Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g01163 ATGAGCCATACGAAGTTTGCGAATTGCATCAGGTTCTTTGTTGGGATTCTGTTGATCTCCACGCCGCCGTTTTGTTTTGGGGATACTGATCCTCGTGATGTTGCAGCAATCAACGCCCTGTTCGTTGCTCTTGGCTACCCGCCTCTTCCAGGATGGCTTCTTGTTGGTGGGGATCCTTGTGGACAGAAGTGGATAGGCGTTGACTGTGTTTTCTCGAACATAACGGCAATTCGACTCAGCGGTGCAAATTTGGGAGGCGAGCTCGGTGATAGCTTAGAATTCTTTGAGTCCATTATTTCAATTGATTTCAGCAACAATCATATCAGTGGGCCTATTCCACCTGCGTTACCTCCGACTCTAAGGAACGTGTCGTTGAATAAGAACCTCCTAAGTGGTGAATTACCTGATGCCTTTCAGCAGCTTACTAGTTTGATACATTTAGACATTTCCGATAATGGTTTAAATGGTCAGCTGCCTACATCGCTAGGGAATTTGTTATCTCTGAACACGTTACACTTGCAAAACAATCAACTTTCTGGAACACTTGATGTTCTGCAAGATCTTCCTCTTGCCGATTTGAATATAGAAAATAATTTATTTTCCGGGCCAATACCTGAAAAATTGCTGGCCATTCCAAACTTCAGAAAAGATGGCAATCCTTTCAATACAAGCATCATTCTACCTCCTCCTGCACCCGCTCCAGCTCCAGCCTCATTCCCTTTTCCCGGAGCACCATCTTCAGGGGGATCATCAGGGCAACAGGCAAATGCACCATCTGGCTCCGAAACTTCCGCGTCGAACAAACCTTCAAAATTTTTCACTGCTAAAAGGATCACTTTGCTTGCTATTATAGGGATAGCAATAATAATTTTATTAGGATTCTTGCTTATTCTGTCAAGATGCTTGAGAAAAAGAAAAGAAAAAAACCATAGTGATGCTGCATTTGCGGGTTCTAGAGAAAGGTCCAACTTCAGCGAGTCATCAGTTCTGCAAAGAAATTTAGAAAGAGTTCCAAAGGAGAGTGCTTTAAATTCACGAGATAGATTTGGAATCGACAATAGATTAACTGGTTTTACTCCAAATCTGGAAAAGACACGAGATGTGACAAGAGCAACTGCAGTTGGTTCGTCCCGAAACAAAGAACATGGGTCGGACTCGTATGACATGAGTGGAGTTTTCTTGCCACCACCGCCACCTCCCCCATCATCTCTATTTGAGAAAACTGGAAGTATGGCTGAGCTGCTTACAAGTAGACGGCCGACTAAGACTCTAAATCCTTATTCTGTTCAAGTTTTCTCCATTGCAACGCTTCAGCAGTTTACTGATAGTTTCTCCCAAGAAAATTTTGTTGGAATTGGAATGCTTGGTAGTGTTTATAAGGCTGAACTTCCTAGTGGAAAGATGTTGGCGGTCAAGAAATTGTCCATAGAAGCTTCTAAGTTGCAGAGTGATGAGGAATTTCTGGATATGGTATCGAATATGTCAAAGATTCGACATAATCACGTAGTGGGGCTCGTGGGTTATTGTTCTGAGCATGGCCAACGGCTGGTTGTACATGAATATTGCGAAAATGGGACACTTTACGATGGACTTCATGTGTACGAAGAGATCCATCGGAGACTTTCTTGGAAAATGCGTATCAGGGTGGCACTTGGGGCTGCAAGAGCGCTAGAGTATTTGCACGAGGGCTGTCAACCACCTATAGTGCACAAGAATTTCAAGTCTGCTAATCTCCTCTTCGATGACGAGCTTAAAGTTTATGTATCAGACTGTGGGTTCGCACCTCTCCTATCATCCGGTTTGGCGAGTCAGTCTTTGGGTCGAATACTCATGTCGTCTGGCTACGGAGCCCCTGAGTTTGAGTCGGGAAGTTACTCTTGCAAAAGTGATGTATATAGCTTTGGAGTTGTAATGTTGGAGCTCCTCACTGGTCGTAACTCCTGTGATCGGTCAAGACCTCGAGGGGAACAATTTTTGGTTAGATGGGCCGTTCCTCAGCTCCACGATATTGATAAACTGTCGAGAATGGTCGATCCGTCTCTAAATGGCGTTTATCCCGTCAAGTCGTTATCTCGTTTTGCTGATATAATCTCCTTATGTGTACAGCACGAGGCAGAATTCAGGCCGCCAATGTCGGAAATTGTGCAGGAACTCTTACAAATGACTTAG 2169 44.12 