Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g01184 ATGGGTTCCGTTTGCTGCTGTTTAAACTTTGGAAATTTCGAAGATAATGTTAATCCAGACAATCCAGCATATGGGAACTGTATATGTCTTAGCTGCTTTGTTAATAACTTCTCAAATGTGTATACATCACTTTTCAGAAGAGGGGAAGTGCATTCCTTTTCTACATCTATTCAGGGGGTGACATCTTTGACTTCCACTGCATCTTTTGACAACTCCTTGCCTGATATGTATCATTCTCCTCCATTTCCACTGCCTTATGATGCTGACCCAAGATATATCCACCTGCAACCCGATGGGCTAGTTTCAAGCCGTGAAAAGGGCTCTAGCCATTTGCACAGAGAATTGGAGCCTCTGAGTAGGGATATTGATATGGATATGGCTTTGAGGGCTGCTGACAAGTTGAATAGATCTACTGGTGAAGATGAATCTAGAGACGAGTTGAGGAAGTCCTTATTAAAATATTCTTCTGCGAAAAAATCCACTGCAGTTGAGAAACATTATGCATTTACGGAAGACGAGGATGCCTGTCCTACATGTCTTGAAGAATATACTCCTGAAAATCCCAAGATTATGACCAAATGCTCTCATGATTTTCATCTTGGATGCATATATGAGTGGATGGAGAGAAGTGAAAGCTGCCCAGTTTGTGGGAAGGTATCATTCTTTATCCACCCTCTTTACTAG 684 40.94 MGSVCCCLNFGNFEDNVNPDNPAYGNCICLSCFVNNFSNVYTSLFRRGEVHSFSTSIQGVTSLTSTASFDNSLPDMYHSPPFPLPYDADPRYIHLQPDGLVSSREKGSSHLHRELEPLSRDIDMDMALRAADKLNRSTGEDESRDELRKSLLKYSSAKKSTAVEKHYAFTEDEDACPTCLEEYTPENPKIMTKCSHDFHLGCIYEWMERSESCPVCGKVSFFIHPLY 227
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 8787907 8789286 - Bpe004510.1 Bpe11g01184 111329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g01184 227 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 1 222 - -
Bpe11g01184 227 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 1 222 - -
Bpe11g01184 227 Pfam RING-H2 zinc finger domain 173 216 IPR024766 GO:0008270
Bpe11g01184 227 SMART ring_2 176 216 IPR001841 -
Bpe11g01184 227 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 132 220 IPR013083 -
Bpe11g01184 227 ProSiteProfiles Zinc finger RING-type profile. 176 216 IPR001841 -
Bpe11g01184 227 SUPERFAMILY RING/U-box 168 223 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe11g00660 Bpe-Chr11:5072254 Bpe11g01184 Bpe-Chr11:8787907 4.43E-25 dispersed
Bpe11g01184 Bpe-Chr11:8787907 Bpe14g00823 Bpe-Chr14:6213414 1.39E-47 dispersed
Bpe11g00042 Bpe-Chr11:302999 Bpe11g01184 Bpe-Chr11:8787907 2.53E-114 wgd
Bpe11g01184 Bpe-Chr11:8787907 Bpe02g01427 Bpe-Chr2:17702522 6.14E-103 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g01184 - - zju:107416681 313.153