Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bpe11g01195 ATGAAGATTGGAGAAGAGATTATCTGTTTTGTGGCATTGTTCTTGTTTTGGACTTCTGCAGACGCATTGTTGTCTCCTAAAGGTGTAAACTTTGAAGTTCAAGCATTAATGGGTATAAAAGCTTCTCTCAAAGATCCTCATGGAGTTCTTGAAAACTGGGATGGAGACTCAGTCGATCCATGTAGCTGGACTATGGTCACTTGTTCAGCTGAGAGCTTCGTGATTGGACTGGGAACTCCAAGCCAGAATTTAGCTGGAACTCTCTCCCCAAGCATAGGAAACCTAACAAATCTTCAGATAGTGCTTTTACAGAACAACAATATAACAGGTCCAATTCCTTCTGAGATTGGGAAGCTTTCAATGCTTCATACACTTGATCTTTCTAATAACTTCTTCAATGGAGAAATTCCTTCTTCTCTGAGTAATCTTAGAAATCTTCAGTACTTGAGGCTAAATAATAACAGTCTTTCTGGGCAATTTCCTATGAACTTGGCAAACATGACTCAGCTAGCTTTTCTTGATTTATCCTACAATAATCTCACTGGCCCTGTCCCCAGATTTCCGAGCAAAACATTCAACATTGTTGGAAATCCTCTGATCTGTGCTACAGGGTCTGAAGCTGAATGCACCCCAACTCTAATGCCAATGTCCATGAATTTGAACAGCTCTCAATCTGATTTATCGCTGAACAGACCGAAAAAACACAAAATGGCCCTTGCAATAGCCTCTGCTCTCACCTGCCTCTGTTTGATTTCTCTTGGATTTGGACTGTTTCTATGGTGGAAACATAAATACAACAAACAAATTTTCTTCGATGTAAAGGACCGAAATCACGAGGAGACCCATCTTGGAAACCTGAAGAGGTTTCAATTCAGGGAGCTTCAAATAGCGACTCGAAATTTCAGCAGCAAAAACATACTTGGAAAAGGAGGATTTGGAAATGTGTACAAAGGAATTCTCAGTGATGGAGGTATAGTAGCTGTGAAGAGGCTCAAAGATGGTAACGCCATTGGAGGTGAAGTACAGTTTCAGACTGAAGTTGAGATGATCAGCCTAGCTGTTCATAGAAATCTCTTAAGACTATACGGGTTTTGTATAACGCCCACCGAAAGACTCCTTGTCTATCCGTACATGCCAAACGGAAGCGTAGCCTCTCGTCTTAAAGGAAAGCCAATATTGGAATGGGTGACGAGGAAGAGGATCGCAATAGGGGCAGCAAGGGGATTATTGTATTTGCATGAGCAATGTGATCCGAAAATAATACATAGGGACGTAAAAGCCGCTAATATTTTGCTAGACGAGTATTGTGAAGCTGTAGTGGGAGATTTTGGATTGGCAAAGCTTTTGGATCATCAAGATTCGCACGTCACAACGGCCGTGAGAGGAACTGTGGGCCACATGGCCCCAGAATATCTTTCAACGGGCCAGTCGTCTGAAAAGACGGATGTTTTTGGCTTTGGAATTCTCCTGCTAGAGCTCATTACAGGTCAAAGAGCACTTGAATTTGGGAAATCAGCTAATCAGAAAGGAGCAGTTCTTGATTGGGTGAGAAAGATACAGCAAGAAAAGAAACTCGAGGTGCTCGTGGACAAGGATTTGAAGGGCAATTACGATCGGATTGAGCTCGAGGAGATTGTTCAAGTGGCGCTCCTCTGCACCCAATATCTTCCTGTCCACAGGCCTAAAATGTCTGAAGTTGTGAGAATGCTTGAAGGGGATGGTCTTGCTGTGAGGTGGGAAGCTTCTCAGAAAGTCGACCCTGCAAAGGGCAAGCCTCCCGAATTCTCCTCCTCCGATCGATTTTCCGATCTCACTGATGACTCTTCCCTACTAGTTCAAGCAATGGAGCTCTCAGGTCCCAGGTAA 1866 43.35 MKIGEEIICFVALFLFWTSADALLSPKGVNFEVQALMGIKASLKDPHGVLENWDGDSVDPCSWTMVTCSAESFVIGLGTPSQNLAGTLSPSIGNLTNLQIVLLQNNNITGPIPSEIGKLSMLHTLDLSNNFFNGEIPSSLSNLRNLQYLRLNNNSLSGQFPMNLANMTQLAFLDLSYNNLTGPVPRFPSKTFNIVGNPLICATGSEAECTPTLMPMSMNLNSSQSDLSLNRPKKHKMALAIASALTCLCLISLGFGLFLWWKHKYNKQIFFDVKDRNHEETHLGNLKRFQFRELQIATRNFSSKNILGKGGFGNVYKGILSDGGIVAVKRLKDGNAIGGEVQFQTEVEMISLAVHRNLLRLYGFCITPTERLLVYPYMPNGSVASRLKGKPILEWVTRKRIAIGAARGLLYLHEQCDPKIIHRDVKAANILLDEYCEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHMAPEYLSTGQSSEKTDVFGFGILLLELITGQRALEFGKSANQKGAVLDWVRKIQQEKKLEVLVDKDLKGNYDRIELEEIVQVALLCTQYLPVHRPKMSEVVRMLEGDGLAVRWEASQKVDPAKGKPPEFSSSDRFSDLTDDSSLLVQAMELSGPR 621
