Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe11g01127 | ATGGCGGATTCGAGACCAAGAAGACTGAGAGGGCATACGGCGACTGCAACGTGCTGCATCGCCTCGAGGAACCGCCCTGGTCTAGTCGCTACTTCCGGTGAGGATGGCTGTGTTTGCTGGTTTGATATGCGATGCAAAGAGGCTGTATGCATTATGGATATTTCAAAGGAGCCTATTTCATCTCTTTGTTTCAAACAAGGGAATGAAGATATCATTTATGTATCGACTGGAAAAGAAGTCAAATCTTTTGATTTGCATCAGGTTACCTCATGGAAACCGTTGGAAACTTATAATTTCAATAAGGAGGAGATAAATCAGGTTGCATGTGGTTCCAAGTCTTCTTTTCTGGCTGCAGCTGATGATGGGGGTGATGTTAAGATCATTGATATACAACAACACTGCATTTATAAAACGTTAAGAGCTGGCCATACAAGTATTTGTAGCAGTGTTCAATTTCTTCCTTGGAGACCTTGGGAAGTTATTACTGGAGGTCTTGATTCGAAGCTCATTATGTGGGACTTCTCCAGAGGGCGCCCCTATAAGATGATCGATTTTGCAGGTATACCTGAAAAAGAAAGTAGTTTGAGTGGTGGAGGCCAATGCTTCAATCCTGCATTTGTTCATGCGATAGTGGTGCCTGAAGTTGATATGTTGGACAAATTGGGACATATTTGTGTCGTGGCAAAGGGTGATGGTACCGTAAATGTCATCAATATCAAATCCAAACTTGATTCTGAGCAGTCAAAAAGTTCAAAAAAGGTGGGAAGATCCAAAACAAGATCAAAGGATGTTAGCACAGATGAAGAACAAGCTGTAGGAAAGGGTCCACAATTTGATTACTCTATTGGTGTTCAACTTTTCAGGGCTTTTTCTCAATTTGGGGATATAGGGAAATTCATAATTTCTGGCGGGAATGATAAGTTCATAAAGGTTTGGAATTGGCCTGGGTTTTCTGAAGCAGCCGACAAAAGTAATCTTCTACAGTTAAACATCGATGCGAAGAAAAAGGTTAATTGGCTGTGTACGACTCCATCTGAAACGGAAAACCTTGTGGTTTGTGACACAACTAAAGCAGTGAAGTTTTTTATGAAAATGATGGAGGCGGCGGCTCCATTGTGCCACAACTGCGGTGAGCAAGTTGGGTTTGACAAAAATGGAGAGATTTTTGTCGCCTGCCATGACTGCAATTTTCCCATTTGCAAAATTTGTGTGGAGTTCGAGATCAAGGAAGGCCGTAATTTTTGCTTGCGATGTGGAACCCCTTACTTCGAATACTGCAAGACTAATACTGAAACAAATGTATCAGGTAATCGATCAACGATGGCAGGCCACCTTAACAGTCCTCAGGATGGTGGAATTCATTCTAGACATGTTAGCAGCGTGTCAACTGTCGAAAGTGAAGTAAATGATGAGTCAGGTAACCCAATATGGAAGAACAGAGTGGAGAGTTGGAAGGACAAGAAGAATAAGAAGAAAAAAACTGCTGTAACTAAGGCTGAAATAAATAAAGAGGCTCAAATTCCTTCTCAACAGCAAATGGAAGAGAAAAAGGCATTGGAGGCTGGACAACCACTTTCAACCATTATTCCCATTCCATCCAGTAAACTAACGCCTTATAGAATTGTGATAGTGATGCGATTGATCATTCTGGCTCTTTTCTTCCATTATAGAGTTACAAATCCCGTTGACAGTGCATTTGGTCTATGGCTCACTTCTATTATATGTGAGATATGGTTTGCTGTCTCTTGGGTGTTAGATCAGTTCCCTAAATGGTATCCTATCAATAGGGAGACATTCACTGATAGGCTATCAGAAAGATTTGAAAGAGAGGGTGAGATCTCTGAGCTTGCTGCTGTGGATTTCTTCGTGAGTACAGTCGACCCCTTGAAAGAACCACCGCTTATCACTGCCAATACTGTGCTTTCTATACTTGCTGTGGACTACCCTGTTGATAAAGTCTCCTGCTATGTATCTGATGATGGTGCGGCGATGCTTACATTTGAATCACTAGTCGAAACTTCTGATTTTGCTAGGAAGTGGGTTCCATTCTGCAAGAAATTTTCCATTGAACCTCGTGCACCAGAGTTCTACTTTTCGCAGAAGATTGACTATTTGAAGGATAAAGTGCAGCCTTCATTTGTGAAGGAACGCAGAGCTATGAAAAGAGATTATGAAGAGTTCAAAGTCCGAATCAATGCTTTAGTAGCAAAAGCTCAGAAAACACCCGATGAAGGCTGGACAATGCAAGATGGCACACCTTGGCCTGGAAATAACTCCCGTGATCATCCTGGGATGATTCAGGTTTTTCTTGGCAATACCGGAGCCCATGACCTTGATGGGAATGAACTTCCGCGTCTGGTATATGTCTCCAGAGAGAAGCGACCAGGTTACCAACACCACAAAAAAGCTGGTGCAGAAAATGCTCTTGTAAGAGTATCTGCAGTTCTGACAAATGCTCCTTACATTCTCAATCTTGACTGTGATCACTATGTCAACAATAGTAAGGCAATTAGGGAGGCAATGTGTTTCTTGATGGACCCGCAAGTTGGTCGGGATCTTTGCTATGTGCAGTTTCCTCAGAGATTTGATGGCATCGATCGCAGTGACAGATATGCCAATCGCAACACTGTTTTCTTTGATGTTAACATGAAAGGATTGGACGGCATTCAGGGACCGGTTTATGTTGGTACTGGTTGCGTGTTCAACAGGCAAGCTCTTTATGGTTATGGGCCTCCTTCTATGCCTAGCTTACCCAAGGCCTCCTCCTCATCTTGCTCATGGTGTGGCTGCTGCTCTTGTTGCTGCCCCTCGAAGAAGCCCTCAAAAGATGTCAATGAAGTTTATCGAGATGCAAAAAGAGAAGAGCTTGATGCTGCAATCTTTAACCTCAGAGAAATCAATAATTATGATGAATATGAGAGGTCAATGCTGATCTCCCAAATGAGCTTTGAGAAGACATTTGGCTTATCTTCGGTATTCATCGAGTCTACAATTATGGAAAATGGAGGCGTGGCTGAATCTGCTAACCCGTCAACGTTGATCAAAGAAGCAATTCATATTGGTTGGATATATGGTTCAGTCACTGAGGATATCTTAACTGGCTTTAAAATGCAATGCCGGGGATGGAGGTCAGTTTACTGCATGCCCTTAAGACCTGCATTCAAAGGTTCGGCACCCATTAACCTTTCAGATCGGCTGCACCAAGTTCTTCGATGGGCACTTGGATCCGTTGAGATTTTTCTGAGCCGTCACTGCCCTCTTTGGTATGGATTCTCCGGTGGCCGCCTCAAATGGCTTCAGAGATTGGCATATGTCAACACAATTGTCTACCCATTTACCTCTCTTCCTCTCATTGCTTATTGTTCATTGCCAGCAATTTGCCTCTTGACCGGAAAATTCATTATTCCTACGCTCTCAAACTTGGCAAGCCTCCTGTTTCTTGGCCTCTTCATCTCCATCATCCTCACAAGTGTTCTTGAGCTGCGATGGAGTGGAGTCAGCATTGAGGATTTGTGGCGAAACGAGCAATTCTGGGTCATTGGAGGCGTATCGGCTCATCTCTTTGCCGTCTTTCAAGGATTTCTGAAGATGTTGGCCGGAATCGACACCAATTTCACTGTCACTGCAAAGGCTGCCGATGATGCTGAATTTGGAGAGCTGTACATGGTCAAATGGACAACCCTTTTGATTGTTCCAACAACTCTGCTCATCGTCAACATGGTTGGTGTTGTGGCTGGATTCTCTGATGCTCTCAATGGAGGATACGAAGCTTGGGGCCCACTTTTCGGAAAGGTGTTTTTCGCTTTCTGGGTCATTTTCCATCTTTATCCGTTCCTCAAAGGTCTCATGGGTCGTCAAAATCGAACTCCAACAATTGTTGTTCTGTGGTCGGTCCTGTTGGCATCCGTTTTCTCGCTCATCTGGGTCAAGATCGATCCGTTTGTGAGTAAAGTTGACAGTACAAGCATAGCTCAGAGCTGTATTTCCATCGATTGTTAA | 3999 | 43.44 | MADSRPRRLRGHTATATCCIASRNRPGLVATSGEDGCVCWFDMRCKEAVCIMDISKEPISSLCFKQGNEDIIYVSTGKEVKSFDLHQVTSWKPLETYNFNKEEINQVACGSKSSFLAAADDGGDVKIIDIQQHCIYKTLRAGHTSICSSVQFLPWRPWEVITGGLDSKLIMWDFSRGRPYKMIDFAGIPEKESSLSGGGQCFNPAFVHAIVVPEVDMLDKLGHICVVAKGDGTVNVINIKSKLDSEQSKSSKKVGRSKTRSKDVSTDEEQAVGKGPQFDYSIGVQLFRAFSQFGDIGKFIISGGNDKFIKVWNWPGFSEAADKSNLLQLNIDAKKKVNWLCTTPSETENLVVCDTTKAVKFFMKMMEAAAPLCHNCGEQVGFDKNGEIFVACHDCNFPICKICVEFEIKEGRNFCLRCGTPYFEYCKTNTETNVSGNRSTMAGHLNSPQDGGIHSRHVSSVSTVESEVNDESGNPIWKNRVESWKDKKNKKKKTAVTKAEINKEAQIPSQQQMEEKKALEAGQPLSTIIPIPSSKLTPYRIVIVMRLIILALFFHYRVTNPVDSAFGLWLTSIICEIWFAVSWVLDQFPKWYPINRETFTDRLSERFEREGEISELAAVDFFVSTVDPLKEPPLITANTVLSILAVDYPVDKVSCYVSDDGAAMLTFESLVETSDFARKWVPFCKKFSIEPRAPEFYFSQKIDYLKDKVQPSFVKERRAMKRDYEEFKVRINALVAKAQKTPDEGWTMQDGTPWPGNNSRDHPGMIQVFLGNTGAHDLDGNELPRLVYVSREKRPGYQHHKKAGAENALVRVSAVLTNAPYILNLDCDHYVNNSKAIREAMCFLMDPQVGRDLCYVQFPQRFDGIDRSDRYANRNTVFFDVNMKGLDGIQGPVYVGTGCVFNRQALYGYGPPSMPSLPKASSSSCSWCGCCSCCCPSKKPSKDVNEVYRDAKREELDAAIFNLREINNYDEYERSMLISQMSFEKTFGLSSVFIESTIMENGGVAESANPSTLIKEAIHIGWIYGSVTEDILTGFKMQCRGWRSVYCMPLRPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPLWYGFSGGRLKWLQRLAYVNTIVYPFTSLPLIAYCSLPAICLLTGKFIIPTLSNLASLLFLGLFISIILTSVLELRWSGVSIEDLWRNEQFWVIGGVSAHLFAVFQGFLKMLAGIDTNFTVTAKAADDAEFGELYMVKWTTLLIVPTTLLIVNMVGVVAGFSDALNGGYEAWGPLFGKVFFAFWVIFHLYPFLKGLMGRQNRTPTIVVLWSVLLASVFSLIWVKIDPFVSKVDSTSIAQSCISIDC | 1332 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 8410840 | 8421965 | + | Bpe004453.2 | Bpe11g01127 | 111272 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe11g01127 | 1332 | MobiDBLite | consensus disorder prediction | 446 | 472 | - | - | |
Bpe11g01127 | 1332 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 358 | 443 | IPR013083 | - | |
Bpe11g01127 | 1332 | SUPERFAMILY | RING/U-box | 364 | 428 | - | - | |
Bpe11g01127 | 1332 | PANTHER | X-BOX TRANSCRIPTION FACTOR-RELATED | 366 | 1332 | - | - | |
Bpe11g01127 | 1332 | Pfam | Cellulose synthase | 619 | 1323 | IPR005150 | GO:0016020|GO:0016760|GO:0030244 | |
Bpe11g01127 | 1332 | PANTHER | CELLULOSE SYNTHASE A CATALYTIC SUBUNIT 8 [UDP-FORMING] | 366 | 1332 | - | - | |
Bpe11g01127 | 1332 | MobiDBLite | consensus disorder prediction | 248 | 270 | - | - | |
Bpe11g01127 | 1332 | Gene3D | Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 772 | 911 | IPR029044 | - | |
Bpe11g01127 | 1332 | Gene3D | - | 2 | 277 | IPR015943 | GO:0005515 | |
Bpe11g01127 | 1332 | Pfam | Zinc-binding RING-finger | 368 | 423 | IPR027934 | - | |
Bpe11g01127 | 1332 | ProSitePatterns | Trp-Asp (WD) repeats signature. | 160 | 174 | IPR019775 | - | |
Bpe11g01127 | 1332 | SMART | WD40_4 | 280 | 313 | IPR001680 | GO:0005515 | |
Bpe11g01127 | 1332 | SMART | WD40_4 | 90 | 129 | IPR001680 | GO:0005515 | |
Bpe11g01127 | 1332 | SMART | WD40_4 | 47 | 84 | IPR001680 | GO:0005515 | |
Bpe11g01127 | 1332 | SMART | WD40_4 | 2 | 42 | IPR001680 | GO:0005515 | |
Bpe11g01127 | 1332 | SMART | WD40_4 | 132 | 173 | IPR001680 | GO:0005515 | |
Bpe11g01127 | 1332 | MobiDBLite | consensus disorder prediction | 248 | 269 | - | - | |
Bpe11g01127 | 1332 | SUPERFAMILY | WD40 repeat-like | 7 | 361 | IPR036322 | GO:0005515 | |
Bpe11g01127 | 1332 | SUPERFAMILY | Nucleotide-diphospho-sugar transferases | 633 | 1140 | IPR029044 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe11g01127 | Bpe-Chr11:8410840 | Bpe13g01174 | Bpe-Chr13:17147738 | 0 | dispersed | |
Bpe11g01127 | Bpe-Chr11:8410840 | Bpe06g00341 | Bpe-Chr6:14838221 | 0 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe11g01127 | K10999 | - | csv:101208988 | 2143.62 |