Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g01181 ATGGCGTTTCTGTTTATACCCATGTGTAGATCATTTTCCAAGTTCTTCACCTTTTACATTTTGATCGCGCTCGTTCTTTTTTCCACCAGCTTTACTTCAACAGAAGCGTATGATGCACTTGATCCAAATGGAAACATCACTATCAAATGGGATATTATCAGTTGGACTGCCGATGGCTATGTTGCTATGGTGACAGTATACAATTTTCAGCAATATCGCCACATTCAAGCACCGGGTTGGTCGCTGGGATGGACGTGGGCGAAGAAGGAGGTAATCTGGAGTATGGTGGGAGGTCAGGCTACCGAGCAAGGAGATTGCTTGAGATTTAAGGGAAATATTCCACACTGCTGCAAAAAGGCCCCGACTATTGTCGATCTTCTGCCGGGAACTCCTTACAATCAACAAGTAGCAAATTGTTGTAAAGCTGGAGTACTCTCCTCGTGGGTCCAAGATCCGGCCAATGCAGCTAGCTCGTTTCAGATCAGTGTCGGTTCTTCGGGAACCACGAATAAGACAGTGAGAGTGCCTAAGAACTTCACTTTGCAAGCGCCAGGGCCTGGTTATACTTGTGGACCTGGAAAGATAGTTAAACCAACTAAATTTATGTCTGCAGATAACAGAAGAGTCACACAAGCGTTGATGACGTGGAATGTGACCTGCACATATTCGCAATTTCTGGCCCAGAGAACTCCTACTTGTTGTGTCTCATTCTCATCTTTCTACAATTCTACGATCGTCCCCTGTTCGACATGTTCCTGTGGCTGCCAAAGCAATATGAGCAAATCAGGGGGCTGTATCGGGGAAAATTCTTTATATTTAGCCTCCGTTGTTCAAGATTCTGGGCAAAATACTGCCCCTCTAGTTCAATGCACAAGCCATATGTGCCCAATTAGAGTTCATTGGCATGTCAAACTCAACTACAAAGAATACTGGCGGGTTAAGATTACCGTCACGAACTTCAACTACCGGATGAACTATTCCAACTGGAATTTGGTTCTTCAACATCCCAACTTCGACAATCTGACCCAGATTTTCAGTTTCAACTATGAATCACTAAATCCTTATACAACAATAAATGATACTGGAATGCTGTGGGGAATCAAGTTTTACAATGATTTTCTCATGGAAGCAGGCCCTCTCGGCAATGTGCAGTCGGAGCTACTCTTTCGTAAAGATTCAACCTTTACGTTTGGCAAAGGCTGGGCTTTTCCTAGAAGGGTTTATTTTAATGGTGACAACTGTGTCATGCCGCCTCCGGACGCCTATCCATGGCTACCAAATGCCAGTTCGGGCCTTGAAATTTCGTTTGTTACCTCTCTATTGACTTTTGTTTGTGCGTTGATAGTCATGTACTTTTGCCATGTAACACCTTTCTTGGTAAAGTAG 1386 44.01 MAFLFIPMCRSFSKFFTFYILIALVLFSTSFTSTEAYDALDPNGNITIKWDIISWTADGYVAMVTVYNFQQYRHIQAPGWSLGWTWAKKEVIWSMVGGQATEQGDCLRFKGNIPHCCKKAPTIVDLLPGTPYNQQVANCCKAGVLSSWVQDPANAASSFQISVGSSGTTNKTVRVPKNFTLQAPGPGYTCGPGKIVKPTKFMSADNRRVTQALMTWNVTCTYSQFLAQRTPTCCVSFSSFYNSTIVPCSTCSCGCQSNMSKSGGCIGENSLYLASVVQDSGQNTAPLVQCTSHMCPIRVHWHVKLNYKEYWRVKITVTNFNYRMNYSNWNLVLQHPNFDNLTQIFSFNYESLNPYTTINDTGMLWGIKFYNDFLMEAGPLGNVQSELLFRKDSTFTFGKGWAFPRRVYFNGDNCVMPPPDAYPWLPNASSGLEISFVTSLLTFVCALIVMYFCHVTPFLVK 461
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 8759675 8762282 - Bpe004507.1 Bpe11g01181 111326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g01181 461 PIRSF COBRA 8 455 IPR006918 GO:0010215|GO:0031225
Bpe11g01181 461 Pfam COBRA-like protein 60 223 IPR006918 GO:0010215|GO:0031225
Bpe11g01181 461 PANTHER COBRA-LIKE PROTEIN 10 451 - -
Bpe11g01181 461 PANTHER PROTEIN COBRA 10 451 IPR006918 GO:0010215|GO:0031225
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe07g00746 Bpe-Chr7:13997688 Bpe11g01181 Bpe-Chr11:8759675 0 dispersed
Bpe08g01136 Bpe-Chr8:13244013 Bpe11g01181 Bpe-Chr11:8759675 1.71E-38 dispersed
Bpe11g00048 Bpe-Chr11:347099 Bpe11g01181 Bpe-Chr11:8759675 0 dispersed
Bpe11g01181 Bpe-Chr11:8759675 Bpe12g00518 Bpe-Chr12:11027190 0 dispersed
Bpe11g00047 Bpe-Chr11:339267 Bpe11g01181 Bpe-Chr11:8759675 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g01181 - - nnu:104599627 774.237