Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g01176 ATGGCTACAACGGACGCTTCCCCGAAATTTCCCAGTGTACCGAAGTCACCCGATTTCCTGCCCCAAATATCGGTTTCTCCTCCGACGCACGACGGCCTTTTCTTCTCTCAGTTTATGATTTGCGGGTCTATAGCCGGATCGGTGGAGCATATGGCGATGTTTCCGGTCGATACTCTCAAGACTCGGATGCAGGTTCTAGGTGGATCTTGCTCCCCCCAACCCGTCGGACTCCGGCTAGCCCTCGGCTCTATCTTGAAGCTAGAGGGTCCTTCCGGTCTCTATCGCGGGATTGGCGCAATGGGTCTCGGCGCCGGACCGGCCCACGCTGTTTATTTCTCTGTTTACGAAGTTTGCAAAGAAGTTCTTTCCGGTGGAAATCCGAACAACTCGACTGCCCATGCCGCTTCCGGCGTTTTTGCGACTGTCGCAAGTGACGCAGTGATTACGCCGATGGATATGGTGAAGCAGAGGCTGCAGTTGAAAAGCAGCCCTTACATCGGAGTTGGAGACTGCGTGAGAAGAGTACTAATGGAAGAAGGGGTCGGAGCTTTTTACGCTTCGTATCGAACGACTGTTTTGATGAACGCGCCGTTCACAGCCGTCCATTTTGCTGCATACGAAGCTGCAAAGAGAGCTCTAATGGAGGTTTCTCCAGAGAGCGCTAACGACGAGAGGCTGGTGGTTCATGCGACGGCGGGCGCAGTCGCAGGTGCCTTAGCTGCTGCTTTGACTACGCCTCTGGACGTTGTTAAAACTCAGTTGCAGTGCCAGGGAGTGTGTGGGTGTGACAGACTATCAAGCAGTTCCATTGGAGATGTGGTAAGAAGGGTGATTGGGAAGGAGGGATATCACGGGCTGTTGAGAGGGTGGATTCCTAGGATGCTTTTTCATGCACCAGCTGCTGCAATTTGCTGGTCTACTTATGAAGCTTCGAAAACCTTCTTTCAAAAACACAATCACAACACTTAG 969 52.53 MATTDASPKFPSVPKSPDFLPQISVSPPTHDGLFFSQFMICGSIAGSVEHMAMFPVDTLKTRMQVLGGSCSPQPVGLRLALGSILKLEGPSGLYRGIGAMGLGAGPAHAVYFSVYEVCKEVLSGGNPNNSTAHAASGVFATVASDAVITPMDMVKQRLQLKSSPYIGVGDCVRRVLMEEGVGAFYASYRTTVLMNAPFTAVHFAAYEAAKRALMEVSPESANDERLVVHATAGAVAGALAAALTTPLDVVKTQLQCQGVCGCDRLSSSSIGDVVRRVIGKEGYHGLLRGWIPRMLFHAPAAAICWSTYEASKTFFQKHNHNT 322
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 8717744 8718815 + Bpe004501.2 Bpe11g01176 111321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g01176 322 ProSiteProfiles Solute carrier (Solcar) repeat profile. 224 314 IPR018108 -
Bpe11g01176 322 PANTHER MITOFERRIN-LIKE 2 321 - -
Bpe11g01176 322 Pfam Mitochondrial carrier protein 225 319 IPR018108 -
Bpe11g01176 322 Pfam Mitochondrial carrier protein 129 215 IPR018108 -
Bpe11g01176 322 Pfam Mitochondrial carrier protein 37 123 IPR018108 -
Bpe11g01176 322 PANTHER MITOFERRIN-1-RELATED 2 321 - -
Bpe11g01176 322 PRINTS Mitochondrial carrier protein signature 51 65 IPR002067 GO:0055085
Bpe11g01176 322 PRINTS Mitochondrial carrier protein signature 185 203 IPR002067 GO:0055085
Bpe11g01176 322 PRINTS Mitochondrial carrier protein signature 143 161 IPR002067 GO:0055085
Bpe11g01176 322 PRINTS Mitochondrial carrier protein signature 38 51 IPR002067 GO:0055085
Bpe11g01176 322 PRINTS Mitochondrial carrier protein signature 233 255 IPR002067 GO:0055085
Bpe11g01176 322 ProSiteProfiles Solute carrier (Solcar) repeat profile. 33 121 IPR018108 -
Bpe11g01176 322 ProSiteProfiles Solute carrier (Solcar) repeat profile. 128 212 IPR018108 -
Bpe11g01176 322 Gene3D Mitochondrial carrier domain 130 322 IPR023395 -
Bpe11g01176 322 SUPERFAMILY Mitochondrial carrier 35 309 IPR023395 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe08g01410 Bpe-Chr8:14948104 Bpe11g01176 Bpe-Chr11:8717744 8.53E-160 dispersed
Bpe11g01176 Bpe-Chr11:8717744 Bpe13g00001 Bpe-Chr13:1252 4.74E-35 dispersed
Bpe11g01176 Bpe-Chr11:8717744 Bpe14g00335 Bpe-Chr14:3244967 1.20E-29 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g01176 K15113 - jre:108982304 521.931