Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g01139 ATGTACAAAATAATACCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTAACAACTTTCTGCCACTATTTATGTAAGCTTTTTTTCTCCACAGCTTCTCTCTCGAAACCCAAAATACCAAAAATACTGATAACAGATCTCTCTCTCTCTCTCTATCTCTCTCAGCACCTTTTTCCCACTACTTATTATAAGCTTCTCTTCCACAGCTGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCATGGCTGCGGTAGAAACCAATCAAGATCATGCGCAAGGAATTAAGCTCTTTGGGAAAACAATCACGTTGCATGATAAGCAAGTAAAGGACGGAGATAAAAGGGATGATGATCAGACGGCGGAGAAGAGGCCAGAAAAGATCATCCCTTGCCCTAGATGCAAGAGCATGGAGACTAAGTTCTGTTACTTCAACAACTATAACGTAAACCAGCCTAGACATTTCTGCAAGGGTTGCCAGAGGTACTGGACGGCCGGAGGAGCTCTCCGAAACGTTCCCATCGGAGCTGGTCGCCGGAAAGCAAAACCACCTTGTCAAAACACCATAGGTGGGTTGCCGGGAAGTTACCTTCATGACCCCTCTTCGGTGGCCGTGCACCAGTTTCAGTTAGATGGGGTGGTGGAGGATTGGAAAGTTATGATCAGCCATGGTAGTTTCCGGCAAGCTTTGCCGGTGAAGAGGCGGAGGGACGGCTGTGGAGGTCAAACTTGTTGA 894 42.06 MYKIIPLSLSLSLSLSLTTFCHYLCKLFFSTASLSKPKIPKILITDLSLSLYLSQHLFPTTYYKLLFHSCSLSLSLSLSLSLSLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSLSLSLSLSLSLSLSLMAAVETNQDHAQGIKLFGKTITLHDKQVKDGDKRDDDQTAEKRPEKIIPCPRCKSMETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRKAKPPCQNTIGGLPGSYLHDPSSVAVHQFQLDGVVEDWKVMISHGSFRQALPVKRRRDGCGGQTC 297
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 8475428 8476321 + Bpe004465.1 Bpe11g01139 111284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g01139 297 Pfam Dof domain, zinc finger 180 235 IPR003851 GO:0003677|GO:0006355
Bpe11g01139 297 ProSitePatterns Zinc finger Dof-type signature. 184 220 IPR003851 GO:0003677|GO:0006355
Bpe11g01139 297 PANTHER CYCLIC DOF FACTOR 2 142 294 IPR045174 GO:0003700|GO:0006355
Bpe11g01139 297 Coils Coil 84 84 - -
Bpe11g01139 297 ProSiteProfiles Zinc finger Dof-type profile. 182 236 IPR003851 GO:0003677|GO:0006355
Bpe11g01139 297 PANTHER DOF ZINC FINGER PROTEIN DOF1.5-LIKE 142 294 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe08g00765 Bpe-Chr8:9430318 Bpe11g01139 Bpe-Chr11:8475428 1.84E-53 dispersed
Bpe08g00766 Bpe-Chr8:9450191 Bpe11g01139 Bpe-Chr11:8475428 3.82E-51 dispersed
Bpe11g01139 Bpe-Chr11:8475428 Bpe14g00173 Bpe-Chr14:2111758 1.55E-33 dispersed
Bpe11g01139 Bpe-Chr11:8475428 Bpe02g01093 Bpe-Chr2:14443952 1.45E-88 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
22087 PF02701 zf-Dof 1.70E-31 No_clan Bpe TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g01139 - - zju:107410557 231.106