Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g01127 ATGGCGGATTCGAGACCAAGAAGACTGAGAGGGCATACGGCGACTGCAACGTGCTGCATCGCCTCGAGGAACCGCCCTGGTCTAGTCGCTACTTCCGGTGAGGATGGCTGTGTTTGCTGGTTTGATATGCGATGCAAAGAGGCTGTATGCATTATGGATATTTCAAAGGAGCCTATTTCATCTCTTTGTTTCAAACAAGGGAATGAAGATATCATTTATGTATCGACTGGAAAAGAAGTCAAATCTTTTGATTTGCATCAGGTTACCTCATGGAAACCGTTGGAAACTTATAATTTCAATAAGGAGGAGATAAATCAGGTTGCATGTGGTTCCAAGTCTTCTTTTCTGGCTGCAGCTGATGATGGGGGTGATGTTAAGATCATTGATATACAACAACACTGCATTTATAAAACGTTAAGAGCTGGCCATACAAGTATTTGTAGCAGTGTTCAATTTCTTCCTTGGAGACCTTGGGAAGTTATTACTGGAGGTCTTGATTCGAAGCTCATTATGTGGGACTTCTCCAGAGGGCGCCCCTATAAGATGATCGATTTTGCAGGTATACCTGAAAAAGAAAGTAGTTTGAGTGGTGGAGGCCAATGCTTCAATCCTGCATTTGTTCATGCGATAGTGGTGCCTGAAGTTGATATGTTGGACAAATTGGGACATATTTGTGTCGTGGCAAAGGGTGATGGTACCGTAAATGTCATCAATATCAAATCCAAACTTGATTCTGAGCAGTCAAAAAGTTCAAAAAAGGTGGGAAGATCCAAAACAAGATCAAAGGATGTTAGCACAGATGAAGAACAAGCTGTAGGAAAGGGTCCACAATTTGATTACTCTATTGGTGTTCAACTTTTCAGGGCTTTTTCTCAATTTGGGGATATAGGGAAATTCATAATTTCTGGCGGGAATGATAAGTTCATAAAGGTTTGGAATTGGCCTGGGTTTTCTGAAGCAGCCGACAAAAGTAATCTTCTACAGTTAAACATCGATGCGAAGAAAAAGGTTAATTGGCTGTGTACGACTCCATCTGAAACGGAAAACCTTGTGGTTTGTGACACAACTAAAGCAGTGAAGTTTTTTATGAAAATGATGGAGGCGGCGGCTCCATTGTGCCACAACTGCGGTGAGCAAGTTGGGTTTGACAAAAATGGAGAGATTTTTGTCGCCTGCCATGACTGCAATTTTCCCATTTGCAAAATTTGTGTGGAGTTCGAGATCAAGGAAGGCCGTAATTTTTGCTTGCGATGTGGAACCCCTTACTTCGAATACTGCAAGACTAATACTGAAACAAATGTATCAGGTAATCGATCAACGATGGCAGGCCACCTTAACAGTCCTCAGGATGGTGGAATTCATTCTAGACATGTTAGCAGCGTGTCAACTGTCGAAAGTGAAGTAAATGATGAGTCAGGTAACCCAATATGGAAGAACAGAGTGGAGAGTTGGAAGGACAAGAAGAATAAGAAGAAAAAAACTGCTGTAACTAAGGCTGAAATAAATAAAGAGGCTCAAATTCCTTCTCAACAGCAAATGGAAGAGAAAAAGGCATTGGAGGCTGGACAACCACTTTCAACCATTATTCCCATTCCATCCAGTAAACTAACGCCTTATAGAATTGTGATAGTGATGCGATTGATCATTCTGGCTCTTTTCTTCCATTATAGAGTTACAAATCCCGTTGACAGTGCATTTGGTCTATGGCTCACTTCTATTATATGTGAGATATGGTTTGCTGTCTCTTGGGTGTTAGATCAGTTCCCTAAATGGTATCCTATCAATAGGGAGACATTCACTGATAGGCTATCAGAAAGATTTGAAAGAGAGGGTGAGATCTCTGAGCTTGCTGCTGTGGATTTCTTCGTGAGTACAGTCGACCCCTTGAAAGAACCACCGCTTATCACTGCCAATACTGTGCTTTCTATACTTGCTGTGGACTACCCTGTTGATAAAGTCTCCTGCTATGTATCTGATGATGGTGCGGCGATGCTTACATTTGAATCACTAGTCGAAACTTCTGATTTTGCTAGGAAGTGGGTTCCATTCTGCAAGAAATTTTCCATTGAACCTCGTGCACCAGAGTTCTACTTTTCGCAGAAGATTGACTATTTGAAGGATAAAGTGCAGCCTTCATTTGTGAAGGAACGCAGAGCTATGAAAAGAGATTATGAAGAGTTCAAAGTCCGAATCAATGCTTTAGTAGCAAAAGCTCAGAAAACACCCGATGAAGGCTGGACAATGCAAGATGGCACACCTTGGCCTGGAAATAACTCCCGTGATCATCCTGGGATGATTCAGGTTTTTCTTGGCAATACCGGAGCCCATGACCTTGATGGGAATGAACTTCCGCGTCTGGTATATGTCTCCAGAGAGAAGCGACCAGGTTACCAACACCACAAAAAAGCTGGTGCAGAAAATGCTCTTGTAAGAGTATCTGCAGTTCTGACAAATGCTCCTTACATTCTCAATCTTGACTGTGATCACTATGTCAACAATAGTAAGGCAATTAGGGAGGCAATGTGTTTCTTGATGGACCCGCAAGTTGGTCGGGATCTTTGCTATGTGCAGTTTCCTCAGAGATTTGATGGCATCGATCGCAGTGACAGATATGCCAATCGCAACACTGTTTTCTTTGATGTTAACATGAAAGGATTGGACGGCATTCAGGGACCGGTTTATGTTGGTACTGGTTGCGTGTTCAACAGGCAAGCTCTTTATGGTTATGGGCCTCCTTCTATGCCTAGCTTACCCAAGGCCTCCTCCTCATCTTGCTCATGGTGTGGCTGCTGCTCTTGTTGCTGCCCCTCGAAGAAGCCCTCAAAAGATGTCAATGAAGTTTATCGAGATGCAAAAAGAGAAGAGCTTGATGCTGCAATCTTTAACCTCAGAGAAATCAATAATTATGATGAATATGAGAGGTCAATGCTGATCTCCCAAATGAGCTTTGAGAAGACATTTGGCTTATCTTCGGTATTCATCGAGTCTACAATTATGGAAAATGGAGGCGTGGCTGAATCTGCTAACCCGTCAACGTTGATCAAAGAAGCAATTCATATTGGTTGGATATATGGTTCAGTCACTGAGGATATCTTAACTGGCTTTAAAATGCAATGCCGGGGATGGAGGTCAGTTTACTGCATGCCCTTAAGACCTGCATTCAAAGGTTCGGCACCCATTAACCTTTCAGATCGGCTGCACCAAGTTCTTCGATGGGCACTTGGATCCGTTGAGATTTTTCTGAGCCGTCACTGCCCTCTTTGGTATGGATTCTCCGGTGGCCGCCTCAAATGGCTTCAGAGATTGGCATATGTCAACACAATTGTCTACCCATTTACCTCTCTTCCTCTCATTGCTTATTGTTCATTGCCAGCAATTTGCCTCTTGACCGGAAAATTCATTATTCCTACGCTCTCAAACTTGGCAAGCCTCCTGTTTCTTGGCCTCTTCATCTCCATCATCCTCACAAGTGTTCTTGAGCTGCGATGGAGTGGAGTCAGCATTGAGGATTTGTGGCGAAACGAGCAATTCTGGGTCATTGGAGGCGTATCGGCTCATCTCTTTGCCGTCTTTCAAGGATTTCTGAAGATGTTGGCCGGAATCGACACCAATTTCACTGTCACTGCAAAGGCTGCCGATGATGCTGAATTTGGAGAGCTGTACATGGTCAAATGGACAACCCTTTTGATTGTTCCAACAACTCTGCTCATCGTCAACATGGTTGGTGTTGTGGCTGGATTCTCTGATGCTCTCAATGGAGGATACGAAGCTTGGGGCCCACTTTTCGGAAAGGTGTTTTTCGCTTTCTGGGTCATTTTCCATCTTTATCCGTTCCTCAAAGGTCTCATGGGTCGTCAAAATCGAACTCCAACAATTGTTGTTCTGTGGTCGGTCCTGTTGGCATCCGTTTTCTCGCTCATCTGGGTCAAGATCGATCCGTTTGTGAGTAAAGTTGACAGTACAAGCATAGCTCAGAGCTGTATTTCCATCGATTGTTAA 3999 43.44 MADSRPRRLRGHTATATCCIASRNRPGLVATSGEDGCVCWFDMRCKEAVCIMDISKEPISSLCFKQGNEDIIYVSTGKEVKSFDLHQVTSWKPLETYNFNKEEINQVACGSKSSFLAAADDGGDVKIIDIQQHCIYKTLRAGHTSICSSVQFLPWRPWEVITGGLDSKLIMWDFSRGRPYKMIDFAGIPEKESSLSGGGQCFNPAFVHAIVVPEVDMLDKLGHICVVAKGDGTVNVINIKSKLDSEQSKSSKKVGRSKTRSKDVSTDEEQAVGKGPQFDYSIGVQLFRAFSQFGDIGKFIISGGNDKFIKVWNWPGFSEAADKSNLLQLNIDAKKKVNWLCTTPSETENLVVCDTTKAVKFFMKMMEAAAPLCHNCGEQVGFDKNGEIFVACHDCNFPICKICVEFEIKEGRNFCLRCGTPYFEYCKTNTETNVSGNRSTMAGHLNSPQDGGIHSRHVSSVSTVESEVNDESGNPIWKNRVESWKDKKNKKKKTAVTKAEINKEAQIPSQQQMEEKKALEAGQPLSTIIPIPSSKLTPYRIVIVMRLIILALFFHYRVTNPVDSAFGLWLTSIICEIWFAVSWVLDQFPKWYPINRETFTDRLSERFEREGEISELAAVDFFVSTVDPLKEPPLITANTVLSILAVDYPVDKVSCYVSDDGAAMLTFESLVETSDFARKWVPFCKKFSIEPRAPEFYFSQKIDYLKDKVQPSFVKERRAMKRDYEEFKVRINALVAKAQKTPDEGWTMQDGTPWPGNNSRDHPGMIQVFLGNTGAHDLDGNELPRLVYVSREKRPGYQHHKKAGAENALVRVSAVLTNAPYILNLDCDHYVNNSKAIREAMCFLMDPQVGRDLCYVQFPQRFDGIDRSDRYANRNTVFFDVNMKGLDGIQGPVYVGTGCVFNRQALYGYGPPSMPSLPKASSSSCSWCGCCSCCCPSKKPSKDVNEVYRDAKREELDAAIFNLREINNYDEYERSMLISQMSFEKTFGLSSVFIESTIMENGGVAESANPSTLIKEAIHIGWIYGSVTEDILTGFKMQCRGWRSVYCMPLRPAFKGSAPINLSDRLHQVLRWALGSVEIFLSRHCPLWYGFSGGRLKWLQRLAYVNTIVYPFTSLPLIAYCSLPAICLLTGKFIIPTLSNLASLLFLGLFISIILTSVLELRWSGVSIEDLWRNEQFWVIGGVSAHLFAVFQGFLKMLAGIDTNFTVTAKAADDAEFGELYMVKWTTLLIVPTTLLIVNMVGVVAGFSDALNGGYEAWGPLFGKVFFAFWVIFHLYPFLKGLMGRQNRTPTIVVLWSVLLASVFSLIWVKIDPFVSKVDSTSIAQSCISIDC 1332
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 8410840 8421965 + Bpe004453.2 Bpe11g01127 111272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g01127 1332 MobiDBLite consensus disorder prediction 446 472 - -
Bpe11g01127 1332 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 358 443 IPR013083 -
Bpe11g01127 1332 SUPERFAMILY RING/U-box 364 428 - -
Bpe11g01127 1332 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 366 1332 - -
Bpe11g01127 1332 Pfam Cellulose synthase 619 1323 IPR005150 GO:0016020|GO:0016760|GO:0030244
Bpe11g01127 1332 PANTHER CELLULOSE SYNTHASE A CATALYTIC SUBUNIT 8 [UDP-FORMING] 366 1332 - -
Bpe11g01127 1332 MobiDBLite consensus disorder prediction 248 270 - -
Bpe11g01127 1332 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 772 911 IPR029044 -
Bpe11g01127 1332 Gene3D - 2 277 IPR015943 GO:0005515
Bpe11g01127 1332 Pfam Zinc-binding RING-finger 368 423 IPR027934 -
Bpe11g01127 1332 ProSitePatterns Trp-Asp (WD) repeats signature. 160 174 IPR019775 -
Bpe11g01127 1332 SMART WD40_4 280 313 IPR001680 GO:0005515
Bpe11g01127 1332 SMART WD40_4 90 129 IPR001680 GO:0005515
Bpe11g01127 1332 SMART WD40_4 47 84 IPR001680 GO:0005515
Bpe11g01127 1332 SMART WD40_4 2 42 IPR001680 GO:0005515
Bpe11g01127 1332 SMART WD40_4 132 173 IPR001680 GO:0005515
Bpe11g01127 1332 MobiDBLite consensus disorder prediction 248 269 - -
Bpe11g01127 1332 SUPERFAMILY WD40 repeat-like 7 361 IPR036322 GO:0005515
Bpe11g01127 1332 SUPERFAMILY Nucleotide-diphospho-sugar transferases 633 1140 IPR029044 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe11g01127 Bpe-Chr11:8410840 Bpe13g01174 Bpe-Chr13:17147738 0 dispersed
Bpe11g01127 Bpe-Chr11:8410840 Bpe06g00341 Bpe-Chr6:14838221 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g01127 K10999 - csv:101208988 2143.62