Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bpe11g01184 | ATGGGTTCCGTTTGCTGCTGTTTAAACTTTGGAAATTTCGAAGATAATGTTAATCCAGACAATCCAGCATATGGGAACTGTATATGTCTTAGCTGCTTTGTTAATAACTTCTCAAATGTGTATACATCACTTTTCAGAAGAGGGGAAGTGCATTCCTTTTCTACATCTATTCAGGGGGTGACATCTTTGACTTCCACTGCATCTTTTGACAACTCCTTGCCTGATATGTATCATTCTCCTCCATTTCCACTGCCTTATGATGCTGACCCAAGATATATCCACCTGCAACCCGATGGGCTAGTTTCAAGCCGTGAAAAGGGCTCTAGCCATTTGCACAGAGAATTGGAGCCTCTGAGTAGGGATATTGATATGGATATGGCTTTGAGGGCTGCTGACAAGTTGAATAGATCTACTGGTGAAGATGAATCTAGAGACGAGTTGAGGAAGTCCTTATTAAAATATTCTTCTGCGAAAAAATCCACTGCAGTTGAGAAACATTATGCATTTACGGAAGACGAGGATGCCTGTCCTACATGTCTTGAAGAATATACTCCTGAAAATCCCAAGATTATGACCAAATGCTCTCATGATTTTCATCTTGGATGCATATATGAGTGGATGGAGAGAAGTGAAAGCTGCCCAGTTTGTGGGAAGGTATCATTCTTTATCCACCCTCTTTACTAG | 684 | 40.94 | MGSVCCCLNFGNFEDNVNPDNPAYGNCICLSCFVNNFSNVYTSLFRRGEVHSFSTSIQGVTSLTSTASFDNSLPDMYHSPPFPLPYDADPRYIHLQPDGLVSSREKGSSHLHRELEPLSRDIDMDMALRAADKLNRSTGEDESRDELRKSLLKYSSAKKSTAVEKHYAFTEDEDACPTCLEEYTPENPKIMTKCSHDFHLGCIYEWMERSESCPVCGKVSFFIHPLY | 227 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 8787907 | 8789286 | - | Bpe004510.1 | Bpe11g01184 | 111329 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bpe11g01184 | 227 | PANTHER | ZINC FINGER, RING/FYVE/PHD-TYPE | 1 | 222 | - | - | |
Bpe11g01184 | 227 | PANTHER | TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED | 1 | 222 | - | - | |
Bpe11g01184 | 227 | Pfam | RING-H2 zinc finger domain | 173 | 216 | IPR024766 | GO:0008270 | |
Bpe11g01184 | 227 | SMART | ring_2 | 176 | 216 | IPR001841 | - | |
Bpe11g01184 | 227 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 132 | 220 | IPR013083 | - | |
Bpe11g01184 | 227 | ProSiteProfiles | Zinc finger RING-type profile. | 176 | 216 | IPR001841 | - | |
Bpe11g01184 | 227 | SUPERFAMILY | RING/U-box | 168 | 223 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bpe11g00660 | Bpe-Chr11:5072254 | Bpe11g01184 | Bpe-Chr11:8787907 | 4.43E-25 | dispersed | |
Bpe11g01184 | Bpe-Chr11:8787907 | Bpe14g00823 | Bpe-Chr14:6213414 | 1.39E-47 | dispersed | |
Bpe11g00042 | Bpe-Chr11:302999 | Bpe11g01184 | Bpe-Chr11:8787907 | 2.53E-114 | wgd | |
Bpe11g01184 | Bpe-Chr11:8787907 | Bpe02g01427 | Bpe-Chr2:17702522 | 6.14E-103 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bpe11g01184 | - | - | zju:107416681 | 313.153 |