Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g01148 ATGCCACGCCCTTCTTCTTCTTCTTCTTCTATCCTCACATGTTTGCTCTCTCTCATCCTCCTTTCTCTCTCCTCAGAAACACTTGCAGCCGCAGCAAACACCACCCGCCGCCATCGACAACTCTCCATTAACTACTACAACAAAACCTGTCCTCAAGTTGACCAACTCGTCGCCTCCATTACCACCCAGCAGTTCAAAGAATCTCCAGTTTCTGGCCCTGCAACTCTTCGTCTCTTTTTCCATGACTGCTTCGTCGAAGGCTGTGATGGATCGATACTGATATCGTCGAATCCAGAAAGCAAAGTGATGGCCGAGAAAGACGCAGAGGATAATAAGGATTTGAGGATGGAGGGGTTTGAGATTGTGAAGAAGGCGAAGGCCGTGGTTGAAAGCAAGTGCCCTGGTGTGGTGTCTTGTGCTGACATTCTAGCCATGGCAGCAAGAGATTATGTCCACTTGGTAGGAGGGCCTTACTACGAGGTAAAGAAAGGGAGATGGGATGGAAAAATATCAATGGCATCAAGAGTAATCACCAACCTACCTCGAGCAAACTCCACTGTCGATTTTCTTCTCAAACTCTTCCACATGAAAGGCCTAAACGCCTCTGACCTAGTTGTCCTCTCTGGCGCACACACGATTGGCTTTGCTCATTGTGACCACTTCATCCATCGACTCTACGACTATGGTGGCACAAAGCAACCAGATCCATCCATGGACTCGAGGCTCTTGAAGGCTCTAAAGATGTCGTGCCCTTTATCTGGTGGAAACAATGACATCGTTGCTCCTTTTGATGTGACTACGCCATTTTTATTCGATCATGTCTATTACGCTAATTTAGAAAGAAAATTAGGGTTGCTAGGATCTGATCAGGCCTTGTTTATGGACGTAAGAACGAAGCCTCTCGTGGAAGCCATGGCTAAGGACAAAGAAAAGTTTTTTCAAGCCTTTGCAGTGGCTATGGAGAAGATGGGATCCATTGGAGTGAAGAGAGGAAGAAGACATGGGGAGAGAAGGATAGATTTAGGCATTAAAAGAAGGACACTGGCGACGAAGACGAGACTGCAACATATCAGATCAATGAGAGCCGTCGTTCAGCGAGTCTCCTCCGCCTCTGTTGAGGTTGAAGGTTGCGTGATTTCGGAGATCGGGCCGGGCTTACTCATCTTCGTTGGGCTTCATGAATCCGACGCCGATGCAGATTCCGACTTCATATGCCGGAAAGCCCTAAACATGAGATTATTTCCAAACGAAAATACTGGAAGAGCATGGGATTTGAGTGTAATGCAGAAGAATCATGAAGTTCTCTTAGCAGTGAGCCAATTTACGTTGTATGGAACATTGAAGGGTAACAAGCCAGATTTTCACGTTGCCATGCCACCCCAGAATGCGAAGCCTTTCTATGCTTCTTTGGTTGACAGATTTGGGAAATCCTATAATCCAGACAAGATAAAAGGTCAATTTATTTTTTTCTCATTTATCGTTAATTTGGTTAATGACGGGCCGGTAACTATTCAGCTCGACTCACAATCCTCCAAGTGA 1539 46.07 MPRPSSSSSSILTCLLSLILLSLSSETLAAAANTTRRHRQLSINYYNKTCPQVDQLVASITTQQFKESPVSGPATLRLFFHDCFVEGCDGSILISSNPESKVMAEKDAEDNKDLRMEGFEIVKKAKAVVESKCPGVVSCADILAMAARDYVHLVGGPYYEVKKGRWDGKISMASRVITNLPRANSTVDFLLKLFHMKGLNASDLVVLSGAHTIGFAHCDHFIHRLYDYGGTKQPDPSMDSRLLKALKMSCPLSGGNNDIVAPFDVTTPFLFDHVYYANLERKLGLLGSDQALFMDVRTKPLVEAMAKDKEKFFQAFAVAMEKMGSIGVKRGRRHGERRIDLGIKRRTLATKTRLQHIRSMRAVVQRVSSASVEVEGCVISEIGPGLLIFVGLHESDADADSDFICRKALNMRLFPNENTGRAWDLSVMQKNHEVLLAVSQFTLYGTLKGNKPDFHVAMPPQNAKPFYASLVDRFGKSYNPDKIKGQFIFFSFIVNLVNDGPVTIQLDSQSSK 512
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 8517769 8521409 - Bpe004474.1 Bpe11g01148 111293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g01148 512 TIGRFAM TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 360 508 IPR003732 GO:0002161|GO:0005737|GO:0051499
Bpe11g01148 512 ProSitePatterns Peroxidases proximal heme-ligand signature. 203 213 IPR019793 -
Bpe11g01148 512 SUPERFAMILY DTD-like 359 508 IPR023509 -
Bpe11g01148 512 PANTHER PEROXIDASE 19 29 333 - -
Bpe11g01148 512 Pfam Peroxidase 61 308 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bpe11g01148 512 PRINTS Haem peroxidase superfamily signature 155 167 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bpe11g01148 512 PRINTS Haem peroxidase superfamily signature 203 218 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bpe11g01148 512 PRINTS Haem peroxidase superfamily signature 72 86 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bpe11g01148 512 PRINTS Haem peroxidase superfamily signature 264 279 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bpe11g01148 512 PRINTS Haem peroxidase superfamily signature 137 154 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bpe11g01148 512 ProSitePatterns Peroxidases active site signature. 72 83 IPR019794 GO:0004601
Bpe11g01148 512 Gene3D Peroxidase, domain 2 181 323 - -
Bpe11g01148 512 Gene3D - 360 512 IPR023509 -
Bpe11g01148 512 CDD secretory_peroxidase 40 338 IPR033905 GO:0004601|GO:0042744
Bpe11g01148 512 Gene3D - 44 336 - -
Bpe11g01148 512 PANTHER PEROXIDASE 25-RELATED 29 333 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bpe11g01148 512 ProSiteProfiles Plant heme peroxidase family profile. 40 338 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bpe11g01148 512 SUPERFAMILY Heme-dependent peroxidases 40 337 IPR010255 GO:0004601|GO:0006979|GO:0020037
Bpe11g01148 512 PRINTS Plant peroxidase signature 50 69 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bpe11g01148 512 PRINTS Plant peroxidase signature 278 295 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bpe11g01148 512 PRINTS Plant peroxidase signature 262 277 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bpe11g01148 512 PRINTS Plant peroxidase signature 202 214 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bpe11g01148 512 PRINTS Plant peroxidase signature 318 331 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bpe11g01148 512 PRINTS Plant peroxidase signature 74 94 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bpe11g01148 512 PRINTS Plant peroxidase signature 117 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bpe11g01148 512 PRINTS Plant peroxidase signature 155 170 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bpe11g01148 512 PRINTS Plant peroxidase signature 136 146 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bpe11g01148 512 Pfam D-Tyr-tRNA(Tyr) deacylase 361 507 IPR003732 GO:0002161|GO:0005737|GO:0051499
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe11g01148 Bpe-Chr11:8517769 Bpe12g00751 Bpe-Chr12:13007450 5.37E-94 dispersed
Bpe11g01148 Bpe-Chr11:8517769 Bpe02g01899 Bpe-Chr2:20982565 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g01148 K00430 - vvi:100250264 503.442