MSHTKFANCIRFFVGILLISTPPFCFGDTDPRDVAAINALFVALGYPPLPGWLLVGGDPCGQKWIGVDCVFSNITAIRLSGANLGGELGDSLEFFESIISIDFSNNHISGPIPPALPPTLRNVSLNKNLLSGELPDAFQQLTSLIHLDISDNGLNGQLPTSLGNLLSLNTLHLQNNQLSGTLDVLQDLPLADLNIENNLFSGPIPEKLLAIPNFRKDGNPFNTSIILPPPAPAPAPASFPFPGAPSSGGSSGQQANAPSGSETSASNKPSKFFTAKRITLLAIIGIAIIILLGFLLILSRCLRKRKEKNHSDAAFAGSRERSNFSESSVLQRNLERVPKESALNSRDRFGIDNRLTGFTPNLEKTRDVTRATAVGSSRNKEHGSDSYDMSGVFLPPPPPPPSSLFEKTGSMAELLTSRRPTKTLNPYSVQVFSIATLQQFTDSFSQENFVGIGMLGSVYKAELPSGKMLAVKKLSIEASKLQSDEEFLDMVSNMSKIRHNHVVGLVGYCSEHGQRLVVHEYCENGTLYDGLHVYEEIHRRLSWKMRIRVALGAARALEYLHEGCQPPIVHKNFKSANLLFDDELKVYVSDCGFAPLLSSGLASQSLGRILMSSGYGAPEFESGSYSCKSDVYSFGVVMLELLTGRNSCDRSRPRGEQFLVRWAVPQLHDIDKLSRMVDPSLNGVYPVKSLSRFADIISLCVQHEAEFRPPMSEIVQELLQMT 722
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 8628323 8632650 + Bpe004488.1 Bpe11g01163 111308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g01163 722 PANTHER LEUCINE RICH REPEAT KINASE 2 8 135 - -
Bpe11g01163 722 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 3-LIKE ISOFORM X1 8 135 - -
Bpe11g01163 722 MobiDBLite consensus disorder prediction 366 387 - -
Bpe11g01163 722 SUPERFAMILY L domain-like 31 210 - -
Bpe11g01163 722 ProSiteProfiles Leucine-rich repeat profile. 167 189 IPR001611 GO:0005515
Bpe11g01163 722 Gene3D Transferase(Phosphotransferase) domain 1 522 722 - -
Bpe11g01163 722 ProSiteProfiles Protein kinase domain profile. 444 719 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe11g01163 722 Gene3D Ribonuclease Inhibitor 46 227 IPR032675 -
Bpe11g01163 722 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 3-LIKE ISOFORM X1 123 721 - -
Bpe11g01163 722 MobiDBLite consensus disorder prediction 236 268 - -
Bpe11g01163 722 SUPERFAMILY Protein kinase-like (PK-like) 422 718 IPR011009 -
Bpe11g01163 722 MobiDBLite consensus disorder prediction 366 380 - -
Bpe11g01163 722 PANTHER LEUCINE RICH REPEAT KINASE 2 123 721 - -
Bpe11g01163 722 MobiDBLite consensus disorder prediction 316 330 - -
Bpe11g01163 722 MobiDBLite consensus disorder prediction 244 268 - -
Bpe11g01163 722 MobiDBLite consensus disorder prediction 310 330 - -
Bpe11g01163 722 Pfam Protein tyrosine and serine/threonine kinase 448 718 IPR001245 GO:0004672|GO:0006468
Bpe11g01163 722 Gene3D Phosphorylase Kinase; domain 1 409 521 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe11g01163 Bpe-Chr11:8628323 Bpe14g00667 Bpe-Chr14:5332924 0 dispersed
Bpe11g01163 Bpe-Chr11:8628323 Bpe07g00562 Bpe-Chr7:12165674 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63589 PF07714 PK_Tyr_Ser-Thr 8.40E-36 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g01163 - - jre:108992598 770.77