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 8910403 8913405 - Bpe004521.1 Bpe11g01195 111340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bpe11g01195 621 MobiDBLite consensus disorder prediction 582 607 - -
Bpe11g01195 621 ProSitePatterns Serine/Threonine protein kinases active-site signature. 420 432 IPR008271 GO:0004672|GO:0006468
Bpe11g01195 621 Pfam Protein kinase domain 302 567 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe11g01195 621 SMART serkin_6 301 570 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe11g01195 621 Pfam Leucine rich repeat N-terminal domain 32 69 IPR013210 -
Bpe11g01195 621 Pfam Leucine rich repeat 122 180 IPR001611 GO:0005515
Bpe11g01195 621 SUPERFAMILY Protein kinase-like (PK-like) 278 571 IPR011009 -
Bpe11g01195 621 ProSitePatterns Protein kinases ATP-binding region signature. 307 329 IPR017441 GO:0005524
Bpe11g01195 621 Gene3D Phosphorylase Kinase; domain 1 270 377 - -
Bpe11g01195 621 PANTHER PROTEIN NSP-INTERACTING KINASE 1-LIKE ISOFORM X1 6 621 - -
Bpe11g01195 621 ProSiteProfiles Protein kinase domain profile. 301 556 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bpe11g01195 621 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 6 621 - -
Bpe11g01195 621 Gene3D Transferase(Phosphotransferase) domain 1 378 589 - -
Bpe11g01195 621 Gene3D Ribonuclease Inhibitor 29 211 IPR032675 -
Bpe11g01195 621 SUPERFAMILY L domain-like 32 203 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bpe08g00675 Bpe-Chr8:7434258 Bpe11g01195 Bpe-Chr11:8910403 0 dispersed
Bpe08g00760 Bpe-Chr8:9315941 Bpe11g01195 Bpe-Chr11:8910403 1.80E-126 dispersed
Bpe11g01195 Bpe-Chr11:8910403 Bpe15g00442 Bpe-Chr15:15880815 0 dispersed
Bpe12g00396 Bpe-Chr12:9385182 Bpe11g01195 Bpe-Chr11:8910403 2.13E-57 dispersed
Bpe11g01195 Bpe-Chr11:8910403 Bpe13g00502 Bpe-Chr13:12415241 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
63592 PF00069 Pkinase 4.50E-44 CL0016 Bpe PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bpe11g01195 - - jre:109001893 1006.13