAGAGTTTAAGCAGATGGTTTTCTTCATGTCAAAAGCTAGGAATTGCTTCTGAGCATGGCTATTTCATGAGGTGGTCTGCGGAGGACGATTGGGAAAATTGTGGCCAAACAACTGATTTTGATTGGATACAAATGGCTGAGCCTGTTATGCAATTATACACTGACGCAACAGATGGTTCATCTATTGAAACCAAGGAAAGTGCTCTGGTTTGGCACCATCAAGATGCAGATCCTGGTTTTGGGTCAAGTCAAGCCAAAGAACTGTTGGACCACCTTGAAAGCGTATTGGCCAATGAGCCAGTAACTGTTAAAAGCGGCCAATTCATCGTCGAAGTAAAGCCACAGGTAGAGATGTTTACTCGTTTTAATTCAGTTTCCTTTCCAAGAGTTATTGTTGGGACTGTTTTTTTTCTCTTTCAGGGTGTGAGTAAAGGTTCAGTTGCAGAAAAGATCTTCACATCCATGGCGGAAAATGGAAGACAGGCAGATTTCGTTCTTTGCATTGGTGATGATCGATCTGATGAAGACATGTTTGAGATCATCGAAAGCGCATTCAATAATGGAGTCCTCTCCTCTAAGACGCTTGTTTTTGCCTGCACAGTCGGACAAAAACCAAGCAAAGCAAAATACTATTTAGACGATACAACTGAGGTCTTAACAATGCTCGAGGCCTTGGCCGAAACTTCACGTTCTCCGTCCTCCTCAGCGTACTCCCCTTGA 2631 42.42 MMSKSYTNLLDLASGNFPVMGREKKRLSRVMTVPGIISELDDDQANSVTSDVPSSIFQDRIIIVGNQLPVKAKRRPDNKGWSFSWDEDSLLLQLKDGLPEDMEVLYVGSLKVDVDSNEQDDVSQILLERFKCVPAFLPSDILSKFYHGFCKQHLWPLFHYMLPISADHGGRFDRSLWEAYVAANKIFSQRVIEVINPDDDYVWIHDYHLMVLPTFLRRRFNRLRMGFFLHSPFPSSEIYRTLPVREEILKALLNSDLIGFHTFDYARHFLSCCSRMLGLEYQSKRGYIGLEYYGRTVGIKIMPVGIHMGQIESVLRQADKEWRLGELKQQFEGKTVLLGVDDMDIFKGVNLKLLAMEQMLKQHPKWQGKAVLVQIANPARGGGKDLVDIQDEIEASCKRINDRFRQKNYEPIIFIDRPVSLSERAAYYTIAECVVVTAVRDGMNLTPYEYILCRQGISGSNINPESSGPKKSMLVASEFLGCSPSLSGAIRINPWNIETTAEAMNEAISMADAEKHLRHEKHYRYISTHDVSYWSKSFFQDMERTCKDHFRKRCWGIGLGFGFRVVALDPNFRKLSIDVIVSAYSKSKNRAILLDYDGTVMPQTSINKAPSQEVISIINTLCGDDKNTVFVVSGRGRQSLSRWFSSCQKLGIASEHGYFMRWSAEDDWENCGQTTDFDWIQMAEPVMQLYTDATDGSSIETKESALVWHHQDADPGFGSSQAKELLDHLESVLANEPVTVKSGQFIVEVKPQVEMFTRFNSVSFPRVIVGTVFFLFQGVSKGSVAEKIFTSMAENGRQADFVLCIGDDRSDEDMFEIIESAFNNGVLSSKTLVFACTVGQKPSKAKYYLDDTTEVLTMLEALAETSRSPSSSAYSP 876
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 8382627 8386296 - Bpe004449.1 Bpe11g01123 111268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g01123 876 Gene3D Glycogen Phosphorylase B; 53 313 - -
Bpe11g01123 876 CDD GT20_TPS 60 543 IPR001830 GO:0003824|GO:0005992
Bpe11g01123 876 Pfam Trehalose-phosphatase 593 753 IPR003337 GO:0003824|GO:0005992
Bpe11g01123 876 Pfam Trehalose-phosphatase 777 852 IPR003337 GO:0003824|GO:0005992
Bpe11g01123 876 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 752 IPR001830 GO:0003824|GO:0005992
Bpe11g01123 876 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 776 873 IPR001830 GO:0003824|GO:0005992
Bpe11g01123 876 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 592 819 IPR006379 -
Bpe11g01123 876 Gene3D Glycogen Phosphorylase B; 314 527 - -
Bpe11g01123 876 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 59 547 - -
Bpe11g01123 876 Gene3D - 592 672 IPR023214 -
Bpe11g01123 876 Gene3D - 778 849 IPR023214 -
Bpe11g01123 876 Gene3D - 673 752 - -
Bpe11g01123 876 Pfam Glycosyltransferase family 20 60 543 IPR001830 GO:0003824|GO:0005992
Bpe11g01123 876 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 7-RELATED 1 752 - -
Bpe11g01123 876 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 7-RELATED 776 873 - -
Bpe11g01123 876 CDD HAD_TPP 591 855 - -
Bpe11g01123 876 SUPERFAMILY HAD-like 590 864 IPR036412 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe01g00867 Bpe-Chr1:18063930 Bpe11g01123 Bpe-Chr11:8382627 0 dispersed
Bpe05g00523 Bpe-Chr5:19422098 Bpe11g01123 Bpe-Chr11:8382627 0 dispersed
Bpe11g01123 Bpe-Chr11:8382627 Bpe11g01763 Bpe-Chr11:14021187 0 dispersed
Bpe11g01123 Bpe-Chr11:8382627 Bpe07g00231 Bpe-Chr7:1639176 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g01123 K16055 - rcu:8275177 1522.29